Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte5a04
(735 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X85237-1|CAA59494.1| 793|Homo sapiens human splicing factor pro... 227 2e-59
CR456575-1|CAG30461.1| 793|Homo sapiens SF3A1 protein. 227 2e-59
BC007684-1|AAH07684.1| 793|Homo sapiens splicing factor 3a, sub... 227 2e-59
BC001976-1|AAH01976.1| 793|Homo sapiens splicing factor 3a, sub... 227 2e-59
AC004997-4|AAC23435.1| 793|Homo sapiens spliceosome associated ... 227 2e-59
Y08265-1|CAA69591.1| 469|Homo sapiens DAN26 protein. 61 5e-09
AF536542-1|AAN77183.1| 916|Homo sapiens SR-related CTD associat... 61 5e-09
BC111692-1|AAI11693.1| 620|Homo sapiens SR140 protein protein. 50 1e-05
BC006474-1|AAH06474.1| 1027|Homo sapiens Unknown (protein for IM... 50 1e-05
AB002330-1|BAA20790.1| 1028|Homo sapiens KIAA0332 protein. 50 1e-05
U08377-1|AAA19604.1| 951|Homo sapiens protein ( Human homolog o... 45 3e-04
BC024041-1|AAH24041.1| 547|Homo sapiens SFRS8 protein protein. 45 3e-04
BC015953-1|AAH15953.1| 760|Homo sapiens SFRS8 protein protein. 45 3e-04
BC008707-1|AAH08707.1| 760|Homo sapiens SFRS8 protein protein. 45 3e-04
AB208921-1|BAD92158.1| 636|Homo sapiens SFRS8 protein variant p... 45 3e-04
BC142988-1|AAI42989.1| 645|Homo sapiens splicing factor 4 protein. 43 0.001
BC063784-1|AAH63784.1| 643|Homo sapiens SF4 protein protein. 43 0.001
AY072917-1|AAL68961.1| 641|Homo sapiens RNA-binding protein spl... 43 0.001
AL713757-1|CAD28528.1| 392|Homo sapiens hypothetical protein pr... 43 0.001
AL137286-1|CAB70678.1| 392|Homo sapiens hypothetical protein pr... 43 0.001
AF521128-1|AAN77123.1| 645|Homo sapiens splicing factor 4 protein. 43 0.001
AC004475-1|AAC08052.1| 608|Homo sapiens F23858_1 protein. 43 0.001
BC032672-1|AAH32672.1| 273|Homo sapiens HVCN1 protein protein. 31 4.3
BC020586-1|AAH20586.1| 988|Homo sapiens SFRS14 protein protein. 31 4.3
BC009731-1|AAH09731.1| 273|Homo sapiens hydrogen voltage-gated ... 31 4.3
AY359054-1|AAQ89413.1| 255|Homo sapiens ATWD578 protein. 31 4.3
AF518874-1|AAN77117.1| 1082|Homo sapiens arginine/serine-rich 14... 31 4.3
AC004447-1|AAC06129.1| 949|Homo sapiens KIAA0365 protein. 31 4.3
AB002363-1|BAA20820.2| 1181|Homo sapiens KIAA0365 protein protein. 31 4.3
BC129926-1|AAI29927.1| 1008|Homo sapiens SFI1 protein protein. 31 5.7
BC110814-1|AAI10815.1| 1137|Homo sapiens SFI1 protein protein. 31 5.7
BC021576-1|AAH21576.1| 607|Homo sapiens SFI1 protein protein. 31 5.7
AL109802-2|CAH70755.1| 1211|Homo sapiens Sfi1 homolog, spindle a... 31 5.7
AL109802-1|CAM13202.1| 1160|Homo sapiens Sfi1 homolog, spindle a... 31 5.7
AL096768-9|CAI23034.1| 1211|Homo sapiens Sfi1 homolog, spindle a... 31 5.7
AL096768-8|CAM28334.1| 1160|Homo sapiens Sfi1 homolog, spindle a... 31 5.7
AL096701-9|CAI12881.1| 1211|Homo sapiens Sfi1 homolog, spindle a... 31 5.7
AL096701-8|CAM14700.1| 1160|Homo sapiens Sfi1 homolog, spindle a... 31 5.7
AB011114-1|BAA25468.2| 1212|Homo sapiens KIAA0542 protein protein. 31 5.7
>X85237-1|CAA59494.1| 793|Homo sapiens human splicing factor
protein.
Length = 793
Score = 227 bits (556), Expect = 2e-59
Identities = 113/172 (65%), Positives = 128/172 (74%), Gaps = 2/172 (1%)
Frame = +1
Query: 226 VRNIVDKTASFVARNGPEFEARIRQNELGNPKFNFLNSGDPYHAYYQHKVREIKEGKVPE 405
VRNIVDKTASFVARNGPEFEARIRQNE+ NPKFNFLN DPYHAYY+HKV E KEGK E
Sbjct: 49 VRNIVDKTASFVARNGPEFEARIRQNEINNPKFNFLNPNDPYHAYYRHKVSEFKEGKAQE 108
Query: 406 PTA--PPTMPSGQQRMGLAPATAARQQELLKXXXXXXXXXXXXXXXDFEFIADPPSISAL 579
P+A P M QQ T + + ++ +FEFIADPPSISA
Sbjct: 109 PSAAIPKVMQQQQQ------TTQQQLPQKVQAQVIQETIVPKEPPPEFEFIADPPSISAF 162
Query: 580 ELDIVKLTAQFVARNGRQFLTDLMKKEERNHQFDFLRPQHSLFQYFTRLLEQ 735
+LD+VKLTAQFVARNGRQFLT LM+KE+RN+QFDFLRPQHSLF YFT+L+EQ
Sbjct: 163 DLDVVKLTAQFVARNGRQFLTQLMQKEQRNYQFDFLRPQHSLFNYFTKLVEQ 214
>CR456575-1|CAG30461.1| 793|Homo sapiens SF3A1 protein.
Length = 793
Score = 227 bits (556), Expect = 2e-59
Identities = 113/172 (65%), Positives = 128/172 (74%), Gaps = 2/172 (1%)
Frame = +1
Query: 226 VRNIVDKTASFVARNGPEFEARIRQNELGNPKFNFLNSGDPYHAYYQHKVREIKEGKVPE 405
VRNIVDKTASFVARNGPEFEARIRQNE+ NPKFNFLN DPYHAYY+HKV E KEGK E
Sbjct: 49 VRNIVDKTASFVARNGPEFEARIRQNEINNPKFNFLNPNDPYHAYYRHKVSEFKEGKAQE 108
Query: 406 PTA--PPTMPSGQQRMGLAPATAARQQELLKXXXXXXXXXXXXXXXDFEFIADPPSISAL 579
P+A P M QQ T + + ++ +FEFIADPPSISA
Sbjct: 109 PSAAIPKVMQQQQQ------TTQQQLPQKVQAQVIQETIVPKEPPPEFEFIADPPSISAF 162
Query: 580 ELDIVKLTAQFVARNGRQFLTDLMKKEERNHQFDFLRPQHSLFQYFTRLLEQ 735
+LD+VKLTAQFVARNGRQFLT LM+KE+RN+QFDFLRPQHSLF YFT+L+EQ
Sbjct: 163 DLDVVKLTAQFVARNGRQFLTQLMQKEQRNYQFDFLRPQHSLFNYFTKLVEQ 214
>BC007684-1|AAH07684.1| 793|Homo sapiens splicing factor 3a,
subunit 1, 120kDa protein.
Length = 793
Score = 227 bits (556), Expect = 2e-59
Identities = 113/172 (65%), Positives = 128/172 (74%), Gaps = 2/172 (1%)
Frame = +1
Query: 226 VRNIVDKTASFVARNGPEFEARIRQNELGNPKFNFLNSGDPYHAYYQHKVREIKEGKVPE 405
VRNIVDKTASFVARNGPEFEARIRQNE+ NPKFNFLN DPYHAYY+HKV E KEGK E
Sbjct: 49 VRNIVDKTASFVARNGPEFEARIRQNEINNPKFNFLNPNDPYHAYYRHKVSEFKEGKAQE 108
Query: 406 PTA--PPTMPSGQQRMGLAPATAARQQELLKXXXXXXXXXXXXXXXDFEFIADPPSISAL 579
P+A P M QQ T + + ++ +FEFIADPPSISA
Sbjct: 109 PSAAIPKVMQQQQQ------TTQQQLPQKVQAQVIQETIVPKEPPPEFEFIADPPSISAF 162
Query: 580 ELDIVKLTAQFVARNGRQFLTDLMKKEERNHQFDFLRPQHSLFQYFTRLLEQ 735
+LD+VKLTAQFVARNGRQFLT LM+KE+RN+QFDFLRPQHSLF YFT+L+EQ
Sbjct: 163 DLDVVKLTAQFVARNGRQFLTQLMQKEQRNYQFDFLRPQHSLFNYFTKLVEQ 214
>BC001976-1|AAH01976.1| 793|Homo sapiens splicing factor 3a,
subunit 1, 120kDa protein.
Length = 793
Score = 227 bits (556), Expect = 2e-59
Identities = 113/172 (65%), Positives = 128/172 (74%), Gaps = 2/172 (1%)
Frame = +1
Query: 226 VRNIVDKTASFVARNGPEFEARIRQNELGNPKFNFLNSGDPYHAYYQHKVREIKEGKVPE 405
VRNIVDKTASFVARNGPEFEARIRQNE+ NPKFNFLN DPYHAYY+HKV E KEGK E
Sbjct: 49 VRNIVDKTASFVARNGPEFEARIRQNEINNPKFNFLNPNDPYHAYYRHKVSEFKEGKAQE 108
Query: 406 PTA--PPTMPSGQQRMGLAPATAARQQELLKXXXXXXXXXXXXXXXDFEFIADPPSISAL 579
P+A P M QQ T + + ++ +FEFIADPPSISA
Sbjct: 109 PSAAIPKVMQQQQQ------TTQQQLPQKVQAQVIQETIVPKEPPPEFEFIADPPSISAF 162
Query: 580 ELDIVKLTAQFVARNGRQFLTDLMKKEERNHQFDFLRPQHSLFQYFTRLLEQ 735
+LD+VKLTAQFVARNGRQFLT LM+KE+RN+QFDFLRPQHSLF YFT+L+EQ
Sbjct: 163 DLDVVKLTAQFVARNGRQFLTQLMQKEQRNYQFDFLRPQHSLFNYFTKLVEQ 214
>AC004997-4|AAC23435.1| 793|Homo sapiens spliceosome associated
protein 114 (SF3a) protein.
Length = 793
Score = 227 bits (556), Expect = 2e-59
Identities = 113/172 (65%), Positives = 128/172 (74%), Gaps = 2/172 (1%)
Frame = +1
Query: 226 VRNIVDKTASFVARNGPEFEARIRQNELGNPKFNFLNSGDPYHAYYQHKVREIKEGKVPE 405
VRNIVDKTASFVARNGPEFEARIRQNE+ NPKFNFLN DPYHAYY+HKV E KEGK E
Sbjct: 49 VRNIVDKTASFVARNGPEFEARIRQNEINNPKFNFLNPNDPYHAYYRHKVSEFKEGKAQE 108
Query: 406 PTA--PPTMPSGQQRMGLAPATAARQQELLKXXXXXXXXXXXXXXXDFEFIADPPSISAL 579
P+A P M QQ T + + ++ +FEFIADPPSISA
Sbjct: 109 PSAAIPKVMQQQQQ------TTQQQLPQKVQAQVIQETIVPKEPPPEFEFIADPPSISAF 162
Query: 580 ELDIVKLTAQFVARNGRQFLTDLMKKEERNHQFDFLRPQHSLFQYFTRLLEQ 735
+LD+VKLTAQFVARNGRQFLT LM+KE+RN+QFDFLRPQHSLF YFT+L+EQ
Sbjct: 163 DLDVVKLTAQFVARNGRQFLTQLMQKEQRNYQFDFLRPQHSLFNYFTKLVEQ 214
>Y08265-1|CAA69591.1| 469|Homo sapiens DAN26 protein.
Length = 469
Score = 60.9 bits (141), Expect = 5e-09
Identities = 36/84 (42%), Positives = 51/84 (60%), Gaps = 5/84 (5%)
Frame = +1
Query: 226 VRNIVDKTASFVARNGPEFEARIRQNELGNPKFNFLNSGDPYHAYYQHKV-----REIKE 390
+RN++DK A FVARNGPEFE + + NPKF+FL G+ +++YY+ K+ + I +
Sbjct: 22 LRNVIDKLAQFVARNGPEFEKMTMEKQKDNPKFSFLFGGE-FYSYYKCKLALEQQQLICK 80
Query: 391 GKVPEPTAPPTMPSGQQRMGLAPA 462
+ PE TMP Q LAPA
Sbjct: 81 QQTPELEPAATMPPLPQ-PPLAPA 103
Score = 35.5 bits (78), Expect = 0.20
Identities = 21/43 (48%), Positives = 26/43 (60%)
Frame = +1
Query: 559 PPSISALELDIVKLTAQFVARNGRQFLTDLMKKEERNHQFDFL 687
PP L I KL AQFVARNG +F M+K++ N +F FL
Sbjct: 16 PPDDQELRNVIDKL-AQFVARNGPEFEKMTMEKQKDNPKFSFL 57
>AF536542-1|AAN77183.1| 916|Homo sapiens SR-related CTD associated
factor 6 protein.
Length = 916
Score = 60.9 bits (141), Expect = 5e-09
Identities = 36/84 (42%), Positives = 51/84 (60%), Gaps = 5/84 (5%)
Frame = +1
Query: 226 VRNIVDKTASFVARNGPEFEARIRQNELGNPKFNFLNSGDPYHAYYQHKV-----REIKE 390
+RN++DK A FVARNGPEFE + + NPKF+FL G+ +++YY+ K+ + I +
Sbjct: 12 LRNVIDKLAQFVARNGPEFEKMTMEKQKDNPKFSFLFGGE-FYSYYKCKLALEQQQLICK 70
Query: 391 GKVPEPTAPPTMPSGQQRMGLAPA 462
+ PE TMP Q LAPA
Sbjct: 71 QQTPELEPAATMPPLPQ-PPLAPA 93
Score = 35.5 bits (78), Expect = 0.20
Identities = 21/43 (48%), Positives = 26/43 (60%)
Frame = +1
Query: 559 PPSISALELDIVKLTAQFVARNGRQFLTDLMKKEERNHQFDFL 687
PP L I KL AQFVARNG +F M+K++ N +F FL
Sbjct: 6 PPDDQELRNVIDKL-AQFVARNGPEFEKMTMEKQKDNPKFSFL 47
>BC111692-1|AAI11693.1| 620|Homo sapiens SR140 protein protein.
Length = 620
Score = 49.6 bits (113), Expect = 1e-05
Identities = 23/57 (40%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Frame = +1
Query: 235 IVDKTASFVARNGPEFEARIRQNELGNPKFNFL-NSGDPYHAYYQHKVREIKEGKVP 402
++ + FV R GP FEA I E+ NP F FL + P H YY+ K+ I +G P
Sbjct: 21 LIHRMIEFVVREGPMFEAMIMNREINNPMFRFLFENQTPAHVYYRWKLYSILQGDSP 77
>BC006474-1|AAH06474.1| 1027|Homo sapiens Unknown (protein for
IMAGE:2820942) protein.
Length = 1027
Score = 49.6 bits (113), Expect = 1e-05
Identities = 23/57 (40%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Frame = +1
Query: 235 IVDKTASFVARNGPEFEARIRQNELGNPKFNFL-NSGDPYHAYYQHKVREIKEGKVP 402
++ + FV R GP FEA I E+ NP F FL + P H YY+ K+ I +G P
Sbjct: 428 LIHRMIEFVVREGPMFEAMIMNREINNPMFRFLFENQTPAHVYYRWKLYSILQGDSP 484
>AB002330-1|BAA20790.1| 1028|Homo sapiens KIAA0332 protein.
Length = 1028
Score = 49.6 bits (113), Expect = 1e-05
Identities = 23/57 (40%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Frame = +1
Query: 235 IVDKTASFVARNGPEFEARIRQNELGNPKFNFL-NSGDPYHAYYQHKVREIKEGKVP 402
++ + FV R GP FEA I E+ NP F FL + P H YY+ K+ I +G P
Sbjct: 429 LIHRMIEFVVREGPMFEAMIMNREINNPMFRFLFENQTPAHVYYRWKLYSILQGDSP 485
>U08377-1|AAA19604.1| 951|Homo sapiens protein ( Human homolog of
Drosophila splicing regulator
suppressor-of-white-apricot mRNA, complete cds. ).
Length = 951
Score = 44.8 bits (101), Expect = 3e-04
Identities = 19/54 (35%), Positives = 33/54 (61%)
Frame = +1
Query: 235 IVDKTASFVARNGPEFEARIRQNELGNPKFNFLNSGDPYHAYYQHKVREIKEGK 396
I+++TASFV R G +FE ++ + N +F+FL + YY+ + +KEG+
Sbjct: 211 IIERTASFVCRQGAQFEIMLKAKQAPNSQFDFLRFDHYLNPYYKFIQKAMKEGR 264
Score = 42.7 bits (96), Expect = 0.001
Identities = 20/49 (40%), Positives = 30/49 (61%)
Frame = +1
Query: 226 VRNIVDKTASFVARNGPEFEARIRQNELGNPKFNFLNSGDPYHAYYQHK 372
V+ ++DK A +VARNG +FE +R + +F FL Y+AYY+ K
Sbjct: 456 VQPVIDKLAEYVARNGLKFETSVRAK--NDQRFEFLQPWYQYNAYYEFK 502
Score = 41.9 bits (94), Expect = 0.002
Identities = 21/43 (48%), Positives = 25/43 (58%)
Frame = +1
Query: 589 IVKLTAQFVARNGRQFLTDLMKKEERNHQFDFLRPQHSLFQYF 717
I++ TA FV R G QF L K+ N QFDFLR H L Y+
Sbjct: 211 IIERTASFVCRQGAQFEIMLKAKQAPNSQFDFLRFDHYLNPYY 253
>BC024041-1|AAH24041.1| 547|Homo sapiens SFRS8 protein protein.
Length = 547
Score = 44.8 bits (101), Expect = 3e-04
Identities = 19/54 (35%), Positives = 33/54 (61%)
Frame = +1
Query: 235 IVDKTASFVARNGPEFEARIRQNELGNPKFNFLNSGDPYHAYYQHKVREIKEGK 396
I+++TASFV R G +FE ++ + N +F+FL + YY+ + +KEG+
Sbjct: 148 IIERTASFVCRQGAQFEIMLKAKQARNSQFDFLRFDHYLNPYYKFIQKAMKEGR 201
Score = 44.8 bits (101), Expect = 3e-04
Identities = 22/43 (51%), Positives = 26/43 (60%)
Frame = +1
Query: 589 IVKLTAQFVARNGRQFLTDLMKKEERNHQFDFLRPQHSLFQYF 717
I++ TA FV R G QF L K+ RN QFDFLR H L Y+
Sbjct: 148 IIERTASFVCRQGAQFEIMLKAKQARNSQFDFLRFDHYLNPYY 190
Score = 43.6 bits (98), Expect = 8e-04
Identities = 20/49 (40%), Positives = 30/49 (61%)
Frame = +1
Query: 226 VRNIVDKTASFVARNGPEFEARIRQNELGNPKFNFLNSGDPYHAYYQHK 372
V+ ++DK A +VARNG +FE +R + +F FL Y+AYY+ K
Sbjct: 393 VQPVIDKLAEYVARNGLKFETSVRAK--NDQRFEFLQPWHQYNAYYEFK 439
Score = 34.7 bits (76), Expect = 0.35
Identities = 21/56 (37%), Positives = 33/56 (58%)
Frame = +1
Query: 550 IADPPSISALELDIVKLTAQFVARNGRQFLTDLMKKEERNHQFDFLRPQHSLFQYF 717
I PP + + I KL A++VARNG +F T + K ++ +F+FL+P H Y+
Sbjct: 387 IPPPPDVQPV---IDKL-AEYVARNGLKFETSVRAKNDQ--RFEFLQPWHQYNAYY 436
>BC015953-1|AAH15953.1| 760|Homo sapiens SFRS8 protein protein.
Length = 760
Score = 44.8 bits (101), Expect = 3e-04
Identities = 19/54 (35%), Positives = 33/54 (61%)
Frame = +1
Query: 235 IVDKTASFVARNGPEFEARIRQNELGNPKFNFLNSGDPYHAYYQHKVREIKEGK 396
I+++TASFV R G +FE ++ + N +F+FL + YY+ + +KEG+
Sbjct: 211 IIERTASFVCRQGAQFEIMLKAKQARNSQFDFLRFDHYLNPYYKFIQKAMKEGR 264
Score = 44.8 bits (101), Expect = 3e-04
Identities = 22/43 (51%), Positives = 26/43 (60%)
Frame = +1
Query: 589 IVKLTAQFVARNGRQFLTDLMKKEERNHQFDFLRPQHSLFQYF 717
I++ TA FV R G QF L K+ RN QFDFLR H L Y+
Sbjct: 211 IIERTASFVCRQGAQFEIMLKAKQARNSQFDFLRFDHYLNPYY 253
Score = 43.6 bits (98), Expect = 8e-04
Identities = 20/49 (40%), Positives = 30/49 (61%)
Frame = +1
Query: 226 VRNIVDKTASFVARNGPEFEARIRQNELGNPKFNFLNSGDPYHAYYQHK 372
V+ ++DK A +VARNG +FE +R + +F FL Y+AYY+ K
Sbjct: 456 VQPVIDKLAEYVARNGLKFETSVRAK--NDQRFEFLQPWHQYNAYYEFK 502
Score = 34.7 bits (76), Expect = 0.35
Identities = 21/56 (37%), Positives = 33/56 (58%)
Frame = +1
Query: 550 IADPPSISALELDIVKLTAQFVARNGRQFLTDLMKKEERNHQFDFLRPQHSLFQYF 717
I PP + + I KL A++VARNG +F T + K ++ +F+FL+P H Y+
Sbjct: 450 IPPPPDVQPV---IDKL-AEYVARNGLKFETSVRAKNDQ--RFEFLQPWHQYNAYY 499
>BC008707-1|AAH08707.1| 760|Homo sapiens SFRS8 protein protein.
Length = 760
Score = 44.8 bits (101), Expect = 3e-04
Identities = 19/54 (35%), Positives = 33/54 (61%)
Frame = +1
Query: 235 IVDKTASFVARNGPEFEARIRQNELGNPKFNFLNSGDPYHAYYQHKVREIKEGK 396
I+++TASFV R G +FE ++ + N +F+FL + YY+ + +KEG+
Sbjct: 211 IIERTASFVCRQGAQFEIMLKAKQARNSQFDFLRFDHYLNPYYKFIQKAMKEGR 264
Score = 44.8 bits (101), Expect = 3e-04
Identities = 22/43 (51%), Positives = 26/43 (60%)
Frame = +1
Query: 589 IVKLTAQFVARNGRQFLTDLMKKEERNHQFDFLRPQHSLFQYF 717
I++ TA FV R G QF L K+ RN QFDFLR H L Y+
Sbjct: 211 IIERTASFVCRQGAQFEIMLKAKQARNSQFDFLRFDHYLNPYY 253
Score = 43.6 bits (98), Expect = 8e-04
Identities = 20/49 (40%), Positives = 30/49 (61%)
Frame = +1
Query: 226 VRNIVDKTASFVARNGPEFEARIRQNELGNPKFNFLNSGDPYHAYYQHK 372
V+ ++DK A +VARNG +FE +R + +F FL Y+AYY+ K
Sbjct: 456 VQPVIDKLAEYVARNGLKFETSVRAK--NDQRFEFLQPWHQYNAYYEFK 502
Score = 34.7 bits (76), Expect = 0.35
Identities = 21/56 (37%), Positives = 33/56 (58%)
Frame = +1
Query: 550 IADPPSISALELDIVKLTAQFVARNGRQFLTDLMKKEERNHQFDFLRPQHSLFQYF 717
I PP + + I KL A++VARNG +F T + K ++ +F+FL+P H Y+
Sbjct: 450 IPPPPDVQPV---IDKL-AEYVARNGLKFETSVRAKNDQ--RFEFLQPWHQYNAYY 499
>AB208921-1|BAD92158.1| 636|Homo sapiens SFRS8 protein variant
protein.
Length = 636
Score = 44.8 bits (101), Expect = 3e-04
Identities = 19/54 (35%), Positives = 33/54 (61%)
Frame = +1
Query: 235 IVDKTASFVARNGPEFEARIRQNELGNPKFNFLNSGDPYHAYYQHKVREIKEGK 396
I+++TASFV R G +FE ++ + N +F+FL + YY+ + +KEG+
Sbjct: 95 IIERTASFVCRQGAQFEIMLKAKQARNSQFDFLRFDHYLNPYYKFIQKAMKEGR 148
Score = 44.8 bits (101), Expect = 3e-04
Identities = 22/43 (51%), Positives = 26/43 (60%)
Frame = +1
Query: 589 IVKLTAQFVARNGRQFLTDLMKKEERNHQFDFLRPQHSLFQYF 717
I++ TA FV R G QF L K+ RN QFDFLR H L Y+
Sbjct: 95 IIERTASFVCRQGAQFEIMLKAKQARNSQFDFLRFDHYLNPYY 137
Score = 43.6 bits (98), Expect = 8e-04
Identities = 20/49 (40%), Positives = 30/49 (61%)
Frame = +1
Query: 226 VRNIVDKTASFVARNGPEFEARIRQNELGNPKFNFLNSGDPYHAYYQHK 372
V+ ++DK A +VARNG +FE +R + +F FL Y+AYY+ K
Sbjct: 340 VQPVIDKLAEYVARNGLKFETSVRAK--NDQRFEFLQPWHQYNAYYEFK 386
Score = 34.7 bits (76), Expect = 0.35
Identities = 21/56 (37%), Positives = 33/56 (58%)
Frame = +1
Query: 550 IADPPSISALELDIVKLTAQFVARNGRQFLTDLMKKEERNHQFDFLRPQHSLFQYF 717
I PP + + I KL A++VARNG +F T + K ++ +F+FL+P H Y+
Sbjct: 334 IPPPPDVQPV---IDKL-AEYVARNGLKFETSVRAKNDQ--RFEFLQPWHQYNAYY 383
>BC142988-1|AAI42989.1| 645|Homo sapiens splicing factor 4 protein.
Length = 645
Score = 43.2 bits (97), Expect = 0.001
Identities = 21/58 (36%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Frame = +1
Query: 226 VRNIVDKTASFVARNGPEFEARIRQNELGNPKFNFL-NSGDPYHAYYQHKVREIKEGK 396
V+N+ +K A F+A GPE E QN N F+FL + YY+ K+ E ++ K
Sbjct: 263 VKNLAEKLARFIADGGPEVETIALQNNRENQAFSFLYEPNSQGYKYYRQKLEEFRKAK 320
Score = 41.9 bits (94), Expect = 0.002
Identities = 21/55 (38%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Frame = +1
Query: 229 RNIVDKTASFVARNGPEFEARIRQNELGNPKFNFLNSGDPYH-AYYQHKVREIKE 390
R +++K A FVA GPE E ++ NP F FL+ + YY+ KV EI++
Sbjct: 189 RKVIEKLARFVAEGGPELEKVAMEDYKDNPAFAFLHDKNSREFLYYRKKVAEIRK 243
>BC063784-1|AAH63784.1| 643|Homo sapiens SF4 protein protein.
Length = 643
Score = 43.2 bits (97), Expect = 0.001
Identities = 21/58 (36%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Frame = +1
Query: 226 VRNIVDKTASFVARNGPEFEARIRQNELGNPKFNFL-NSGDPYHAYYQHKVREIKEGK 396
V+N+ +K A F+A GPE E QN N F+FL + YY+ K+ E ++ K
Sbjct: 261 VKNLAEKLARFIADGGPEVETIALQNNRENQAFSFLYEPNSQGYKYYRQKLEEFRKAK 318
Score = 41.9 bits (94), Expect = 0.002
Identities = 21/55 (38%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Frame = +1
Query: 229 RNIVDKTASFVARNGPEFEARIRQNELGNPKFNFLNSGDPYH-AYYQHKVREIKE 390
R +++K A FVA GPE E ++ NP F FL+ + YY+ KV EI++
Sbjct: 187 RKVIEKLARFVAEGGPELEKVAMEDYKDNPAFAFLHDKNSREFLYYRKKVAEIRK 241
>AY072917-1|AAL68961.1| 641|Homo sapiens RNA-binding protein splice
variant a protein.
Length = 641
Score = 43.2 bits (97), Expect = 0.001
Identities = 21/58 (36%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Frame = +1
Query: 226 VRNIVDKTASFVARNGPEFEARIRQNELGNPKFNFL-NSGDPYHAYYQHKVREIKEGK 396
V+N+ +K A F+A GPE E QN N F+FL + YY+ K+ E ++ K
Sbjct: 259 VKNLAEKLARFIADGGPEVETIALQNNRENQAFSFLYEPNSQGYKYYRQKLEEFRKAK 316
Score = 41.9 bits (94), Expect = 0.002
Identities = 21/55 (38%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Frame = +1
Query: 229 RNIVDKTASFVARNGPEFEARIRQNELGNPKFNFLNSGDPYH-AYYQHKVREIKE 390
R +++K A FVA GPE E ++ NP F FL+ + YY+ KV EI++
Sbjct: 185 RKVIEKLARFVAEGGPELEKVAMEDYKDNPAFAFLHDKNSREFLYYRKKVAEIRK 239
>AL713757-1|CAD28528.1| 392|Homo sapiens hypothetical protein
protein.
Length = 392
Score = 43.2 bits (97), Expect = 0.001
Identities = 21/58 (36%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Frame = +1
Query: 226 VRNIVDKTASFVARNGPEFEARIRQNELGNPKFNFL-NSGDPYHAYYQHKVREIKEGK 396
V+N+ +K A F+A GPE E QN N F+FL + YY+ K+ E ++ K
Sbjct: 10 VKNLAEKLARFIADGGPEVETIALQNNRENQAFSFLYEPNSQGYKYYRQKLEEFRKAK 67
>AL137286-1|CAB70678.1| 392|Homo sapiens hypothetical protein
protein.
Length = 392
Score = 43.2 bits (97), Expect = 0.001
Identities = 21/58 (36%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Frame = +1
Query: 226 VRNIVDKTASFVARNGPEFEARIRQNELGNPKFNFL-NSGDPYHAYYQHKVREIKEGK 396
V+N+ +K A F+A GPE E QN N F+FL + YY+ K+ E ++ K
Sbjct: 10 VKNLAEKLARFIADGGPEVETIALQNNRENQAFSFLYEPNSQGYKYYRQKLEEFRKAK 67
>AF521128-1|AAN77123.1| 645|Homo sapiens splicing factor 4 protein.
Length = 645
Score = 43.2 bits (97), Expect = 0.001
Identities = 21/58 (36%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Frame = +1
Query: 226 VRNIVDKTASFVARNGPEFEARIRQNELGNPKFNFL-NSGDPYHAYYQHKVREIKEGK 396
V+N+ +K A F+A GPE E QN N F+FL + YY+ K+ E ++ K
Sbjct: 263 VKNLAEKLARFIADGGPEVETIALQNNRENQAFSFLYEPNSQGYKYYRQKLEEFRKAK 320
Score = 41.9 bits (94), Expect = 0.002
Identities = 21/55 (38%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Frame = +1
Query: 229 RNIVDKTASFVARNGPEFEARIRQNELGNPKFNFLNSGDPYH-AYYQHKVREIKE 390
R +++K A FVA GPE E ++ NP F FL+ + YY+ KV EI++
Sbjct: 189 RKVIEKLARFVAEGGPELEKVAMEDYKDNPAFAFLHDKNSREFLYYRKKVAEIRK 243
>AC004475-1|AAC08052.1| 608|Homo sapiens F23858_1 protein.
Length = 608
Score = 43.2 bits (97), Expect = 0.001
Identities = 21/58 (36%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Frame = +1
Query: 226 VRNIVDKTASFVARNGPEFEARIRQNELGNPKFNFL-NSGDPYHAYYQHKVREIKEGK 396
V+N+ +K A F+A GPE E QN N F+FL + YY+ K+ E ++ K
Sbjct: 226 VKNLAEKLARFIADGGPEVETIALQNNRENQAFSFLYEPNSQGYKYYRQKLEEFRKAK 283
Score = 41.9 bits (94), Expect = 0.002
Identities = 21/55 (38%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Frame = +1
Query: 229 RNIVDKTASFVARNGPEFEARIRQNELGNPKFNFLNSGDPYH-AYYQHKVREIKE 390
R +++K A FVA GPE E ++ NP F FL+ + YY+ KV EI++
Sbjct: 152 RKVIEKLARFVAEGGPELEKVAMEDYKDNPAFAFLHDKNSREFLYYRKKVAEIRK 206
>BC032672-1|AAH32672.1| 273|Homo sapiens HVCN1 protein protein.
Length = 273
Score = 31.1 bits (67), Expect = 4.3
Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Frame = +1
Query: 325 NFLNSGDPYHAY-YQHKVREIKEGKVPEPTAPPTMPSGQQRMGLAPATA 468
+F GD YHA+ +K E +E + E PPT SG++ AP A
Sbjct: 27 HFTVVGDDYHAWNINYKKWENEEEEEEEEQPPPTPVSGEEGRAAAPDVA 75
>BC020586-1|AAH20586.1| 988|Homo sapiens SFRS14 protein protein.
Length = 988
Score = 31.1 bits (67), Expect = 4.3
Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Frame = +1
Query: 241 DKTASFVARNGPEFEARIRQNELGNPKFNFL-NSGDPYHAYYQHKVREI 384
+K A FVA+ GPE E +N NP FL + +Y+ KV E+
Sbjct: 737 EKLARFVAQVGPEIEQFSIENSTDNPDLWFLHDQNSSAFKFYRKKVFEL 785
>BC009731-1|AAH09731.1| 273|Homo sapiens hydrogen voltage-gated
channel 1 protein.
Length = 273
Score = 31.1 bits (67), Expect = 4.3
Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Frame = +1
Query: 325 NFLNSGDPYHAY-YQHKVREIKEGKVPEPTAPPTMPSGQQRMGLAPATA 468
+F GD YHA+ +K E +E + E PPT SG++ AP A
Sbjct: 27 HFTVVGDDYHAWNINYKKWENEEEEEEEEQPPPTPVSGEEGRAAAPDVA 75
>AY359054-1|AAQ89413.1| 255|Homo sapiens ATWD578 protein.
Length = 255
Score = 31.1 bits (67), Expect = 4.3
Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Frame = +1
Query: 325 NFLNSGDPYHAY-YQHKVREIKEGKVPEPTAPPTMPSGQQRMGLAPATA 468
+F GD YHA+ +K E +E + E PPT SG++ AP A
Sbjct: 27 HFTVVGDDYHAWNINYKKWENEEEEEEEEQPPPTPVSGEEGRAAAPDVA 75
>AF518874-1|AAN77117.1| 1082|Homo sapiens arginine/serine-rich 14
splicing factor protein.
Length = 1082
Score = 31.1 bits (67), Expect = 4.3
Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Frame = +1
Query: 241 DKTASFVARNGPEFEARIRQNELGNPKFNFL-NSGDPYHAYYQHKVREI 384
+K A FVA+ GPE E +N NP FL + +Y+ KV E+
Sbjct: 789 EKLARFVAQVGPEIEQFSIENSTDNPDLWFLHDQNSSAFKFYRKKVFEL 837
>AC004447-1|AAC06129.1| 949|Homo sapiens KIAA0365 protein.
Length = 949
Score = 31.1 bits (67), Expect = 4.3
Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Frame = +1
Query: 241 DKTASFVARNGPEFEARIRQNELGNPKFNFL-NSGDPYHAYYQHKVREI 384
+K A FVA+ GPE E +N NP FL + +Y+ KV E+
Sbjct: 646 EKLARFVAQVGPEIEQFSIENSTDNPDLWFLHDQNSSAFKFYRKKVFEL 694
>AB002363-1|BAA20820.2| 1181|Homo sapiens KIAA0365 protein protein.
Length = 1181
Score = 31.1 bits (67), Expect = 4.3
Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Frame = +1
Query: 241 DKTASFVARNGPEFEARIRQNELGNPKFNFL-NSGDPYHAYYQHKVREI 384
+K A FVA+ GPE E +N NP FL + +Y+ KV E+
Sbjct: 888 EKLARFVAQVGPEIEQFSIENSTDNPDLWFLHDQNSSAFKFYRKKVFEL 936
>BC129926-1|AAI29927.1| 1008|Homo sapiens SFI1 protein protein.
Length = 1008
Score = 30.7 bits (66), Expect = 5.7
Identities = 20/66 (30%), Positives = 30/66 (45%), Gaps = 1/66 (1%)
Frame = +2
Query: 236 LLIKLPALWLVMVLNLKLGSDRMSWAIQS-STSLIQGIPTMLTISIKSERSKREKFPNQL 412
L K+ A WL VL + R+ WA+Q+ L+Q T L S ++ R++ Q
Sbjct: 676 LQAKVWATWLAFVLERRRKKARLQWALQAYQGQLLQEGATRLLRFAASMKASRQQLQAQQ 735
Query: 413 HHQLCH 430
Q H
Sbjct: 736 QVQAAH 741
>BC110814-1|AAI10815.1| 1137|Homo sapiens SFI1 protein protein.
Length = 1137
Score = 30.7 bits (66), Expect = 5.7
Identities = 20/66 (30%), Positives = 30/66 (45%), Gaps = 1/66 (1%)
Frame = +2
Query: 236 LLIKLPALWLVMVLNLKLGSDRMSWAIQS-STSLIQGIPTMLTISIKSERSKREKFPNQL 412
L K+ A WL VL + R+ WA+Q+ L+Q T L S ++ R++ Q
Sbjct: 747 LQAKVWATWLAFVLERRRKKARLQWALQAYQGQLLQEGATRLLRFAASMKASRQQLQAQQ 806
Query: 413 HHQLCH 430
Q H
Sbjct: 807 QVQAAH 812
>BC021576-1|AAH21576.1| 607|Homo sapiens SFI1 protein protein.
Length = 607
Score = 30.7 bits (66), Expect = 5.7
Identities = 20/66 (30%), Positives = 30/66 (45%), Gaps = 1/66 (1%)
Frame = +2
Query: 236 LLIKLPALWLVMVLNLKLGSDRMSWAIQS-STSLIQGIPTMLTISIKSERSKREKFPNQL 412
L K+ A WL VL + R+ WA+Q+ L+Q T L S ++ R++ Q
Sbjct: 217 LQAKVWATWLAFVLERRRKKARLQWALQAYQGQLLQEGATRLLRFAASMKASRQQLQAQQ 276
Query: 413 HHQLCH 430
Q H
Sbjct: 277 QVQAAH 282
>AL109802-2|CAH70755.1| 1211|Homo sapiens Sfi1 homolog, spindle
assembly associated (yeast) protein.
Length = 1211
Score = 30.7 bits (66), Expect = 5.7
Identities = 20/66 (30%), Positives = 30/66 (45%), Gaps = 1/66 (1%)
Frame = +2
Query: 236 LLIKLPALWLVMVLNLKLGSDRMSWAIQS-STSLIQGIPTMLTISIKSERSKREKFPNQL 412
L K+ A WL VL + R+ WA+Q+ L+Q T L S ++ R++ Q
Sbjct: 821 LQAKVWATWLAFVLERRRKKARLQWALQAYQGQLLQEGATRLLRFAASMKASRQQLQAQQ 880
Query: 413 HHQLCH 430
Q H
Sbjct: 881 QVQAAH 886
>AL109802-1|CAM13202.1| 1160|Homo sapiens Sfi1 homolog, spindle
assembly associated (yeast) protein.
Length = 1160
Score = 30.7 bits (66), Expect = 5.7
Identities = 20/66 (30%), Positives = 30/66 (45%), Gaps = 1/66 (1%)
Frame = +2
Query: 236 LLIKLPALWLVMVLNLKLGSDRMSWAIQS-STSLIQGIPTMLTISIKSERSKREKFPNQL 412
L K+ A WL VL + R+ WA+Q+ L+Q T L S ++ R++ Q
Sbjct: 770 LQAKVWATWLAFVLERRRKKARLQWALQAYQGQLLQEGATRLLRFAASMKASRQQLQAQQ 829
Query: 413 HHQLCH 430
Q H
Sbjct: 830 QVQAAH 835
>AL096768-9|CAI23034.1| 1211|Homo sapiens Sfi1 homolog, spindle
assembly associated (yeast) protein.
Length = 1211
Score = 30.7 bits (66), Expect = 5.7
Identities = 20/66 (30%), Positives = 30/66 (45%), Gaps = 1/66 (1%)
Frame = +2
Query: 236 LLIKLPALWLVMVLNLKLGSDRMSWAIQS-STSLIQGIPTMLTISIKSERSKREKFPNQL 412
L K+ A WL VL + R+ WA+Q+ L+Q T L S ++ R++ Q
Sbjct: 821 LQAKVWATWLAFVLERRRKKARLQWALQAYQGQLLQEGATRLLRFAASMKASRQQLQAQQ 880
Query: 413 HHQLCH 430
Q H
Sbjct: 881 QVQAAH 886
>AL096768-8|CAM28334.1| 1160|Homo sapiens Sfi1 homolog, spindle
assembly associated (yeast) protein.
Length = 1160
Score = 30.7 bits (66), Expect = 5.7
Identities = 20/66 (30%), Positives = 30/66 (45%), Gaps = 1/66 (1%)
Frame = +2
Query: 236 LLIKLPALWLVMVLNLKLGSDRMSWAIQS-STSLIQGIPTMLTISIKSERSKREKFPNQL 412
L K+ A WL VL + R+ WA+Q+ L+Q T L S ++ R++ Q
Sbjct: 770 LQAKVWATWLAFVLERRRKKARLQWALQAYQGQLLQEGATRLLRFAASMKASRQQLQAQQ 829
Query: 413 HHQLCH 430
Q H
Sbjct: 830 QVQAAH 835
>AL096701-9|CAI12881.1| 1211|Homo sapiens Sfi1 homolog, spindle
assembly associated (yeast) protein.
Length = 1211
Score = 30.7 bits (66), Expect = 5.7
Identities = 20/66 (30%), Positives = 30/66 (45%), Gaps = 1/66 (1%)
Frame = +2
Query: 236 LLIKLPALWLVMVLNLKLGSDRMSWAIQS-STSLIQGIPTMLTISIKSERSKREKFPNQL 412
L K+ A WL VL + R+ WA+Q+ L+Q T L S ++ R++ Q
Sbjct: 821 LQAKVWATWLAFVLERRRKKARLQWALQAYQGQLLQEGATRLLRFAASMKASRQQLQAQQ 880
Query: 413 HHQLCH 430
Q H
Sbjct: 881 QVQAAH 886
>AL096701-8|CAM14700.1| 1160|Homo sapiens Sfi1 homolog, spindle
assembly associated (yeast) protein.
Length = 1160
Score = 30.7 bits (66), Expect = 5.7
Identities = 20/66 (30%), Positives = 30/66 (45%), Gaps = 1/66 (1%)
Frame = +2
Query: 236 LLIKLPALWLVMVLNLKLGSDRMSWAIQS-STSLIQGIPTMLTISIKSERSKREKFPNQL 412
L K+ A WL VL + R+ WA+Q+ L+Q T L S ++ R++ Q
Sbjct: 770 LQAKVWATWLAFVLERRRKKARLQWALQAYQGQLLQEGATRLLRFAASMKASRQQLQAQQ 829
Query: 413 HHQLCH 430
Q H
Sbjct: 830 QVQAAH 835
>AB011114-1|BAA25468.2| 1212|Homo sapiens KIAA0542 protein protein.
Length = 1212
Score = 30.7 bits (66), Expect = 5.7
Identities = 20/66 (30%), Positives = 30/66 (45%), Gaps = 1/66 (1%)
Frame = +2
Query: 236 LLIKLPALWLVMVLNLKLGSDRMSWAIQS-STSLIQGIPTMLTISIKSERSKREKFPNQL 412
L K+ A WL VL + R+ WA+Q+ L+Q T L S ++ R++ Q
Sbjct: 822 LQAKVWATWLAFVLERRRKKARLQWALQAYQGQLLQEGATRLLRFAASMKASRQQLQAQQ 881
Query: 413 HHQLCH 430
Q H
Sbjct: 882 QVQAAH 887
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,627,359
Number of Sequences: 237096
Number of extensions: 2013182
Number of successful extensions: 6274
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 5753
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6250
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8735159784
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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