Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte4p22
(727 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC126139-1|AAI26140.1| 215|Homo sapiens lens intrinsic membrane... 38 0.048
BC074917-1|AAH74917.1| 215|Homo sapiens lens intrinsic membrane... 38 0.048
BC074916-1|AAH74916.1| 215|Homo sapiens lens intrinsic membrane... 38 0.048
BC069430-1|AAH69430.1| 215|Homo sapiens lens intrinsic membrane... 38 0.048
AF340020-1|AAK26328.1| 173|Homo sapiens MP19 protein. 38 0.048
AF340019-1|AAK26327.1| 215|Homo sapiens MP19ins protein. 38 0.048
AF305941-1|AAG32328.1| 173|Homo sapiens LIM2 protein. 38 0.048
BC008303-1|AAH08303.1| 235|Homo sapiens transmembrane protein 1... 31 5.6
AF258340-1|AAF68667.1| 235|Homo sapiens hepatocellular carcinom... 31 5.6
AC006479-1|AAP21884.1| 235|Homo sapiens unknown protein. 31 5.6
>BC126139-1|AAI26140.1| 215|Homo sapiens lens intrinsic membrane
protein 2, 19kDa protein.
Length = 215
Score = 37.5 bits (83), Expect = 0.048
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = +1
Query: 184 GASITYVGALFLLLSFAGPYWMESYPEMFSPFKHMGLWEYCFDN 315
G +VG + L+++ A +WM+ + F H GLW YC N
Sbjct: 8 GLFCAWVGTILLVVAMATDHWMQY--RLSGSFAHQGLWRYCLGN 49
>BC074917-1|AAH74917.1| 215|Homo sapiens lens intrinsic membrane
protein 2, 19kDa protein.
Length = 215
Score = 37.5 bits (83), Expect = 0.048
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = +1
Query: 184 GASITYVGALFLLLSFAGPYWMESYPEMFSPFKHMGLWEYCFDN 315
G +VG + L+++ A +WM+ + F H GLW YC N
Sbjct: 8 GLFCAWVGTILLVVAMATDHWMQY--RLSGSFAHQGLWRYCLGN 49
>BC074916-1|AAH74916.1| 215|Homo sapiens lens intrinsic membrane
protein 2, 19kDa protein.
Length = 215
Score = 37.5 bits (83), Expect = 0.048
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = +1
Query: 184 GASITYVGALFLLLSFAGPYWMESYPEMFSPFKHMGLWEYCFDN 315
G +VG + L+++ A +WM+ + F H GLW YC N
Sbjct: 8 GLFCAWVGTILLVVAMATDHWMQY--RLSGSFAHQGLWRYCLGN 49
>BC069430-1|AAH69430.1| 215|Homo sapiens lens intrinsic membrane
protein 2, 19kDa protein.
Length = 215
Score = 37.5 bits (83), Expect = 0.048
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = +1
Query: 184 GASITYVGALFLLLSFAGPYWMESYPEMFSPFKHMGLWEYCFDN 315
G +VG + L+++ A +WM+ + F H GLW YC N
Sbjct: 8 GLFCAWVGTILLVVAMATDHWMQY--RLSGSFAHQGLWRYCLGN 49
>AF340020-1|AAK26328.1| 173|Homo sapiens MP19 protein.
Length = 173
Score = 37.5 bits (83), Expect = 0.048
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = +1
Query: 184 GASITYVGALFLLLSFAGPYWMESYPEMFSPFKHMGLWEYCFDN 315
G +VG + L+++ A +WM+ + F H GLW YC N
Sbjct: 8 GLFCAWVGTILLVVAMATDHWMQY--RLSGSFAHQGLWRYCLGN 49
>AF340019-1|AAK26327.1| 215|Homo sapiens MP19ins protein.
Length = 215
Score = 37.5 bits (83), Expect = 0.048
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = +1
Query: 184 GASITYVGALFLLLSFAGPYWMESYPEMFSPFKHMGLWEYCFDN 315
G +VG + L+++ A +WM+ + F H GLW YC N
Sbjct: 8 GLFCAWVGTILLVVAMATDHWMQY--RLSGSFAHQGLWRYCLGN 49
>AF305941-1|AAG32328.1| 173|Homo sapiens LIM2 protein.
Length = 173
Score = 37.5 bits (83), Expect = 0.048
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = +1
Query: 184 GASITYVGALFLLLSFAGPYWMESYPEMFSPFKHMGLWEYCFDN 315
G +VG + L+++ A +WM+ + F H GLW YC N
Sbjct: 8 GLFCAWVGTILLVVAMATDHWMQY--RLSGSFAHQGLWRYCLGN 49
>BC008303-1|AAH08303.1| 235|Homo sapiens transmembrane protein 176A
protein.
Length = 235
Score = 30.7 bits (66), Expect = 5.6
Identities = 24/77 (31%), Positives = 35/77 (45%)
Frame = +1
Query: 460 SFAAQVLLACVIVRWPLKTVLRYEWIFVFYSFIMVAVSSAFLFLAVAIFGGNCYRRDWLL 639
S A++LL C P T R + S++M V L + A+ GG Y RD+ L
Sbjct: 27 SALAKLLLTCCSALRPRATQARGSSRLLVASWVMQIV----LGILSAVLGGFFYIRDYTL 82
Query: 640 YPSFNVLSWSYAFAVIA 690
+ W+ A AV+A
Sbjct: 83 LVTSGAAIWTGAVAVLA 99
>AF258340-1|AAF68667.1| 235|Homo sapiens hepatocellular
carcinoma-associated antigen 112 protein.
Length = 235
Score = 30.7 bits (66), Expect = 5.6
Identities = 24/77 (31%), Positives = 35/77 (45%)
Frame = +1
Query: 460 SFAAQVLLACVIVRWPLKTVLRYEWIFVFYSFIMVAVSSAFLFLAVAIFGGNCYRRDWLL 639
S A++LL C P T R + S++M V L + A+ GG Y RD+ L
Sbjct: 27 SALAKLLLTCCSALRPRATQARGSSRLLVASWVMQIV----LGILSAVLGGFFYIRDYTL 82
Query: 640 YPSFNVLSWSYAFAVIA 690
+ W+ A AV+A
Sbjct: 83 LVTSGAAIWTGAVAVLA 99
>AC006479-1|AAP21884.1| 235|Homo sapiens unknown protein.
Length = 235
Score = 30.7 bits (66), Expect = 5.6
Identities = 24/77 (31%), Positives = 35/77 (45%)
Frame = +1
Query: 460 SFAAQVLLACVIVRWPLKTVLRYEWIFVFYSFIMVAVSSAFLFLAVAIFGGNCYRRDWLL 639
S A++LL C P T R + S++M V L + A+ GG Y RD+ L
Sbjct: 27 SALAKLLLTCCSALRPRATQARGSSRLLVASWVMQIV----LGILSAVLGGFFYIRDYTL 82
Query: 640 YPSFNVLSWSYAFAVIA 690
+ W+ A AV+A
Sbjct: 83 LVTSGAAIWTGAVAVLA 99
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 116,497,879
Number of Sequences: 237096
Number of extensions: 2793265
Number of successful extensions: 12412
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 12131
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12405
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8567175942
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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