Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte5a03
         (762 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT023341-1|AAY55757.1|  109|Drosophila melanogaster IP02167p pro...    32   0.74 

>BT023341-1|AAY55757.1|  109|Drosophila melanogaster IP02167p
           protein.
          Length = 109

 Score = 32.3 bits (70), Expect = 0.74
 Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
 Frame = +3

Query: 411 WALRSL*RPMWTVRTVFWTMRALHA-EMFPVLWTMPVVLQAILWALWTLSVSMRTV 575
           W L++  R    + T++  +R L    +   LWT    ++ +LW LWTL   +RT+
Sbjct: 18  WLLKTTSRINHVLWTLWIVLRILLLWSLLWTLWTPMWAVRILLWTLWTLWTLLRTI 73



 Score = 31.1 bits (67), Expect = 1.7
 Identities = 24/68 (35%), Positives = 34/68 (50%), Gaps = 5/68 (7%)
 Frame = +3

Query: 399 LWPMW-ALRSL*--RPMWTVRTVFWTMRALHAEMFPVLWTMPVVLQAILWAL--WTLSVS 563
           LW +W  LR L     +WT+ T  W +R L       LWT+  +L+ I W L  W L ++
Sbjct: 30  LWTLWIVLRILLLWSLLWTLWTPMWAVRIL----LWTLWTLWTLLRTI-WQLLRWLLVLN 84

Query: 564 MRTVRPLR 587
            R  +P R
Sbjct: 85  ARNWQPNR 92



 Score = 30.3 bits (65), Expect = 3.0
 Identities = 24/83 (28%), Positives = 43/83 (51%)
 Frame = +3

Query: 459 FWTMRALHAEMFPVLWTMPVVLQAILWALWTLSVSMRTVRPLRPMSFIWFVPVLWANAAL 638
           FW ++   + +  VLWT+ +VL+ +L  LW+L  ++ T     PM   W V +L      
Sbjct: 17  FWLLKTT-SRINHVLWTLWIVLRILL--LWSLLWTLWT-----PM---WAVRIL------ 59

Query: 639 WPEPSVWAVYPLWSVLLTRWNMV 707
                +W ++ LW++L T W ++
Sbjct: 60  -----LWTLWTLWTLLRTIWQLL 77


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,351,656
Number of Sequences: 53049
Number of extensions: 408378
Number of successful extensions: 1210
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 1162
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1203
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3499501170
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)