Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte5a04
(735 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_02_0240 + 8196140-8198248,8198381-8198650 138 6e-33
06_03_1156 - 28069663-28070393,28070966-28071231,28072023-28072909 50 2e-06
01_06_0381 + 28878811-28879120,28880189-28880331,28880753-288815... 47 1e-05
09_02_0221 + 5962606-5963197,5963711-5963837,5963994-5964100,596... 41 0.001
06_03_0097 - 16607936-16608712,16610114-16610320,16611220-166113... 38 0.006
07_03_0602 + 19881998-19882217,19882303-19882496,19883719-198840... 32 0.41
08_02_0733 + 20546072-20546325,20546924-20547017,20547441-205476... 31 0.72
03_06_0353 - 33317015-33318235,33318567-33318824,33319587-333199... 31 0.72
02_01_0598 + 4440018-4440070,4440627-4440693,4440794-4440926,444... 31 0.72
01_01_0048 + 370911-371070,371324-371442 31 1.3
07_03_1026 - 23369298-23370326 30 2.2
05_05_0239 - 23543592-23544293,23544482-23544634,23544737-235449... 30 2.2
03_05_1140 + 30699054-30699533,30699627-30699708,30700265-30700428 30 2.2
01_07_0358 + 43039613-43039677,43039742-43039807,43039918-43040029 30 2.2
12_01_0101 - 779047-779298,779459-779711,779857-780005,780033-78... 29 3.8
02_01_0401 + 2927581-2927669,2927795-2927921,2928354-2928437,292... 29 3.8
10_08_0020 - 14196770-14197174,14198856-14198933 28 6.7
03_02_0930 - 12480983-12481888 28 6.7
06_03_0064 + 16134243-16134881 28 8.8
05_04_0059 - 17570271-17571190,17571394-17571469,17571645-17571671 28 8.8
>02_02_0240 + 8196140-8198248,8198381-8198650
Length = 792
Score = 138 bits (333), Expect = 6e-33
Identities = 76/183 (41%), Positives = 99/183 (54%), Gaps = 14/183 (7%)
Frame = +1
Query: 226 VRNIVDKTASFVARNGPEFEARIRQNELGNPKFNFLNSGDPYHAYYQHKVREIKEG---- 393
+R I++KTA+FV++NGPEFE RI + GN KFNFL DPYHAYYQH+V E+
Sbjct: 55 IRVIIEKTATFVSKNGPEFERRIISHNAGNAKFNFLQPSDPYHAYYQHRVSELAAAPPSA 114
Query: 394 ------KVPEP----TAPPTMPSGQQRMGLAPATAARQQELLKXXXXXXXXXXXXXXXDF 543
PEP APP P+ AA+ +
Sbjct: 115 AASAADAAPEPDESGAAPP--PADSAAAPTVDGEAAKADHSAPFRVPPPTKVLVPPKAEL 172
Query: 544 EFIADPPSISALELDIVKLTAQFVARNGRQFLTDLMKKEERNHQFDFLRPQHSLFQYFTR 723
+ P I+ ELDI+KLTAQFVARNG+ FLT L ++E N QF F+RP HS+F +FT+
Sbjct: 173 YTVHLPEGITGEELDIIKLTAQFVARNGKSFLTSLAQRESTNPQFHFIRPTHSMFTFFTK 232
Query: 724 LLE 732
L +
Sbjct: 233 LTD 235
Score = 33.9 bits (74), Expect = 0.13
Identities = 18/56 (32%), Positives = 29/56 (51%)
Frame = +1
Query: 550 IADPPSISALELDIVKLTAQFVARNGRQFLTDLMKKEERNHQFDFLRPQHSLFQYF 717
I PP I I++ TA FV++NG +F ++ N +F+FL+P Y+
Sbjct: 49 IHPPPDIRV----IIEKTATFVSKNGPEFERRIISHNAGNAKFNFLQPSDPYHAYY 100
>06_03_1156 - 28069663-28070393,28070966-28071231,28072023-28072909
Length = 627
Score = 50.0 bits (114), Expect = 2e-06
Identities = 25/70 (35%), Positives = 36/70 (51%)
Frame = +1
Query: 238 VDKTASFVARNGPEFEARIRQNELGNPKFNFLNSGDPYHAYYQHKVREIKEGKVPEPTAP 417
+DK ++A+NGPEFE IR + NP + F+ G+ HAYY++K+ P P
Sbjct: 112 IDKVVEYIAKNGPEFEVVIRDKQHDNPDYAFIFGGEG-HAYYRYKL-----WVSPRPPVA 165
Query: 418 PTMPSGQQRM 447
P P M
Sbjct: 166 PYPPGSMHMM 175
>01_06_0381 +
28878811-28879120,28880189-28880331,28880753-28881532,
28882568-28883968
Length = 877
Score = 47.2 bits (107), Expect = 1e-05
Identities = 19/57 (33%), Positives = 32/57 (56%)
Frame = +1
Query: 226 VRNIVDKTASFVARNGPEFEARIRQNELGNPKFNFLNSGDPYHAYYQHKVREIKEGK 396
++ ++K F+ RNG EFE ++ + + +F FL +PYH YY + E +E K
Sbjct: 357 LKRTMEKIVEFIIRNGKEFEGKLIEQDRTTGRFPFLLPSNPYHPYYLKLLEETQESK 413
Score = 39.5 bits (88), Expect = 0.003
Identities = 20/62 (32%), Positives = 37/62 (59%)
Frame = +1
Query: 550 IADPPSISALELDIVKLTAQFVARNGRQFLTDLMKKEERNHQFDFLRPQHSLFQYFTRLL 729
I +PPS L+ + K+ +F+ RNG++F L++++ +F FL P + Y+ +LL
Sbjct: 350 ILEPPSF--LKRTMEKIV-EFIIRNGKEFEGKLIEQDRTTGRFPFLLPSNPYHPYYLKLL 406
Query: 730 EQ 735
E+
Sbjct: 407 EE 408
Score = 37.1 bits (82), Expect = 0.014
Identities = 17/50 (34%), Positives = 28/50 (56%)
Frame = +1
Query: 226 VRNIVDKTASFVARNGPEFEARIRQNELGNPKFNFLNSGDPYHAYYQHKV 375
V I+ +TA FV+ +G + E +R + NP F FL H+Y+++ V
Sbjct: 157 VHQIIARTALFVSEHGGQSEIVLRVKQGSNPTFGFLMPDHHLHSYFRYLV 206
Score = 36.3 bits (80), Expect = 0.025
Identities = 22/58 (37%), Positives = 29/58 (50%)
Frame = +1
Query: 559 PPSISALELDIVKLTAQFVARNGRQFLTDLMKKEERNHQFDFLRPQHSLFQYFTRLLE 732
PPS + I+ TA FV+ +G Q L K+ N F FL P H L YF L++
Sbjct: 152 PPSEKVHQ--IIARTALFVSEHGGQSEIVLRVKQGSNPTFGFLMPDHHLHSYFRYLVD 207
>09_02_0221 +
5962606-5963197,5963711-5963837,5963994-5964100,
5964185-5964328,5964700-5964822,5964921-5965103,
5965540-5965718,5965797-5965823
Length = 493
Score = 40.7 bits (91), Expect = 0.001
Identities = 20/53 (37%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Frame = +1
Query: 226 VRNIVDKTASFVARNGPEFEARIRQNELGNPKFNFL-NSGDPYHAYYQHKVRE 381
V+ + DK A+FVA+NG +FE RQ G+ F FL + + YY+ ++ E
Sbjct: 207 VKQVADKLANFVAKNGRQFENVTRQRNPGDTPFKFLFDKNCSDYKYYEFRLAE 259
Score = 29.5 bits (63), Expect = 2.9
Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
Frame = +1
Query: 544 EFIADPPSISALELDIVKLTAQFVARNGRQFLTDLMKKEERNHQFDFLRPQH-SLFQYFT 720
E +A P + A FVA+NGRQF ++ + F FL ++ S ++Y+
Sbjct: 195 EIVAPSPPNDMTVKQVADKLANFVAKNGRQFENVTRQRNPGDTPFKFLFDKNCSDYKYYE 254
Query: 721 -RLLEQ 735
RL E+
Sbjct: 255 FRLAEE 260
>06_03_0097 -
16607936-16608712,16610114-16610320,16611220-16611336,
16611409-16611690,16611811-16612294,16612791-16612929,
16613138-16613243,16613396-16613562,16613632-16613707,
16614173-16614321,16614813-16614874,16615232-16615335,
16616856-16616950,16617046-16617136,16617785-16617922
Length = 997
Score = 38.3 bits (85), Expect = 0.006
Identities = 23/69 (33%), Positives = 37/69 (53%)
Frame = +1
Query: 226 VRNIVDKTASFVARNGPEFEARIRQNELGNPKFNFLNSGDPYHAYYQHKVREIKEGKVPE 405
+R +++ A+ VAR G E ++ N +FNFLN GD +YY K+ E ++ K +
Sbjct: 418 LRLLIEGCAAMVARCGKHIEDFYKEKSKTNTQFNFLNEGDGC-SYYARKLWEYQQ-KYID 475
Query: 406 PTAPPTMPS 432
P T+ S
Sbjct: 476 QQKPDTVQS 484
>07_03_0602 + 19881998-19882217,19882303-19882496,19883719-19884039,
19885016-19885244,19885554-19885653,19886413-19886539,
19886603-19886780,19886859-19886917,19887082-19887568,
19887682-19887836,19887930-19888100,19888181-19888270,
19888714-19888872,19888940-19889223,19889435-19889498
Length = 945
Score = 32.3 bits (70), Expect = 0.41
Identities = 21/58 (36%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Frame = +1
Query: 274 PEFEARIRQNELGNPKFNFLNSGDPYHAYYQH-KVREIKEGKVPEPTAPPTMPSGQQR 444
PE EAR + + +P N SG P A + K K GKVP T+ P G++R
Sbjct: 867 PEIEARFARKRVNSPSRN-KGSGKPSPAQQKSPKKHGHKNGKVPVKTSIKLTPDGKRR 923
>08_02_0733 +
20546072-20546325,20546924-20547017,20547441-20547624,
20547722-20547831,20548328-20548423,20548525-20548679,
20548743-20548986,20549159-20549314,20549600-20549829,
20552213-20552316,20552420-20552505,20552776-20553066,
20553383-20553475,20553640-20553735,20553838-20553939,
20554196-20554266,20554784-20555035,20555786-20556529,
20557038-20557119,20557192-20557347,20557446-20557655,
20558282-20558665
Length = 1397
Score = 31.5 bits (68), Expect = 0.72
Identities = 16/52 (30%), Positives = 28/52 (53%)
Frame = +3
Query: 456 SSHSGPPAGAPQGSCSCRTASAARPTTRFRIYR*STVYIGSGARHSEINRAI 611
S H+GP + + G TAS RP R ++Y+ ++ +G+ SE+ A+
Sbjct: 280 SVHAGPTSSSSNG-----TASVERPLQREKLYKGKDGFVAAGSTTSEVRGAV 326
>03_06_0353 -
33317015-33318235,33318567-33318824,33319587-33319904,
33319949-33320011,33320103-33320496,33320684-33320796,
33320932-33321639,33321667-33323199,33323395-33323607,
33323718-33324700,33324890-33325423,33325694-33325820,
33326083-33326162,33327347-33327377,33327949-33328053,
33328119-33328124,33328349-33328985,33329144-33329478,
33330394-33331113
Length = 2792
Score = 31.5 bits (68), Expect = 0.72
Identities = 18/40 (45%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = +1
Query: 355 AYYQHKVREIKE-GKVPEPTAPPTMPSGQQRMGLAPATAA 471
AY+Q+ ++ VP P AP PS Q R +APATAA
Sbjct: 94 AYHQNPTHNLQHRAAVPAPAAPAAAPSIQHRP-VAPATAA 132
>02_01_0598 +
4440018-4440070,4440627-4440693,4440794-4440926,
4441075-4441120,4442470-4442521,4442601-4442753,
4443338-4443457,4443549-4443714,4443822-4443934,
4444049-4444120,4444992-4445213,4445270-4445317,
4445639-4445697,4445809-4445887,4445982-4446119,
4446327-4446551,4446643-4447430,4447548-4447723,
4447911-4448169,4448646-4448707,4451055-4451212,
4451618-4451743,4452197-4452260,4452386-4452494,
4452607-4452760,4453055-4453178,4453257-4453333,
4453442-4453494,4453673-4453727,4453833-4454021
Length = 1379
Score = 31.5 bits (68), Expect = 0.72
Identities = 17/57 (29%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Frame = +1
Query: 226 VRNIVDKTASFVARNGPEFEARIRQNELGNPKFNFL-NSGDPYHAYYQHKVREIKEG 393
VR+++D A V G FE + + GN F+FL + H YY ++ +G
Sbjct: 344 VRHVIDTMALHVLDGGCAFEQAVMERGRGNSLFSFLFDLKSKEHTYYVWRLYSFAQG 400
>01_01_0048 + 370911-371070,371324-371442
Length = 92
Score = 30.7 bits (66), Expect = 1.3
Identities = 17/57 (29%), Positives = 28/57 (49%)
Frame = +3
Query: 474 PAGAPQGSCSCRTASAARPTTRFRIYR*STVYIGSGARHSEINRAICRQKRSSVLNG 644
PAGA +GS S S+ +P RF I + + V + + + N+A + +V G
Sbjct: 18 PAGAGEGSSSAAGPSSRKPNKRFEIKKWNAVALWAWGIECQANQASATSEECTVAWG 74
>07_03_1026 - 23369298-23370326
Length = 342
Score = 29.9 bits (64), Expect = 2.2
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = +1
Query: 400 PEPTAPPTMPSGQQRMGLAPATAARQQE 483
P P APP P + R+ + PA AAR +E
Sbjct: 4 PAPPAPPPRPPFKVRIRIKPARAARAEE 31
>05_05_0239 -
23543592-23544293,23544482-23544634,23544737-23544922,
23544951-23545097,23545274-23545411,23545527-23545727
Length = 508
Score = 29.9 bits (64), Expect = 2.2
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = +1
Query: 376 REIKEGKVPEPTAPPTMPSGQQRMGLAPATAARQQEL 486
R +KE V EP PPT S ++ AP T +Q++
Sbjct: 428 RSLKEADVDEPDTPPTRRSIKEDADDAPETPTTKQDI 464
>03_05_1140 + 30699054-30699533,30699627-30699708,30700265-30700428
Length = 241
Score = 29.9 bits (64), Expect = 2.2
Identities = 20/58 (34%), Positives = 29/58 (50%), Gaps = 7/58 (12%)
Frame = +1
Query: 550 IADPPSISALELDIVKLTAQFVARNGRQFLTDLMKKEERNHQFDFL-------RPQHS 702
+ADPP +S L+ V T F+A FL L + +R+ F+ L +PQHS
Sbjct: 154 VADPPYLSKECLEKVAKTVSFLAHPEGSFLLLLTGEVQRDRAFELLNVRPCGFKPQHS 211
>01_07_0358 + 43039613-43039677,43039742-43039807,43039918-43040029
Length = 80
Score = 29.9 bits (64), Expect = 2.2
Identities = 15/34 (44%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Frame = +3
Query: 414 TTNYAIRTATN-GSRSSHSGPPAGAPQGSCSCRT 512
TT + ATN GS ++ G GA GSC C T
Sbjct: 32 TTTTFLADATNKGSGAASGGSEMGAENGSCGCNT 65
>12_01_0101 -
779047-779298,779459-779711,779857-780005,780033-780281,
780377-780571,780681-780788,780935-781156,781669-781986,
781988-782615,783059-783135,783161-783267,783491-783619,
783763-783820,783902-783984,784458-784539,784617-784693,
784827-784910,784999-785068,785146-785234,785319-786008,
786485-786797
Length = 1410
Score = 29.1 bits (62), Expect = 3.8
Identities = 14/42 (33%), Positives = 19/42 (45%)
Frame = -3
Query: 694 GDEENQTDDYAPLSSLNPLRTDDRFWRQIARLISLCRAPEPI 569
GDE DD + LR +R +RQ+ R C PE +
Sbjct: 842 GDELEPDDDMTARERMEHLRRQEREYRQLVRRAKPCVLPEKL 883
>02_01_0401 +
2927581-2927669,2927795-2927921,2928354-2928437,
2928546-2928662,2928754-2928945,2929031-2929234,
2929322-2929809,2930429-2930528,2930686-2930745,
2931007-2931126,2931407-2931751
Length = 641
Score = 29.1 bits (62), Expect = 3.8
Identities = 12/23 (52%), Positives = 18/23 (78%)
Frame = +2
Query: 365 SIKSERSKREKFPNQLHHQLCHQ 433
S++S SK EK N+L++QLCH+
Sbjct: 149 SLESAVSKLEKDLNELYYQLCHE 171
>10_08_0020 - 14196770-14197174,14198856-14198933
Length = 160
Score = 28.3 bits (60), Expect = 6.7
Identities = 17/58 (29%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Frame = +3
Query: 435 TATNGSRSSHSGPPAGAPQGSCSCRTASAARPTTRFRIYR*S-TVYIGSGARHSEINR 605
TA GS S PP P +CS ++ +P + R R + ++G G + +NR
Sbjct: 7 TAAGGSSGGSSLPPTCLPPAACSWFGSNPVKPLNQPRPNRSAGYTWVGLGYSKTRLNR 64
>03_02_0930 - 12480983-12481888
Length = 301
Score = 28.3 bits (60), Expect = 6.7
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = +3
Query: 429 IRTATNGSRSSHSGPPAGAPQGSCSCRTASAARPTTRFR 545
+ ++ G S+++G P AP + S + SA RP+ R R
Sbjct: 179 VGSSGGGHDSNNAGTPVSAPAPASSSSSVSAGRPSRRPR 217
>06_03_0064 + 16134243-16134881
Length = 212
Score = 27.9 bits (59), Expect = 8.8
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = +1
Query: 391 GKVPEPTAPPTMPSGQQRMGLAPATAA 471
G P+P PP +P G R A A AA
Sbjct: 145 GSAPQPRPPPAVPLGVPRQYAAAAAAA 171
>05_04_0059 - 17570271-17571190,17571394-17571469,17571645-17571671
Length = 340
Score = 27.9 bits (59), Expect = 8.8
Identities = 15/59 (25%), Positives = 25/59 (42%)
Frame = +3
Query: 375 QRDQRGKSSRTNCTTNYAIRTATNGSRSSHSGPPAGAPQGSCSCRTASAARPTTRFRIY 551
Q+ + K+ T A +T G+ +SH P A Q + + ARP++ Y
Sbjct: 191 QQQKEEKAGEATMATAAAAAASTQGNHTSHHFPAAPLQQQPVHVMSYNVARPSSSAAYY 249
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,781,876
Number of Sequences: 37544
Number of extensions: 381753
Number of successful extensions: 1412
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1350
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1411
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1933531792
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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