Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte4p22
(727 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81457-5|CAB03817.2| 584|Caenorhabditis elegans Hypothetical pr... 32 0.36
Z74031-10|CAA98450.1| 399|Caenorhabditis elegans Hypothetical p... 32 0.36
AL034488-13|CAA22460.2| 345|Caenorhabditis elegans Hypothetical... 31 0.84
Z68008-2|CAD44147.1| 142|Caenorhabditis elegans Hypothetical pr... 30 1.5
U23529-9|AAL32210.1| 713|Caenorhabditis elegans G-protein-linke... 30 1.9
U23529-8|AAL32209.1| 682|Caenorhabditis elegans G-protein-linke... 30 1.9
U23529-7|AAL32211.1| 622|Caenorhabditis elegans G-protein-linke... 30 1.9
AF117301-1|AAF26202.1| 622|Caenorhabditis elegans G protein-lin... 30 1.9
AF117300-1|AAF26201.1| 713|Caenorhabditis elegans G protein-lin... 30 1.9
AF075245-1|AAD13747.1| 682|Caenorhabditis elegans G protein-lin... 30 1.9
U29154-2|AAA68418.2| 220|Caenorhabditis elegans Hypothetical pr... 29 3.4
AC006790-13|AAF60737.2| 351|Caenorhabditis elegans Serpentine r... 29 3.4
U80027-1|AAC48122.2| 338|Caenorhabditis elegans Serpentine rece... 29 4.5
Z83109-1|CAB05513.1| 339|Caenorhabditis elegans Hypothetical pr... 28 5.9
Z82278-8|CAB05251.2| 312|Caenorhabditis elegans Hypothetical pr... 28 5.9
Z81544-5|CAB04430.2| 323|Caenorhabditis elegans Hypothetical pr... 28 7.8
Z69361-2|CAA93288.1| 2165|Caenorhabditis elegans Hypothetical pr... 28 7.8
Z69360-10|CAA93287.1| 2165|Caenorhabditis elegans Hypothetical p... 28 7.8
Z49126-5|CAA88940.3| 1270|Caenorhabditis elegans Hypothetical pr... 28 7.8
>Z81457-5|CAB03817.2| 584|Caenorhabditis elegans Hypothetical
protein C01G12.7 protein.
Length = 584
Score = 32.3 bits (70), Expect = 0.36
Identities = 24/97 (24%), Positives = 46/97 (47%), Gaps = 2/97 (2%)
Frame = +1
Query: 418 LMAVQFFVTVALMLSFAAQVLLACVI--VRWPLKTVLRYEWIFVFYSFIMVAVSSAFLFL 591
L V F + L+++FA+ +LLA VI RW +K L + + + ++++++ L
Sbjct: 112 LSVVLGFYALLLLIAFASNILLAGVIKKYRWGMKMALLFH---LCVTGALLSITNTLHLL 168
Query: 592 AVAIFGGNCYRRDWLLYPSFNVLSWSYAFAVIAFILF 702
A R + SF +++W F A ++F
Sbjct: 169 ASGYHLLKRQRNSSTVLQSFAIIAWVDHFIGFALLIF 205
>Z74031-10|CAA98450.1| 399|Caenorhabditis elegans Hypothetical
protein F32D8.10 protein.
Length = 399
Score = 32.3 bits (70), Expect = 0.36
Identities = 17/69 (24%), Positives = 33/69 (47%)
Frame = +2
Query: 233 LVLTGWNHIQKCSLHSNIWDCGSIALIISGSLVTGLTKNLMGVTISTAKNIMQSSIGCCL 412
+++T W +I K S+ S W + + SL+T + + + + +++ +G CL
Sbjct: 294 VIITIWEYIDKESIFSEDWIAFYVLSVDVISLLTIVASSARLPIYAYFQPLLRKEMGQCL 353
Query: 413 DG*WLCSFS 439
W C FS
Sbjct: 354 GDWWCCCFS 362
>AL034488-13|CAA22460.2| 345|Caenorhabditis elegans Hypothetical
protein Y54G11A.12 protein.
Length = 345
Score = 31.1 bits (67), Expect = 0.84
Identities = 8/17 (47%), Positives = 14/17 (82%)
Frame = +3
Query: 654 CFVLVLCICGYCLYIIW 704
CF+L + +C YCL+++W
Sbjct: 209 CFILSVLVCFYCLHVLW 225
>Z68008-2|CAD44147.1| 142|Caenorhabditis elegans Hypothetical
protein R08B4.4 protein.
Length = 142
Score = 30.3 bits (65), Expect = 1.5
Identities = 24/80 (30%), Positives = 38/80 (47%)
Frame = +1
Query: 370 YSQEYYAIKHWLLPGWLMAVQFFVTVALMLSFAAQVLLACVIVRWPLKTVLRYEWIFVFY 549
Y + A K PGWL+A F + L+FA +L + + + +LR + + Y
Sbjct: 11 YFEANDACKLQFAPGWLVATSIF----MYLNFACVLLTFFICIIGLIIFMLRGDSKYQKY 66
Query: 550 SFIMVAVSSAFLFLAVAIFG 609
F+++ SS L AIFG
Sbjct: 67 MFVLICGSS----LLTAIFG 82
>U23529-9|AAL32210.1| 713|Caenorhabditis elegans G-protein-linked
acetylcholinereceptor protein 1, isoform b protein.
Length = 713
Score = 29.9 bits (64), Expect = 1.9
Identities = 18/75 (24%), Positives = 34/75 (45%), Gaps = 6/75 (8%)
Frame = +1
Query: 499 RWPLKTVLRYEWIFVFYSFIMVAVSSAFLFLAVAIFGGNCYRRDWLLYPS------FNVL 660
RWPL V W+F+ Y+ +V++ + L A + C+ +L + S V+
Sbjct: 91 RWPLGWVACQTWLFLDYTLCLVSILTVLLITADR-YLSVCHTAKYLKWQSPTKTQLLIVM 149
Query: 661 SWSYAFAVIAFILFG 705
SW + +++G
Sbjct: 150 SWLLPAIIFGIMIYG 164
>U23529-8|AAL32209.1| 682|Caenorhabditis elegans G-protein-linked
acetylcholinereceptor protein 1, isoform a protein.
Length = 682
Score = 29.9 bits (64), Expect = 1.9
Identities = 18/75 (24%), Positives = 34/75 (45%), Gaps = 6/75 (8%)
Frame = +1
Query: 499 RWPLKTVLRYEWIFVFYSFIMVAVSSAFLFLAVAIFGGNCYRRDWLLYPS------FNVL 660
RWPL V W+F+ Y+ +V++ + L A + C+ +L + S V+
Sbjct: 91 RWPLGWVACQTWLFLDYTLCLVSILTVLLITADR-YLSVCHTAKYLKWQSPTKTQLLIVM 149
Query: 661 SWSYAFAVIAFILFG 705
SW + +++G
Sbjct: 150 SWLLPAIIFGIMIYG 164
>U23529-7|AAL32211.1| 622|Caenorhabditis elegans G-protein-linked
acetylcholinereceptor protein 1, isoform c protein.
Length = 622
Score = 29.9 bits (64), Expect = 1.9
Identities = 18/75 (24%), Positives = 34/75 (45%), Gaps = 6/75 (8%)
Frame = +1
Query: 499 RWPLKTVLRYEWIFVFYSFIMVAVSSAFLFLAVAIFGGNCYRRDWLLYPS------FNVL 660
RWPL V W+F+ Y+ +V++ + L A + C+ +L + S V+
Sbjct: 91 RWPLGWVACQTWLFLDYTLCLVSILTVLLITADR-YLSVCHTAKYLKWQSPTKTQLLIVM 149
Query: 661 SWSYAFAVIAFILFG 705
SW + +++G
Sbjct: 150 SWLLPAIIFGIMIYG 164
>AF117301-1|AAF26202.1| 622|Caenorhabditis elegans G protein-linked
acetylcholinereceptor GAR-1c protein.
Length = 622
Score = 29.9 bits (64), Expect = 1.9
Identities = 18/75 (24%), Positives = 34/75 (45%), Gaps = 6/75 (8%)
Frame = +1
Query: 499 RWPLKTVLRYEWIFVFYSFIMVAVSSAFLFLAVAIFGGNCYRRDWLLYPS------FNVL 660
RWPL V W+F+ Y+ +V++ + L A + C+ +L + S V+
Sbjct: 91 RWPLGWVACQTWLFLDYTLCLVSILTVLLITADR-YLSVCHTAKYLKWQSPTKTQLLIVM 149
Query: 661 SWSYAFAVIAFILFG 705
SW + +++G
Sbjct: 150 SWLLPAIIFGIMIYG 164
>AF117300-1|AAF26201.1| 713|Caenorhabditis elegans G protein-linked
acetylcholinereceptor GAR-1a protein.
Length = 713
Score = 29.9 bits (64), Expect = 1.9
Identities = 18/75 (24%), Positives = 34/75 (45%), Gaps = 6/75 (8%)
Frame = +1
Query: 499 RWPLKTVLRYEWIFVFYSFIMVAVSSAFLFLAVAIFGGNCYRRDWLLYPS------FNVL 660
RWPL V W+F+ Y+ +V++ + L A + C+ +L + S V+
Sbjct: 91 RWPLGWVACQTWLFLDYTLCLVSILTVLLITADR-YLSVCHTAKYLKWQSPTKTQLLIVM 149
Query: 661 SWSYAFAVIAFILFG 705
SW + +++G
Sbjct: 150 SWLLPAIIFGIMIYG 164
>AF075245-1|AAD13747.1| 682|Caenorhabditis elegans G protein-linked
acetylcholinereceptor GAR-1b protein.
Length = 682
Score = 29.9 bits (64), Expect = 1.9
Identities = 18/75 (24%), Positives = 34/75 (45%), Gaps = 6/75 (8%)
Frame = +1
Query: 499 RWPLKTVLRYEWIFVFYSFIMVAVSSAFLFLAVAIFGGNCYRRDWLLYPS------FNVL 660
RWPL V W+F+ Y+ +V++ + L A + C+ +L + S V+
Sbjct: 91 RWPLGWVACQTWLFLDYTLCLVSILTVLLITADR-YLSVCHTAKYLKWQSPTKTQLLIVM 149
Query: 661 SWSYAFAVIAFILFG 705
SW + +++G
Sbjct: 150 SWLLPAIIFGIMIYG 164
>U29154-2|AAA68418.2| 220|Caenorhabditis elegans Hypothetical
protein T07F12.2 protein.
Length = 220
Score = 29.1 bits (62), Expect = 3.4
Identities = 20/63 (31%), Positives = 30/63 (47%)
Frame = +1
Query: 487 CVIVRWPLKTVLRYEWIFVFYSFIMVAVSSAFLFLAVAIFGGNCYRRDWLLYPSFNVLSW 666
CV V +P+ TV + V Y AV +A+ A + F G R WLL+ ++
Sbjct: 48 CVPVHFPV-TVFAHSAFLVLY-----AVFTAWFLPADSTFSGKMKPRGWLLFSFLLIIQV 101
Query: 667 SYA 675
+YA
Sbjct: 102 AYA 104
>AC006790-13|AAF60737.2| 351|Caenorhabditis elegans Serpentine
receptor, class z protein5 protein.
Length = 351
Score = 29.1 bits (62), Expect = 3.4
Identities = 17/68 (25%), Positives = 31/68 (45%)
Frame = +1
Query: 274 PFKHMGLWEYCFDNFRFPGYRFDKKFDGCHYIYSQEYYAIKHWLLPGWLMAVQFFVTVAL 453
PF G W++ +++ PGY F FD +Y YY ++ + V F+++
Sbjct: 177 PFLGNGSWDFGNESYLEPGYNFPFSFDS---LYMTIYYYLEVIATLSAFLYVPIFISLRK 233
Query: 454 MLSFAAQV 477
+ A+ V
Sbjct: 234 KSNIASVV 241
>U80027-1|AAC48122.2| 338|Caenorhabditis elegans Serpentine
receptor, class j protein11 protein.
Length = 338
Score = 28.7 bits (61), Expect = 4.5
Identities = 13/52 (25%), Positives = 27/52 (51%)
Frame = +1
Query: 454 MLSFAAQVLLACVIVRWPLKTVLRYEWIFVFYSFIMVAVSSAFLFLAVAIFG 609
+LSF + C+I ++ +Y ++ + ++ +A S+ L + VAI G
Sbjct: 16 ILSFVCNPIFICLIATEKKASIGKYRYLLIGFAIFDMAYSTVELIVPVAIHG 67
>Z83109-1|CAB05513.1| 339|Caenorhabditis elegans Hypothetical
protein F44G3.1 protein.
Length = 339
Score = 28.3 bits (60), Expect = 5.9
Identities = 13/53 (24%), Positives = 25/53 (47%)
Frame = +1
Query: 415 WLMAVQFFVTVALMLSFAAQVLLACVIVRWPLKTVLRYEWIFVFYSFIMVAVS 573
W+ + T+ LS + +L +I P KT RY+++ +S + + S
Sbjct: 6 WIELTSYAETIGFSLSISLNSVLLLLISMMPKKTFGRYKYLMFSFSVLGIIYS 58
>Z82278-8|CAB05251.2| 312|Caenorhabditis elegans Hypothetical
protein M162.8 protein.
Length = 312
Score = 28.3 bits (60), Expect = 5.9
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = +1
Query: 241 YWMESYPEMFSPFKHMGLWEYCFDNFRFP 327
YW+ + E + ++ GL YC +NF+ P
Sbjct: 73 YWIHLHSECWCSTRNTGLGGYCTNNFKNP 101
>Z81544-5|CAB04430.2| 323|Caenorhabditis elegans Hypothetical
protein F49C5.1 protein.
Length = 323
Score = 27.9 bits (59), Expect = 7.8
Identities = 26/128 (20%), Positives = 58/128 (45%), Gaps = 9/128 (7%)
Frame = +1
Query: 352 DGCHYIYSQEYYAIKHWLLPGWLMAVQFF----VTVALMLSFAAQVLLACVIVRWPLKTV 519
+GCHY+++++Y + P +A F +T+ ++ +F + +L +++ P TV
Sbjct: 162 EGCHYLFNRDYLGWIGEVTPCTEVAQNIFFGVMLTITVVTTFCSVLLFMKLVLNSPDPTV 221
Query: 520 LRYEWIFVF---YSFIMVAVSSAFLFLAVAIFGGNCYRRDWLLYPSFNVLSWSYAF--AV 684
+ + I+ A+ + L + ++ Y L+ F LS+S F +
Sbjct: 222 SSAQLEYRHRKNRKLIIQAIVQSILIIVDSLNSTITYNIFPNLFFQFITLSFSMVFLRTL 281
Query: 685 IAFILFGL 708
F++F +
Sbjct: 282 EGFVIFSI 289
>Z69361-2|CAA93288.1| 2165|Caenorhabditis elegans Hypothetical protein
F25H8.3 protein.
Length = 2165
Score = 27.9 bits (59), Expect = 7.8
Identities = 12/18 (66%), Positives = 13/18 (72%), Gaps = 1/18 (5%)
Frame = -2
Query: 615 VPTEYC-HSKKEESTRNC 565
+P EYC H KE STRNC
Sbjct: 1401 LPDEYCNHLDKEVSTRNC 1418
>Z69360-10|CAA93287.1| 2165|Caenorhabditis elegans Hypothetical
protein F25H8.3 protein.
Length = 2165
Score = 27.9 bits (59), Expect = 7.8
Identities = 12/18 (66%), Positives = 13/18 (72%), Gaps = 1/18 (5%)
Frame = -2
Query: 615 VPTEYC-HSKKEESTRNC 565
+P EYC H KE STRNC
Sbjct: 1401 LPDEYCNHLDKEVSTRNC 1418
>Z49126-5|CAA88940.3| 1270|Caenorhabditis elegans Hypothetical
protein DH11.3 protein.
Length = 1270
Score = 27.9 bits (59), Expect = 7.8
Identities = 21/72 (29%), Positives = 32/72 (44%), Gaps = 5/72 (6%)
Frame = +2
Query: 194 SPMWGLYFSSFHLLVL---TGWNHIQKCSLHSN--IWDCGSIALIISGSLVTGLTKNLMG 358
S W +F L V+ TG + C L+ N I G + LI++ VTG L+G
Sbjct: 299 STFWAGFFDGLALFVIYFITGISLFFGCRLYFNQEIGKAGDVILIVNTICVTGYFLGLLG 358
Query: 359 VTISTAKNIMQS 394
+S+ + S
Sbjct: 359 PHMSSLQQAATS 370
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,093,039
Number of Sequences: 27780
Number of extensions: 424135
Number of successful extensions: 1263
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1185
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1261
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1708383636
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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