Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte5a04
         (735 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic pr...    23   2.6  
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           22   4.5  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    22   4.5  
AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esteras...    21   7.8  

>U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic
           protein protein.
          Length = 372

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 13/32 (40%), Positives = 15/32 (46%)
 Frame = +1

Query: 352 HAYYQHKVREIKEGKVPEPTAPPTMPSGQQRM 447
           HA  Q  V  +K  +VP P   PT   GQ  M
Sbjct: 317 HAIVQSLVNSMKPKEVPGPCCVPTQ-LGQMSM 347


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = -1

Query: 231 SDFRWWINNANDWRGWWRR 175
           S+ RW  NN N+    WR+
Sbjct: 372 SNNRWHNNNGNNSNNHWRK 390


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like protein
            protein.
          Length = 1156

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 10/29 (34%), Positives = 16/29 (55%), Gaps = 2/29 (6%)
 Frame = +1

Query: 355  AYYQH--KVREIKEGKVPEPTAPPTMPSG 435
            AY  H  K+  +K+G +P+P A  +   G
Sbjct: 1068 AYRHHLSKMHFVKDGVIPDPVALKSAQQG 1096



 Score = 21.4 bits (43), Expect = 7.8
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = +1

Query: 415 PPTMPSGQQRMGLAPATAA 471
           PPT+P+      L P TAA
Sbjct: 126 PPTLPAAAAAALLPPQTAA 144


>AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 14/56 (25%), Positives = 23/56 (41%), Gaps = 3/56 (5%)
 Frame = -1

Query: 627 TVSGDKLRG*FHYVELQSR---YRRWISDKFEIWWWVARRRQFCRSSCLEELLLAG 469
           T+ GD     FHY+  QSR   +R W      +  W    +   ++  L  ++  G
Sbjct: 194 TLFGDGTSANFHYLSPQSRGLFHRGWSMSGTMLVPWALMEQPLAQTKKLATIVGCG 249


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 157,679
Number of Sequences: 336
Number of extensions: 3221
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19675845
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)