Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte4p15
         (687 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U29380-14|AAA68746.2|  293|Caenorhabditis elegans Trypsin-like p...    61   8e-10
U58751-11|AAB00662.1|  265|Caenorhabditis elegans Trypsin-like p...    47   1e-05
U70848-2|AAB09110.4|  313|Caenorhabditis elegans Trypsin-like pr...    36   0.036
U97408-1|AAB93344.2|  360|Caenorhabditis elegans Trypsin-like pr...    31   0.58 
EF473216-1|ABQ42568.1|  262|Caenorhabditis elegans endoplasmic r...    29   3.1  
AF039719-9|AAB96749.3|  262|Caenorhabditis elegans Hypothetical ...    29   3.1  
Z19157-6|CAA79569.2| 1556|Caenorhabditis elegans Hypothetical pr...    28   5.4  
AF003384-12|AAB54236.2|  331|Caenorhabditis elegans Trypsin-like...    28   5.4  
U55857-5|AAA98031.1|  602|Caenorhabditis elegans Hypothetical pr...    28   7.2  
AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical ...    28   7.2  

>U29380-14|AAA68746.2|  293|Caenorhabditis elegans Trypsin-like
           protease protein 1 protein.
          Length = 293

 Score = 60.9 bits (141), Expect = 8e-10
 Identities = 44/145 (30%), Positives = 69/145 (47%), Gaps = 2/145 (1%)
 Frame = +3

Query: 249 TNPQRIIGGSTTTIDRYPGIVSLLFTRNWSQWWQNCGGNLLNQRSVLSAAHCTFGD-QTA 425
           T   R+IGGS ++   +P  V LL      +    CGG+L++   VL+AAHC   D +  
Sbjct: 53  TLDHRLIGGSESSPHSWPWTVQLLSRLGHHR----CGGSLIDPNFVLTAAHCFAKDRRPT 108

Query: 426 AWRFRVGSTWANSGGVVHLLNRIIYHPNYN-RFTADSDLCILRSSTNIVLNNNVRPVNIA 602
           ++  RVG   + SG   H +  +  HP YN  F +  D  I+R    +  +   RP+ + 
Sbjct: 109 SYSVRVGGHRSGSGS-PHRVTAVSIHPWYNIGFPSSYDFAIMRIHPPVNTSTTARPICL- 166

Query: 603 GANYNLADNQPVWAAGWGATSLGGS 677
             +    +N+     GWG+T  G S
Sbjct: 167 -PSLPAVENRLCVVTGWGSTIEGSS 190


>U58751-11|AAB00662.1|  265|Caenorhabditis elegans Trypsin-like
           protease protein 2 protein.
          Length = 265

 Score = 46.8 bits (106), Expect = 1e-05
 Identities = 34/141 (24%), Positives = 63/141 (44%), Gaps = 5/141 (3%)
 Frame = +3

Query: 261 RIIGGSTTTIDRYPGIVSLLFTRNWSQWWQNCGGNLLNQRSVLSAAHCTFGDQTAAWRFR 440
           R++GG  T    +P   +L   RN +    +CG ++L++  +++AAHC   D+  +    
Sbjct: 26  RVVGGFETVPGAFPWTAAL---RNKATKAHHCGASILDKTHLITAAHCFEEDERVSSYEV 82

Query: 441 VGSTWANS----GGVVHLLNRIIYHPNYNRFTADSDLCILR-SSTNIVLNNNVRPVNIAG 605
           V   W N+       +  L RI ++P Y    +  D+ IL      I  N   +P+ +  
Sbjct: 83  VVGDWDNNQTDGNEQIFYLQRIHFYPLYKDIFS-HDIAILEIPYPGIEFNEYAQPICLPS 141

Query: 606 ANYNLADNQPVWAAGWGATSL 668
            ++     +    +GWG+  L
Sbjct: 142 KDFVYTPGRQCVVSGWGSMGL 162


>U70848-2|AAB09110.4|  313|Caenorhabditis elegans Trypsin-like
           protease protein 3 protein.
          Length = 313

 Score = 35.5 bits (78), Expect = 0.036
 Identities = 29/102 (28%), Positives = 51/102 (50%)
 Frame = +3

Query: 261 RIIGGSTTTIDRYPGIVSLLFTRNWSQWWQNCGGNLLNQRSVLSAAHCTFGDQTAAWRFR 440
           RIIGG++  ID     ++ L +   +     CG  +++   +++AAHC    QT ++ + 
Sbjct: 37  RIIGGNS--IDDGANWMAKLVSYGDNGQGILCGATVIDDFWLVTAAHCALQLQTRSFVY- 93

Query: 441 VGSTWANSGGVVHLLNRIIYHPNYNRFTADSDLCILRSSTNI 566
           V     N      +    I H  YN  TAD+D+ +LR S+++
Sbjct: 94  VREPKNNRERSFSVKEAYI-HSGYNNQTADNDIALLRISSDL 134


>U97408-1|AAB93344.2|  360|Caenorhabditis elegans Trypsin-like
           protease protein 6 protein.
          Length = 360

 Score = 31.5 bits (68), Expect = 0.58
 Identities = 18/61 (29%), Positives = 28/61 (45%), Gaps = 4/61 (6%)
 Frame = +3

Query: 261 RIIGGSTTTIDRYPGIVSL-LFT--RNWSQWW-QNCGGNLLNQRSVLSAAHCTFGDQTAA 428
           +I  G    ID  P  V +  +T  +N  + W ++C G L + R +L+A HC        
Sbjct: 40  KIFNGRKAEIDEAPWAVRINTYTNVKNIDETWSKHCSGTLTSPRHILTATHCAATYTETE 99

Query: 429 W 431
           W
Sbjct: 100 W 100


>EF473216-1|ABQ42568.1|  262|Caenorhabditis elegans endoplasmic
           reticulum-like protein protein.
          Length = 262

 Score = 29.1 bits (62), Expect = 3.1
 Identities = 16/52 (30%), Positives = 30/52 (57%), Gaps = 2/52 (3%)
 Frame = +3

Query: 414 DQTAAWRFRVGSTWANSGGVVHLLNRIIYHPNYNRFTADSD--LCILRSSTN 563
           D  A+ +  + S  A +GG  +LLN  +   N   +T D+D  +C++++S+N
Sbjct: 59  DGIASSKRTLESLLARNGGHQNLLNEEVNKLNNKNYTLDADGRVCLVKNSSN 110


>AF039719-9|AAB96749.3|  262|Caenorhabditis elegans Hypothetical
           protein K04F10.3 protein.
          Length = 262

 Score = 29.1 bits (62), Expect = 3.1
 Identities = 16/52 (30%), Positives = 30/52 (57%), Gaps = 2/52 (3%)
 Frame = +3

Query: 414 DQTAAWRFRVGSTWANSGGVVHLLNRIIYHPNYNRFTADSD--LCILRSSTN 563
           D  A+ +  + S  A +GG  +LLN  +   N   +T D+D  +C++++S+N
Sbjct: 59  DGIASSKRTLESLLARNGGHQNLLNEEVNKLNNKNYTLDADGRVCLVKNSSN 110


>Z19157-6|CAA79569.2| 1556|Caenorhabditis elegans Hypothetical
           protein ZC84.1 protein.
          Length = 1556

 Score = 28.3 bits (60), Expect = 5.4
 Identities = 11/19 (57%), Positives = 13/19 (68%), Gaps = 1/19 (5%)
 Frame = +2

Query: 422 GCMA-FSCWFHLGQQWGCC 475
           GC A + C+F  G QWGCC
Sbjct: 606 GCPANYECYFD-GSQWGCC 623


>AF003384-12|AAB54236.2|  331|Caenorhabditis elegans Trypsin-like
           protease protein 5 protein.
          Length = 331

 Score = 28.3 bits (60), Expect = 5.4
 Identities = 10/17 (58%), Positives = 13/17 (76%)
 Frame = +3

Query: 354 CGGNLLNQRSVLSAAHC 404
           CGG L+  + VL+AAHC
Sbjct: 62  CGGTLITLKHVLTAAHC 78


>U55857-5|AAA98031.1|  602|Caenorhabditis elegans Hypothetical
           protein K08D10.5 protein.
          Length = 602

 Score = 27.9 bits (59), Expect = 7.2
 Identities = 11/18 (61%), Positives = 13/18 (72%), Gaps = 1/18 (5%)
 Frame = -1

Query: 657 HPN-QQPKQVGYQQDCNW 607
           HPN QQ K+  YQ+ CNW
Sbjct: 561 HPNVQQAKRGRYQRSCNW 578


>AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical
            protein Y40C5A.3 protein.
          Length = 2344

 Score = 27.9 bits (59), Expect = 7.2
 Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 2/37 (5%)
 Frame = -2

Query: 344  PLTPIPCKQQR--NNTGVPVNGGCRATNNPLGVCWNS 240
            P++  PC+QQ+  NN G    GGC    N  G   NS
Sbjct: 2115 PISFNPCQQQQQQNNCGGGCGGGCSGGGNSCGGGCNS 2151


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,229,205
Number of Sequences: 27780
Number of extensions: 361696
Number of successful extensions: 958
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 891
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 957
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1571291122
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)