Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte5a08
(734 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024751-13|AAK21512.2| 488|Caenorhabditis elegans Hypothetical... 90 1e-18
Z75714-6|CAE54930.1| 532|Caenorhabditis elegans Hypothetical pr... 82 5e-16
Z75714-5|CAB00065.2| 581|Caenorhabditis elegans Hypothetical pr... 82 5e-16
AF098994-5|AAC67473.3| 579|Caenorhabditis elegans Hypothetical ... 79 3e-15
AF098994-4|AAO21390.1| 606|Caenorhabditis elegans Hypothetical ... 79 3e-15
AF099003-2|AAC68743.2| 454|Caenorhabditis elegans Hypothetical ... 69 3e-12
AC024791-18|AAT81180.1| 438|Caenorhabditis elegans Hypothetical... 68 8e-12
AC024791-16|AAF60674.3| 468|Caenorhabditis elegans Hypothetical... 68 8e-12
AC024791-15|ABQ13056.1| 464|Caenorhabditis elegans Hypothetical... 68 8e-12
AF098994-3|AAT81188.1| 455|Caenorhabditis elegans Hypothetical ... 62 3e-10
AF098994-2|AAT81187.1| 505|Caenorhabditis elegans Hypothetical ... 62 3e-10
Z83122-4|CAB05602.2| 664|Caenorhabditis elegans Hypothetical pr... 58 5e-09
Z78413-12|CAB01666.3| 448|Caenorhabditis elegans Hypothetical p... 54 8e-08
Z78411-5|CAB01647.3| 448|Caenorhabditis elegans Hypothetical pr... 54 8e-08
Z71267-9|CAA95852.2| 380|Caenorhabditis elegans Hypothetical pr... 54 8e-08
Z71262-14|CAN99672.1| 380|Caenorhabditis elegans Hypothetical p... 54 8e-08
U80448-8|AAB37821.3| 1014|Caenorhabditis elegans Hypothetical pr... 37 0.017
Z81054-7|CAB02881.1| 472|Caenorhabditis elegans Hypothetical pr... 33 0.21
AF003137-3|AAB93640.1| 625|Caenorhabditis elegans Hypothetical ... 31 0.64
AC084161-2|AAK29732.3| 782|Caenorhabditis elegans Hypothetical ... 31 0.85
AF078790-2|AAC26940.1| 215|Caenorhabditis elegans Hypothetical ... 31 1.1
>AC024751-13|AAK21512.2| 488|Caenorhabditis elegans Hypothetical
protein Y18H1A.9 protein.
Length = 488
Score = 90.2 bits (214), Expect = 1e-18
Identities = 59/206 (28%), Positives = 98/206 (47%), Gaps = 15/206 (7%)
Frame = +3
Query: 144 VWEVRFIREGQRRFVKSLDTHGA-ITIWK---EENSTMDIMVDGPRITQIAGMLHEREIP 311
VW V+ + Q + +L + + WK E + +M+ + Q L + I
Sbjct: 23 VWRVQPTTQDQVDILHNLYLNDVKLDFWKSPSEAGKEVHVMISDEKTQQFMKELDDHSIK 82
Query: 312 YSIAIGDVGSVL--SREQGIKYSKNNRKPNYCEM----DWHNYHRLHVIYAFMENLSHEY 473
+S+ I DV V+ +E+ K K R ++ E + YH + ++ +L+ Y
Sbjct: 83 HSVMIDDVQKVIVEQKEKRDKLRKQVRLHDWREQKVQFNLAQYHSFADVINYLNSLAITY 142
Query: 474 PYLCSVAVIGKSAEGRDIKILKVSNGNEYNV--GVWLDAAIHPREWISTAVVTYIADRLV 647
P L SV IG + EGR I ++K++N G+W+D IH REW+S + V Y +LV
Sbjct: 143 PELVSVQPIGTTHEGRQIPLIKITNKRNGGTKRGIWVDGGIHAREWVSPSTVLYFIHQLV 202
Query: 648 RTFHEQ---PDCVTNKDWYILPVLNP 716
+ + V +WYI+P+LNP
Sbjct: 203 TQYDKDVQIKQFVDQLEWYIVPLLNP 228
>Z75714-6|CAE54930.1| 532|Caenorhabditis elegans Hypothetical
protein ZC434.9b protein.
Length = 532
Score = 81.8 bits (193), Expect = 5e-16
Identities = 52/172 (30%), Positives = 85/172 (49%), Gaps = 15/172 (8%)
Frame = +3
Query: 246 DIMVDGPRITQIAGMLHEREIPYSIAIGDVGS-VLSREQG------IKYSK--NNRKPNY 398
DIMVD R+ + +L I Y + I DVG +L +E G + +SK +N N
Sbjct: 74 DIMVDEDRMEWLDSVLKNSNISYDVIIEDVGKLILEKEHGPPRFSNLLFSKRMHNEGGNR 133
Query: 399 CEMDWHNYHRLHVIYAFMENLSHEYPYLCSVAVIGKSAEGRDIKILKVSN---GNEYNVG 569
+ YH I +M+++ +YP V +G ++EGR I+ +K+ + N+ +
Sbjct: 134 ARYGFGEYHSYQTICDWMKDIERKYPDKAKVFTMGTTSEGRPIQGIKIGSQVWRNDKRI- 192
Query: 570 VWLDAAIHPREWISTAVVTYIADRLVRTFHEQP---DCVTNKDWYILPVLNP 716
W+D IH REW + + DRL+ +++ V ++YILPV NP
Sbjct: 193 FWIDGGIHAREWAAVHTALWFIDRLIADYNDDSLVRAAVDRLNFYILPVANP 244
>Z75714-5|CAB00065.2| 581|Caenorhabditis elegans Hypothetical
protein ZC434.9a protein.
Length = 581
Score = 81.8 bits (193), Expect = 5e-16
Identities = 52/172 (30%), Positives = 85/172 (49%), Gaps = 15/172 (8%)
Frame = +3
Query: 246 DIMVDGPRITQIAGMLHEREIPYSIAIGDVGS-VLSREQG------IKYSK--NNRKPNY 398
DIMVD R+ + +L I Y + I DVG +L +E G + +SK +N N
Sbjct: 74 DIMVDEDRMEWLDSVLKNSNISYDVIIEDVGKLILEKEHGPPRFSNLLFSKRMHNEGGNR 133
Query: 399 CEMDWHNYHRLHVIYAFMENLSHEYPYLCSVAVIGKSAEGRDIKILKVSN---GNEYNVG 569
+ YH I +M+++ +YP V +G ++EGR I+ +K+ + N+ +
Sbjct: 134 ARYGFGEYHSYQTICDWMKDIERKYPDKAKVFTMGTTSEGRPIQGIKIGSQVWRNDKRI- 192
Query: 570 VWLDAAIHPREWISTAVVTYIADRLVRTFHEQP---DCVTNKDWYILPVLNP 716
W+D IH REW + + DRL+ +++ V ++YILPV NP
Sbjct: 193 FWIDGGIHAREWAAVHTALWFIDRLIADYNDDSLVRAAVDRLNFYILPVANP 244
>AF098994-5|AAC67473.3| 579|Caenorhabditis elegans Hypothetical
protein T06A4.1a protein.
Length = 579
Score = 79.0 bits (186), Expect = 3e-15
Identities = 49/159 (30%), Positives = 79/159 (49%), Gaps = 6/159 (3%)
Frame = +3
Query: 258 DGPRITQIAGMLHEREIPYSIAIGDVGSVLSREQGIKYSKNNRKPNYCEMDWHNYHRLHV 437
D PR + L ++I Y +A+ D+ + E+G S P + Y+ L
Sbjct: 81 DAPRFVKD---LESKKISYIVAVNDLSKAIENERG---SDKFYNP-VAGFAYDKYNSLEE 133
Query: 438 IYAFMENLSHEYPYLCSVAVIGKSAEGRDIKILKVS---NGNEYNVGVWLDAAIHPREWI 608
I M+ L EYP + ++ IG+S E R + ++K++ N + +W+DA IH REWI
Sbjct: 134 IQTEMKRLKKEYPTMITLIDIGQSHENRTLLVMKITGKRNPLGSKISMWIDAGIHAREWI 193
Query: 609 STAVVTYIADRLVRTFHEQ---PDCVTNKDWYILPVLNP 716
+ A YIA L+ + + + D+YILPV+NP
Sbjct: 194 APATAMYIAHELLLGYENDATVAKLMDHIDFYILPVMNP 232
>AF098994-4|AAO21390.1| 606|Caenorhabditis elegans Hypothetical
protein T06A4.1b protein.
Length = 606
Score = 79.0 bits (186), Expect = 3e-15
Identities = 49/159 (30%), Positives = 79/159 (49%), Gaps = 6/159 (3%)
Frame = +3
Query: 258 DGPRITQIAGMLHEREIPYSIAIGDVGSVLSREQGIKYSKNNRKPNYCEMDWHNYHRLHV 437
D PR + L ++I Y +A+ D+ + E+G S P + Y+ L
Sbjct: 81 DAPRFVKD---LESKKISYIVAVNDLSKAIENERG---SDKFYNP-VAGFAYDKYNSLEE 133
Query: 438 IYAFMENLSHEYPYLCSVAVIGKSAEGRDIKILKVS---NGNEYNVGVWLDAAIHPREWI 608
I M+ L EYP + ++ IG+S E R + ++K++ N + +W+DA IH REWI
Sbjct: 134 IQTEMKRLKKEYPTMITLIDIGQSHENRTLLVMKITGKRNPLGSKISMWIDAGIHAREWI 193
Query: 609 STAVVTYIADRLVRTFHEQ---PDCVTNKDWYILPVLNP 716
+ A YIA L+ + + + D+YILPV+NP
Sbjct: 194 APATAMYIAHELLLGYENDATVAKLMDHIDFYILPVMNP 232
>AF099003-2|AAC68743.2| 454|Caenorhabditis elegans Hypothetical
protein Y59C2A.1 protein.
Length = 454
Score = 69.3 bits (162), Expect = 3e-12
Identities = 51/183 (27%), Positives = 86/183 (46%), Gaps = 15/183 (8%)
Frame = +3
Query: 213 ITIWKE---ENSTMDIMVDGPRITQIAGMLHEREIP-YSIAIGDVGSVLSREQG--IKYS 374
I IW E +N DI+V + + +L E+ + GD+ S ++ E+ I+ S
Sbjct: 69 IDIWAEPSKQNPYADILVAPEFLQKFKSLLTSAELSTLKMLEGDIQSQINAERHAMIRNS 128
Query: 375 KNNRK---PNYCEMDWHNYHRLHVIYAFMENLSHEYPYLCSVAVIGKSAEGRDIKILKV- 542
RK + E D + YH + + FM+ LS + + + + S+EGR I +K+
Sbjct: 129 VRRRKRAMKTWQEFDTNAYHSYNEMVEFMKLLSEQKSDMVEMVKVATSSEGRSIYGVKIH 188
Query: 543 --SNGNEYNVGVWLDAAIHPREWISTAVVTYIADRLVRTFHEQPDCVTNK---DWYILPV 707
+ +DA +H REWI+ AV ++ ++V + P N DWYI+P
Sbjct: 189 PPGPSPPEKPSIIVDAGVHAREWIAPAVGLFMIRKIVEEYGRNPQVTANLQKFDWYIMPQ 248
Query: 708 LNP 716
+NP
Sbjct: 249 VNP 251
>AC024791-18|AAT81180.1| 438|Caenorhabditis elegans Hypothetical
protein Y47G6A.19b protein.
Length = 438
Score = 67.7 bits (158), Expect = 8e-12
Identities = 48/175 (27%), Positives = 81/175 (46%), Gaps = 14/175 (8%)
Frame = +3
Query: 234 NSTMDIMVDGPRITQIAGMLHEREIPYSIAIGDVGSVLSREQGIKYSKNNR-----KPNY 398
N T+DIMV Q L + + +AI D+ +L ++G + +N K +
Sbjct: 23 NGTVDIMVAPEHTDQFRQYLEKHGYTFQVAIDDLHKLLIEKEGNLSTHSNDDAFFLKRLH 82
Query: 399 CEMDWHN------YHRLHVIYAFMENLSHEYPYLCSVAVIGKSAEGRDIKILKVSNGNEY 560
++ +H+ Y+ V+ ++E ++ P + + +G + EGRDI LK
Sbjct: 83 DDVGFHSRLRMGEYYSYSVLSTWLERIAENMPDIAKLIKVGTTIEGRDILGLKFGKDTPD 142
Query: 561 NVGVWLDAAIHPREWISTAVVTYIADRLVRTFHEQP---DCVTNKDWYILPVLNP 716
V +DA IH REW + +Y + +V E P + + N YI+PVLNP
Sbjct: 143 KKIVVIDAGIHAREWAAIHTASYFINLIVNGREEDPQIQNYLDNIVLYIIPVLNP 197
>AC024791-16|AAF60674.3| 468|Caenorhabditis elegans Hypothetical
protein Y47G6A.19a protein.
Length = 468
Score = 67.7 bits (158), Expect = 8e-12
Identities = 48/175 (27%), Positives = 81/175 (46%), Gaps = 14/175 (8%)
Frame = +3
Query: 234 NSTMDIMVDGPRITQIAGMLHEREIPYSIAIGDVGSVLSREQGIKYSKNNR-----KPNY 398
N T+DIMV Q L + + +AI D+ +L ++G + +N K +
Sbjct: 23 NGTVDIMVAPEHTDQFRQYLEKHGYTFQVAIDDLHKLLIEKEGNLSTHSNDDAFFLKRLH 82
Query: 399 CEMDWHN------YHRLHVIYAFMENLSHEYPYLCSVAVIGKSAEGRDIKILKVSNGNEY 560
++ +H+ Y+ V+ ++E ++ P + + +G + EGRDI LK
Sbjct: 83 DDVGFHSRLRMGEYYSYSVLSTWLERIAENMPDIAKLIKVGTTIEGRDILGLKFGKDTPD 142
Query: 561 NVGVWLDAAIHPREWISTAVVTYIADRLVRTFHEQP---DCVTNKDWYILPVLNP 716
V +DA IH REW + +Y + +V E P + + N YI+PVLNP
Sbjct: 143 KKIVVIDAGIHAREWAAIHTASYFINLIVNGREEDPQIQNYLDNIVLYIIPVLNP 197
>AC024791-15|ABQ13056.1| 464|Caenorhabditis elegans Hypothetical
protein Y47G6A.19c protein.
Length = 464
Score = 67.7 bits (158), Expect = 8e-12
Identities = 48/175 (27%), Positives = 81/175 (46%), Gaps = 14/175 (8%)
Frame = +3
Query: 234 NSTMDIMVDGPRITQIAGMLHEREIPYSIAIGDVGSVLSREQGIKYSKNNR-----KPNY 398
N T+DIMV Q L + + +AI D+ +L ++G + +N K +
Sbjct: 23 NGTVDIMVAPEHTDQFRQYLEKHGYTFQVAIDDLHKLLIEKEGNLSTHSNDDAFFLKRLH 82
Query: 399 CEMDWHN------YHRLHVIYAFMENLSHEYPYLCSVAVIGKSAEGRDIKILKVSNGNEY 560
++ +H+ Y+ V+ ++E ++ P + + +G + EGRDI LK
Sbjct: 83 DDVGFHSRLRMGEYYSYSVLSTWLERIAENMPDIAKLIKVGTTIEGRDILGLKFGKDTPD 142
Query: 561 NVGVWLDAAIHPREWISTAVVTYIADRLVRTFHEQP---DCVTNKDWYILPVLNP 716
V +DA IH REW + +Y + +V E P + + N YI+PVLNP
Sbjct: 143 KKIVVIDAGIHAREWAAIHTASYFINLIVNGREEDPQIQNYLDNIVLYIIPVLNP 197
>AF098994-3|AAT81188.1| 455|Caenorhabditis elegans Hypothetical
protein T06A4.3b protein.
Length = 455
Score = 62.5 bits (145), Expect = 3e-10
Identities = 44/190 (23%), Positives = 79/190 (41%), Gaps = 10/190 (5%)
Frame = +3
Query: 177 RRFVKSLDTHGAITIWK---EENSTMDIMVDGPRITQIAGMLHEREIPYSIAIGDVGSVL 347
+R K+ H + WK +++ D+MVD L +I Y I DV ++
Sbjct: 40 QRLYKNATDHD-LNFWKTGKDKHGFWDVMVDMKNSKYFLDFLQVNDISYIKTIDDVEGLI 98
Query: 348 SREQGIKYSKNN-----RKPNYCEMDWHNYHRLHVIYAFMENLSHEYPYLCSVAVIGKSA 512
++ + K N + D+H Y + +M+ L +YP + IGK+
Sbjct: 99 TKHENNKTLSNMFPRLWDDSSSAHYDFHTYGSYQRMTDWMKQLVVKYPKMVQYISIGKTT 158
Query: 513 EGRDIKILKVSNGNEYNVGVWLDAAIHPREWISTAVVTYIADRLVRTFHEQ--PDCVTNK 686
EGR+I +++ + W+D IH REW + + +L +E +
Sbjct: 159 EGRNIDGVEIGGDSRTKKIFWIDGGIHAREWAAPHTALFFIHQLTSRANEPGIKKLLNEI 218
Query: 687 DWYILPVLNP 716
+ ++P LNP
Sbjct: 219 TFVVVPCLNP 228
>AF098994-2|AAT81187.1| 505|Caenorhabditis elegans Hypothetical
protein T06A4.3a protein.
Length = 505
Score = 62.5 bits (145), Expect = 3e-10
Identities = 44/190 (23%), Positives = 79/190 (41%), Gaps = 10/190 (5%)
Frame = +3
Query: 177 RRFVKSLDTHGAITIWK---EENSTMDIMVDGPRITQIAGMLHEREIPYSIAIGDVGSVL 347
+R K+ H + WK +++ D+MVD L +I Y I DV ++
Sbjct: 40 QRLYKNATDHD-LNFWKTGKDKHGFWDVMVDMKNSKYFLDFLQVNDISYIKTIDDVEGLI 98
Query: 348 SREQGIKYSKNN-----RKPNYCEMDWHNYHRLHVIYAFMENLSHEYPYLCSVAVIGKSA 512
++ + K N + D+H Y + +M+ L +YP + IGK+
Sbjct: 99 TKHENNKTLSNMFPRLWDDSSSAHYDFHTYGSYQRMTDWMKQLVVKYPKMVQYISIGKTT 158
Query: 513 EGRDIKILKVSNGNEYNVGVWLDAAIHPREWISTAVVTYIADRLVRTFHEQ--PDCVTNK 686
EGR+I +++ + W+D IH REW + + +L +E +
Sbjct: 159 EGRNIDGVEIGGDSRTKKIFWIDGGIHAREWAAPHTALFFIHQLTSRANEPGIKKLLNEI 218
Query: 687 DWYILPVLNP 716
+ ++P LNP
Sbjct: 219 TFVVVPCLNP 228
>Z83122-4|CAB05602.2| 664|Caenorhabditis elegans Hypothetical
protein R11A5.7 protein.
Length = 664
Score = 58.4 bits (135), Expect = 5e-09
Identities = 30/94 (31%), Positives = 49/94 (52%), Gaps = 4/94 (4%)
Frame = +3
Query: 447 FMENLSHEYPYLCSVAVIGKSAEGRDIKILKVSNGNEYNV-GVWLDAAIHPREWISTAVV 623
+M + YP + + IG + EG+ I+ LK+ + + VW+D IH REW S+
Sbjct: 170 YMRTIEFYYPRIAKIVRIGATHEGKPIEGLKIGARSSHKKRAVWVDGNIHAREWASSHTA 229
Query: 624 TYIADRLVRTFHEQ---PDCVTNKDWYILPVLNP 716
Y ++LV + + + V D+YI+P LNP
Sbjct: 230 LYFINQLVSEYGKDAQITNYVDTLDFYIVPCLNP 263
>Z78413-12|CAB01666.3| 448|Caenorhabditis elegans Hypothetical
protein F02D8.4 protein.
Length = 448
Score = 54.4 bits (125), Expect = 8e-08
Identities = 25/67 (37%), Positives = 38/67 (56%)
Frame = +3
Query: 447 FMENLSHEYPYLCSVAVIGKSAEGRDIKILKVSNGNEYNVGVWLDAAIHPREWISTAVVT 626
F+ +L+ +YP + IG S EGR I +++++ VW+DA IH REWIS V
Sbjct: 128 FLNSLAQQYPNDVKLQNIGNSYEGRSITAVRIADDGSSKPIVWIDAGIHAREWISYNVAL 187
Query: 627 YIADRLV 647
Y+ +V
Sbjct: 188 YLIYTIV 194
>Z78411-5|CAB01647.3| 448|Caenorhabditis elegans Hypothetical
protein F02D8.4 protein.
Length = 448
Score = 54.4 bits (125), Expect = 8e-08
Identities = 25/67 (37%), Positives = 38/67 (56%)
Frame = +3
Query: 447 FMENLSHEYPYLCSVAVIGKSAEGRDIKILKVSNGNEYNVGVWLDAAIHPREWISTAVVT 626
F+ +L+ +YP + IG S EGR I +++++ VW+DA IH REWIS V
Sbjct: 128 FLNSLAQQYPNDVKLQNIGNSYEGRSITAVRIADDGSSKPIVWIDAGIHAREWISYNVAL 187
Query: 627 YIADRLV 647
Y+ +V
Sbjct: 188 YLIYTIV 194
>Z71267-9|CAA95852.2| 380|Caenorhabditis elegans Hypothetical
protein W01A8.6 protein.
Length = 380
Score = 54.4 bits (125), Expect = 8e-08
Identities = 29/96 (30%), Positives = 48/96 (50%), Gaps = 6/96 (6%)
Frame = +3
Query: 447 FMENLSHEYPYLCSVAVIGKSAEGRD---IKILKVSNGNEYNVGVWLDAAIHPREWISTA 617
+++ ++H+ P + IG++ EGR ++I K + + + VWLD H REW +
Sbjct: 44 YIKGVAHDNPSFVQLKTIGRTREGRPLLGVRIGKPALPGKRKIAVWLDGGNHAREWPAFH 103
Query: 618 VVTYIADRLVRTFHEQPDC---VTNKDWYILPVLNP 716
V Y ++LV + V D Y+ PVLNP
Sbjct: 104 VAVYFIEKLVNGYLSDDKITKYVETLDIYVFPVLNP 139
>Z71262-14|CAN99672.1| 380|Caenorhabditis elegans Hypothetical
protein W01A8.6 protein.
Length = 380
Score = 54.4 bits (125), Expect = 8e-08
Identities = 29/96 (30%), Positives = 48/96 (50%), Gaps = 6/96 (6%)
Frame = +3
Query: 447 FMENLSHEYPYLCSVAVIGKSAEGRD---IKILKVSNGNEYNVGVWLDAAIHPREWISTA 617
+++ ++H+ P + IG++ EGR ++I K + + + VWLD H REW +
Sbjct: 44 YIKGVAHDNPSFVQLKTIGRTREGRPLLGVRIGKPALPGKRKIAVWLDGGNHAREWPAFH 103
Query: 618 VVTYIADRLVRTFHEQPDC---VTNKDWYILPVLNP 716
V Y ++LV + V D Y+ PVLNP
Sbjct: 104 VAVYFIEKLVNGYLSDDKITKYVETLDIYVFPVLNP 139
>U80448-8|AAB37821.3| 1014|Caenorhabditis elegans Hypothetical
protein F59A3.1 protein.
Length = 1014
Score = 36.7 bits (81), Expect = 0.017
Identities = 28/115 (24%), Positives = 56/115 (48%), Gaps = 7/115 (6%)
Frame = +3
Query: 393 NYCEMDWHNYHRLHVIYAFMENLSHEYPYLCSVAVIGKSAEGRDIKILKVSN-GNEYNV- 566
N ++ HNY+ + A+++ YP + + GKS EGR++ +L +S+ E+ +
Sbjct: 72 NSTKLKNHNYNEMT---AWLKATRLNYPNITHLYSAGKSVEGRELWVLIISDKPKEHKLM 128
Query: 567 --GVWLDAAIHPREWISTAVVTYIADRLVRTFHEQ---PDCVTNKDWYILPVLNP 716
+ + +H E + V Y+A+ L + + D V N +++P +NP
Sbjct: 129 EPELKIVGNMHGNEVVGREAVLYLAEILCLNYGKNKYLTDLVNNARIHLMPSMNP 183
>Z81054-7|CAB02881.1| 472|Caenorhabditis elegans Hypothetical
protein F01D4.4 protein.
Length = 472
Score = 33.1 bits (72), Expect = 0.21
Identities = 25/113 (22%), Positives = 52/113 (46%), Gaps = 8/113 (7%)
Frame = +3
Query: 402 EMDWHNYHRLHVIYAFMENLSHEYPYLCSVAVIGKSAEGRDIKILKVSNGNEYNV----G 569
+ +W +YH + A + ++ + P + ++ IG+S EGR + +++ S ++
Sbjct: 34 DAEWGHYHNQAQLEAKLGEINEKCPEITTLYEIGQSVEGRPLVVIQFSTTPGEHIPTKPE 93
Query: 570 VWLDAAIHPREWISTAVVTYIADRL----VRTFHEQPDCVTNKDWYILPVLNP 716
V L +H E I ++ A+ L + E + + +ILP +NP
Sbjct: 94 VKLIGNMHGNEPIGRELLLRFAETLCNGAINNDKEIVQLLNSTSIHILPSMNP 146
>AF003137-3|AAB93640.1| 625|Caenorhabditis elegans Hypothetical
protein C27A12.2 protein.
Length = 625
Score = 31.5 bits (68), Expect = 0.64
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +3
Query: 387 KPNYCEMDWHNYHRLHVIYAFMENLSHEYPYLCS 488
KPN C + ++ + H + M+ +HE PY CS
Sbjct: 97 KPNVCSICNISFSQAHTLKTHMQQHAHEKPYKCS 130
>AC084161-2|AAK29732.3| 782|Caenorhabditis elegans Hypothetical
protein Y92H12A.4 protein.
Length = 782
Score = 31.1 bits (67), Expect = 0.85
Identities = 12/35 (34%), Positives = 21/35 (60%)
Frame = +1
Query: 457 ICHMNTLICARWPLLENLLKDEILRF*RYLMVMNI 561
+C+MN ++ WP L L K+++LR R + N+
Sbjct: 98 LCNMNMILFEVWPFLHLLCKEQLLRLIREAVRQNV 132
>AF078790-2|AAC26940.1| 215|Caenorhabditis elegans Hypothetical
protein F36H12.11 protein.
Length = 215
Score = 30.7 bits (66), Expect = 1.1
Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 6/56 (10%)
Frame = +3
Query: 576 LDAAI--HPREWISTAVVTYIADRLVRTFHEQPDC----VTNKDWYILPVLNPGWL 725
LD A+ P++ S A +T++ +L TF++QP N+D+ +NP W+
Sbjct: 110 LDKALAKEPKDTYSVASLTWLEKKLAATFYQQPPSHSYEEANEDFLAAYKVNPKWM 165
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,552,309
Number of Sequences: 27780
Number of extensions: 355412
Number of successful extensions: 812
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 771
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 788
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1724918872
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -