Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte4p15
         (687 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    70   2e-14
AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein ...    26   0.29 
DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related pro...    25   0.51 
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    22   4.8  
DQ855484-1|ABH88171.1|  130|Apis mellifera chemosensory protein ...    21   8.3  
DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GP...    21   8.3  
AJ973401-1|CAJ01448.1|  130|Apis mellifera hypothetical protein ...    21   8.3  
AF481963-1|AAN59784.1|  130|Apis mellifera antennal-specific pro...    21   8.3  

>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 69.7 bits (163), Expect = 2e-14
 Identities = 43/151 (28%), Positives = 74/151 (49%), Gaps = 10/151 (6%)
 Frame = +3

Query: 252 NPQRIIGGSTTTIDRYPGIVSLLFTRNWSQWWQNCGGNLLNQRSVLSAAHCTFGDQTAAW 431
           NP RI+GG+ T I+ +P +  +  T         CG  ++++R VL+AAHC   + T   
Sbjct: 157 NPSRIVGGTNTGINEFPMMAGIKRTYEPGMI---CGATIISKRYVLTAAHCIIDENTTKL 213

Query: 432 RFRVGS-TWAN----SGGVVHLLNRIIYHPNYNRFTAD----SDLCILRSSTNIVLNNNV 584
              VG   W++    +  V+H +N++I HP Y+    D    +D+ +L++  +I   + V
Sbjct: 214 AIVVGEHDWSSKTETNATVLHSINKVIIHPKYDIIEKDDWQINDIALLKTEKDIKFGDKV 273

Query: 585 RPVNIAGANY-NLADNQPVWAAGWGATSLGG 674
            P  +   ++ +      V   GWG TS  G
Sbjct: 274 GPACLPFQHFLDSFAGSDVTVLGWGHTSFNG 304


>AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein
           protein.
          Length = 352

 Score = 26.2 bits (55), Expect = 0.29
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = -1

Query: 474 QHPHCWPRWNQHENAMQPFDHRMCNEQ 394
           QHPH  P+  QH++  Q   H   +EQ
Sbjct: 175 QHPHMQPQQGQHQSQAQQ-QHLQAHEQ 200


>DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related
           protein STG-1 protein.
          Length = 397

 Score = 25.4 bits (53), Expect = 0.51
 Identities = 12/29 (41%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
 Frame = +3

Query: 459 NSGGVVHLLNRIIYHPNYNRFTADSD-LC 542
           N GGV HL N  ++H N++     S  LC
Sbjct: 269 NYGGVYHLDNHHVHHANHHAILGHSGFLC 297


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = -1

Query: 573 SKLCWWNCVRCRGHCQ 526
           +KL W N  RC G  Q
Sbjct: 116 AKLAWRNATRCIGRIQ 131


>DQ855484-1|ABH88171.1|  130|Apis mellifera chemosensory protein 3
           protein.
          Length = 130

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = -2

Query: 419 LITECAMSSRKNRSLVKKV 363
           L T+C   + K R ++KKV
Sbjct: 72  LATDCKKCTDKQREVIKKV 90


>DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GPCR
           protein.
          Length = 381

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 7/22 (31%), Positives = 13/22 (59%)
 Frame = +3

Query: 483 LNRIIYHPNYNRFTADSDLCIL 548
           +N + Y P    ++ADS +C +
Sbjct: 182 VNLVEYPPESGNYSADSAMCAM 203


>AJ973401-1|CAJ01448.1|  130|Apis mellifera hypothetical protein
           protein.
          Length = 130

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = -2

Query: 419 LITECAMSSRKNRSLVKKV 363
           L T+C   + K R ++KKV
Sbjct: 72  LATDCKKCTDKQREVIKKV 90


>AF481963-1|AAN59784.1|  130|Apis mellifera antennal-specific
           protein 3c precursor protein.
          Length = 130

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = -2

Query: 419 LITECAMSSRKNRSLVKKV 363
           L T+C   + K R ++KKV
Sbjct: 72  LATDCKKCTDKQREVIKKV 90


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 197,969
Number of Sequences: 438
Number of extensions: 4578
Number of successful extensions: 20
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20952180
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)