Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte4p14
(698 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_03_0383 + 15179587-15180162,15180334-15181149,15181548-15182789 33 0.22
08_01_0973 + 9803917-9804519,9804691-9805596,9805908-9807149 33 0.29
06_03_0228 - 18439659-18440900,18441212-18441736,18441813-184421... 33 0.29
04_03_0328 + 14440877-14441479,14441650-14441955,14442032-14442637 33 0.29
12_02_0507 + 19810446-19811048,19811220-19811466,19811590-198121... 32 0.38
04_03_0101 - 11242252-11243295,11243607-11244131,11244208-112445... 32 0.38
03_03_0164 - 14979364-14979479,14979613-14980102 31 1.2
01_05_0369 - 21468204-21468595,21471417-21471606,21471680-214718... 31 1.2
11_01_0638 + 5106962-5107553,5108107-5108303,5108955-5110196 30 1.5
01_06_0872 + 32609792-32610178,32611262-32611387,32611477-326115... 30 1.5
04_04_1142 + 31194801-31194952,31195548-31196037,31196463-311965... 30 2.0
12_02_0604 + 20920609-20922144 29 2.7
09_06_0096 - 20840855-20841994 29 2.7
01_06_1817 - 40091188-40092198 29 2.7
01_01_0684 + 5255634-5256029,5256222-5256326 29 2.7
03_06_0195 + 32256771-32258792 29 3.5
03_06_0146 - 31976538-31978643,31978653-31978751 29 3.5
12_02_0285 - 16828173-16828661 29 4.7
06_01_0926 - 7139220-7139318,7139394-7139478,7139573-7139643,713... 29 4.7
05_03_0200 + 9752625-9753182 29 4.7
02_04_0313 - 21947115-21948021,21948102-21948172 29 4.7
10_07_0119 + 13042477-13042864,13044114-13044259,13046104-13046697 28 6.2
07_03_0676 + 20618677-20618840,20618938-20619502 28 6.2
04_04_1224 + 31858110-31858338,31859180-31859301,31859398-318595... 28 6.2
01_05_0022 + 17256475-17256480,17256521-17256871 28 6.2
10_08_0558 + 18756797-18756887,18757189-18757262,18759881-187600... 28 8.2
07_01_0946 + 7975519-7976550,7977092-7977141,7977342-7977462 28 8.2
04_04_1582 - 34590698-34591199,34593849-34594690 28 8.2
04_04_0987 + 29938486-29938505,29938667-29938859,29938961-29941036 28 8.2
04_04_0613 + 26617677-26617963,26618726-26618786,26619598-266198... 28 8.2
03_03_0241 - 15757331-15757423,15757536-15757643,15758487-157587... 28 8.2
03_01_0088 - 711358-712010,712104-712482 28 8.2
>04_03_0383 + 15179587-15180162,15180334-15181149,15181548-15182789
Length = 877
Score = 33.1 bits (72), Expect = 0.22
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = +2
Query: 518 PPRAQGERGRDRLAQGEGQELGDGVAGGPGQARG 619
PP A G RGR R +G G+ G + G G +RG
Sbjct: 87 PPAAGGGRGRSRGGRGGGRGRGRSLTNGAGSSRG 120
>08_01_0973 + 9803917-9804519,9804691-9805596,9805908-9807149
Length = 916
Score = 32.7 bits (71), Expect = 0.29
Identities = 15/34 (44%), Positives = 18/34 (52%)
Frame = +2
Query: 518 PPRAQGERGRDRLAQGEGQELGDGVAGGPGQARG 619
PP A G RGR R +G G+ G + G G RG
Sbjct: 96 PPAAGGGRGRSRGGRGGGRGRGRSLTNGAGSGRG 129
>06_03_0228 -
18439659-18440900,18441212-18441736,18441813-18442118,
18442290-18442877
Length = 886
Score = 32.7 bits (71), Expect = 0.29
Identities = 15/34 (44%), Positives = 18/34 (52%)
Frame = +2
Query: 518 PPRAQGERGRDRLAQGEGQELGDGVAGGPGQARG 619
PP A G RGR R +G G+ G + G G RG
Sbjct: 91 PPAAGGGRGRSRGGRGGGRGRGRSLTNGAGSGRG 124
>04_03_0328 + 14440877-14441479,14441650-14441955,14442032-14442637
Length = 504
Score = 32.7 bits (71), Expect = 0.29
Identities = 15/34 (44%), Positives = 18/34 (52%)
Frame = +2
Query: 518 PPRAQGERGRDRLAQGEGQELGDGVAGGPGQARG 619
PP A G RGR R +G G+ G + G G RG
Sbjct: 96 PPAAGGGRGRSRGGRGGGRGRGRSLTNGAGSGRG 129
>12_02_0507 +
19810446-19811048,19811220-19811466,19811590-19812125,
19812397-19813620
Length = 869
Score = 32.3 bits (70), Expect = 0.38
Identities = 15/34 (44%), Positives = 18/34 (52%)
Frame = +2
Query: 518 PPRAQGERGRDRLAQGEGQELGDGVAGGPGQARG 619
PP A G RGR R +G G+ G + G G RG
Sbjct: 96 PPAAGGGRGRSRGGRGGGRGRGMSLTNGAGSGRG 129
>04_03_0101 -
11242252-11243295,11243607-11244131,11244208-11244513,
11244692-11245231
Length = 804
Score = 32.3 bits (70), Expect = 0.38
Identities = 15/34 (44%), Positives = 18/34 (52%)
Frame = +2
Query: 518 PPRAQGERGRDRLAQGEGQELGDGVAGGPGQARG 619
PP A G RGR R +G G+ G + G G RG
Sbjct: 75 PPAAGGGRGRSRGGRGGGRGRGMSLTNGAGSGRG 108
>03_03_0164 - 14979364-14979479,14979613-14980102
Length = 201
Score = 30.7 bits (66), Expect = 1.2
Identities = 15/32 (46%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
Frame = +2
Query: 530 QGERGRDRLAQGEGQEL-GDGVAGGPGQARGE 622
Q RG+ R +G+ +E G GV GG G+ARG+
Sbjct: 35 QRRRGQRRRGRGQRRERRGSGVGGGNGKARGQ 66
>01_05_0369 -
21468204-21468595,21471417-21471606,21471680-21471867,
21484028-21484580
Length = 440
Score = 30.7 bits (66), Expect = 1.2
Identities = 16/60 (26%), Positives = 27/60 (45%), Gaps = 1/60 (1%)
Frame = +2
Query: 518 PPRAQGERGRDRLAQGEGQELGDGVAGGP-GQARGEEPRHHQQHQAATRGAPEQSERHDL 694
P + RGR + EG++ G G G+A G P ++ + A RG P + ++
Sbjct: 135 PTNRRRRRGRGCTCEAEGEDGAAGRRSGEEGEAAGGRPAPEREKEKAGRGGPLTGDEEEI 194
>11_01_0638 + 5106962-5107553,5108107-5108303,5108955-5110196
Length = 676
Score = 30.3 bits (65), Expect = 1.5
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = +2
Query: 518 PPRAQGERGRDRLAQGEGQELGDGVAGGPGQARG 619
PP A G RGR R +G G+ G + G RG
Sbjct: 96 PPAAGGGRGRSRGGRGGGRGRGRSLTNSAGSGRG 129
>01_06_0872 +
32609792-32610178,32611262-32611387,32611477-32611550,
32611944-32612013,32612088-32612143,32612236-32612307,
32612384-32612478,32612660-32612726,32612809-32612938,
32613135-32613350,32613461-32613591,32614044-32614218,
32614292-32614382,32614653-32614810,32615059-32615247,
32615551-32615564,32616003-32616228
Length = 758
Score = 30.3 bits (65), Expect = 1.5
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = +2
Query: 521 PRAQGERGRDRLAQGEGQELGDGVAGGPGQ 610
P G RGR R +G G+ G G AGG G+
Sbjct: 35 PTVAGRRGRGRGGRGGGRATGRGRAGGRGR 64
>04_04_1142 +
31194801-31194952,31195548-31196037,31196463-31196546,
31196611-31196682,31196967-31197026,31197299-31197310
Length = 289
Score = 29.9 bits (64), Expect = 2.0
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +2
Query: 521 PRAQGERGRDRLAQGEGQELGDGVAGGPGQARGEEP 628
P G+ GR+ A+G G ++ +A PGQA+G P
Sbjct: 173 PLQGGQLGREDGARGAGDQVHHALAACPGQAQGLVP 208
>12_02_0604 + 20920609-20922144
Length = 511
Score = 29.5 bits (63), Expect = 2.7
Identities = 17/38 (44%), Positives = 23/38 (60%)
Frame = +3
Query: 525 ELKVKEEEIDLLKARVKNLETELQAALAKPGGKNQDII 638
ELKV + + ARV +LE EL+AA+AK G D +
Sbjct: 247 ELKVLGAKKAEMDARVVSLEAELKAAVAKRGELEADAV 284
>09_06_0096 - 20840855-20841994
Length = 379
Score = 29.5 bits (63), Expect = 2.7
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = +2
Query: 524 RAQGERGRDRLAQGEGQELGDGVAGGPGQA 613
R+ G RG++R A G G G G AGG G +
Sbjct: 18 RSHGRRGQERRAAGRG-AAGGGAAGGGGSS 46
>01_06_1817 - 40091188-40092198
Length = 336
Score = 29.5 bits (63), Expect = 2.7
Identities = 18/46 (39%), Positives = 22/46 (47%)
Frame = -2
Query: 352 TGLSAEASFSVPSGCSVSASAEIGSNVSIFTTTNVGCSSLGADAGA 215
TG+ A A +G A A IG+NV VG + GA AGA
Sbjct: 197 TGVGAGAGAGAGAGVGAGARAGIGANVGANVGAGVGAGA-GAGAGA 241
>01_01_0684 + 5255634-5256029,5256222-5256326
Length = 166
Score = 29.5 bits (63), Expect = 2.7
Identities = 16/42 (38%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = +2
Query: 539 RGRDRLAQGEGQELGDGVAGGPGQARGEE-PRHHQQHQAATR 661
RGR R +GE +L + G G A GEE R ++ + A R
Sbjct: 27 RGRCRCREGEAHQLPEQAEAGAGVAEGEEGGRERRKRRKARR 68
>03_06_0195 + 32256771-32258792
Length = 673
Score = 29.1 bits (62), Expect = 3.5
Identities = 11/40 (27%), Positives = 22/40 (55%)
Frame = +3
Query: 294 DAETEQPEGTEKEASADKPVENNQTETKAGNTDDVIDNNA 413
D+ +++ E+E+ D+ ++ + E GN D IDN +
Sbjct: 282 DSYSDEEIDDEEESDCDEEIDEEEEEEHGGNKYDAIDNES 321
>03_06_0146 - 31976538-31978643,31978653-31978751
Length = 734
Score = 29.1 bits (62), Expect = 3.5
Identities = 11/40 (27%), Positives = 22/40 (55%)
Frame = +3
Query: 294 DAETEQPEGTEKEASADKPVENNQTETKAGNTDDVIDNNA 413
D+ +++ E+E+ D+ ++ + E GN D IDN +
Sbjct: 340 DSYSDEEIDDEEESDCDEEIDEEEEEEHGGNKYDAIDNES 379
>12_02_0285 - 16828173-16828661
Length = 162
Score = 28.7 bits (61), Expect = 4.7
Identities = 15/46 (32%), Positives = 21/46 (45%)
Frame = +2
Query: 551 RLAQGEGQELGDGVAGGPGQARGEEPRHHQQHQAATRGAPEQSERH 688
R +G+G++ GV G GEE +A R A +S RH
Sbjct: 98 RKEEGDGEKAAPGVTSRNGGQAGEEEVAAMLEEATVRPAGARSRRH 143
>06_01_0926 - 7139220-7139318,7139394-7139478,7139573-7139643,
7139996-7140076,7140805-7140895,7141242-7141330,
7141749-7141802,7141906-7142085,7142175-7142237,
7142575-7142705,7142807-7142900,7143343-7143684,
7143957-7144348,7145010-7148487,7149101-7149187,
7149324-7149367,7149495-7149591,7150429-7150572
Length = 1873
Score = 28.7 bits (61), Expect = 4.7
Identities = 13/49 (26%), Positives = 26/49 (53%), Gaps = 4/49 (8%)
Frame = +3
Query: 270 ETFEPISADAETEQPEG----TEKEASADKPVENNQTETKAGNTDDVID 404
+T +P++ + E E+ +G T+ A +KP+E ++ K V+D
Sbjct: 1185 QTEDPVTLEKEPEEDKGSVEPTQDNAGLEKPLEEDEASAKPSEDSVVLD 1233
>05_03_0200 + 9752625-9753182
Length = 185
Score = 28.7 bits (61), Expect = 4.7
Identities = 19/62 (30%), Positives = 27/62 (43%), Gaps = 5/62 (8%)
Frame = +2
Query: 518 PPRAQGERG-----RDRLAQGEGQELGDGVAGGPGQARGEEPRHHQQHQAATRGAPEQSE 682
P QG+RG R +G+G + GV+ G GEE +A R A ++
Sbjct: 96 PALRQGDRGGWRRPARRKGKGDGGNVASGVSARNGGQAGEEEVAATLEEATARPAGARAR 155
Query: 683 RH 688
RH
Sbjct: 156 RH 157
>02_04_0313 - 21947115-21948021,21948102-21948172
Length = 325
Score = 28.7 bits (61), Expect = 4.7
Identities = 14/31 (45%), Positives = 15/31 (48%), Gaps = 1/31 (3%)
Frame = +2
Query: 557 AQGEGQELGDGVAGGPGQARGE-EPRHHQQH 646
A G GDG GG G+ GE E HH H
Sbjct: 48 APGAPVAAGDGAVGGAGEGEGEGEVLHHAWH 78
>10_07_0119 + 13042477-13042864,13044114-13044259,13046104-13046697
Length = 375
Score = 28.3 bits (60), Expect = 6.2
Identities = 15/33 (45%), Positives = 20/33 (60%)
Frame = +2
Query: 518 PPRAQGERGRDRLAQGEGQELGDGVAGGPGQAR 616
PPRA+ +R R+ A E +E G+G A G G R
Sbjct: 89 PPRARKKRVREACADEEEEEEGEG-ADGAGSPR 120
>07_03_0676 + 20618677-20618840,20618938-20619502
Length = 242
Score = 28.3 bits (60), Expect = 6.2
Identities = 23/73 (31%), Positives = 32/73 (43%), Gaps = 2/73 (2%)
Frame = +2
Query: 443 AKGEGAP-REDQXXXXXXXXXXXXXTPPRAQG-ERGRDRLAQGEGQELGDGVAGGPGQAR 616
A+ +GAP R ++ RA G R + R +G G G G AGG A
Sbjct: 160 ARPDGAPARRERRLEAAGAEEREGRRRERASGGHRAKRRAGRGGG---GGGDAGGGDGAA 216
Query: 617 GEEPRHHQQHQAA 655
G R H++ +AA
Sbjct: 217 GARSRRHRRLEAA 229
>04_04_1224 +
31858110-31858338,31859180-31859301,31859398-31859507,
31859661-31859725,31859940-31860004,31860387-31860632,
31861212-31861313,31861484-31861534,31862015-31862105,
31862777-31862841
Length = 381
Score = 28.3 bits (60), Expect = 6.2
Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Frame = -2
Query: 436 SPSILMAGALLSMTSSVLPAFVS--V*LFSTGLSAEASFSVPSGCSVSASAEIGSNVS 269
SPS + +L+ SV P ++S V TGL + SVP G S+S+ A +N++
Sbjct: 209 SPSFASSRPVLAAAPSVNPIYISNSVAGVPTGLPVFETNSVPGGSSLSSKAVHYNNLA 266
>01_05_0022 + 17256475-17256480,17256521-17256871
Length = 118
Score = 28.3 bits (60), Expect = 6.2
Identities = 18/55 (32%), Positives = 25/55 (45%), Gaps = 2/55 (3%)
Frame = +2
Query: 527 AQGERGRDRLAQGEGQELGDGVAGGPGQARGEEPRHHQQH--QAATRGAPEQSER 685
A+GE+ + L G +G+G GG G R Q+ +AA RG ER
Sbjct: 49 ARGEKEVEALGDGNSGGIGEGGGGGDGGGARRCGRRWQRREAEAAARGESGGGER 103
>10_08_0558 +
18756797-18756887,18757189-18757262,18759881-18760069,
18760190-18760309,18760457-18760521,18760684-18760828,
18761304-18763337,18763904-18764025,18764127-18764309,
18764635-18764690,18765086-18765141
Length = 1044
Score = 27.9 bits (59), Expect = 8.2
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = +3
Query: 525 ELKVKEEEIDLLKARVKNLETE 590
+L V EEID LKA+++NL E
Sbjct: 761 KLSVLSEEIDQLKAKIENLSNE 782
>07_01_0946 + 7975519-7976550,7977092-7977141,7977342-7977462
Length = 400
Score = 27.9 bits (59), Expect = 8.2
Identities = 9/22 (40%), Positives = 17/22 (77%)
Frame = -3
Query: 165 SIIQCLICNILQKIKTQKYERN 100
S+I CL+C++ KIK++ + R+
Sbjct: 358 SLIHCLVCHVYPKIKSKYFTRS 379
>04_04_1582 - 34590698-34591199,34593849-34594690
Length = 447
Score = 27.9 bits (59), Expect = 8.2
Identities = 15/54 (27%), Positives = 23/54 (42%)
Frame = +2
Query: 533 GERGRDRLAQGEGQELGDGVAGGPGQARGEEPRHHQQHQAATRGAPEQSERHDL 694
G+ G + + G G++ G G GG G GE+ Q +G + H L
Sbjct: 229 GDGGVEEGSAGGGKKGGGGGGGGGGGGHGEKGSAKSSEQERRKGIAWTEDEHRL 282
>04_04_0987 + 29938486-29938505,29938667-29938859,29938961-29941036
Length = 762
Score = 27.9 bits (59), Expect = 8.2
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = +3
Query: 558 LKARVKNLETELQAALAKPGGKNQDIINSIKLQHEELLS 674
LK V+ +E E ++A + K +NSIK EE+++
Sbjct: 526 LKKSVERMEAETKSASEEWQSKELSFVNSIKKSEEEIIN 564
>04_04_0613 +
26617677-26617963,26618726-26618786,26619598-26619832,
26619958-26620196,26620493-26620744,26620844-26621024,
26621810-26621898,26622200-26622273,26622365-26622443
Length = 498
Score = 27.9 bits (59), Expect = 8.2
Identities = 12/25 (48%), Positives = 14/25 (56%), Gaps = 1/25 (4%)
Frame = +2
Query: 578 LGDGVAGGPGQ-ARGEEPRHHQQHQ 649
+G+G G P RG P HQQHQ
Sbjct: 11 IGNGRGGNPNYYGRGPPPSQHQQHQ 35
>03_03_0241 -
15757331-15757423,15757536-15757643,15758487-15758710,
15759543-15760110
Length = 330
Score = 27.9 bits (59), Expect = 8.2
Identities = 16/59 (27%), Positives = 27/59 (45%)
Frame = +3
Query: 264 KIETFEPISADAETEQPEGTEKEASADKPVENNQTETKAGNTDDVIDNNAPAIKIEGDW 440
K T + AE E +G ++ASA + E + + DDV++ +EG+W
Sbjct: 105 KRTTLKMDDTGAEEEVGDGVSEDASASEEEEEEE------DDDDVVEEEEEGAGLEGEW 157
>03_01_0088 - 711358-712010,712104-712482
Length = 343
Score = 27.9 bits (59), Expect = 8.2
Identities = 14/38 (36%), Positives = 17/38 (44%)
Frame = +2
Query: 581 GDGVAGGPGQARGEEPRHHQQHQAATRGAPEQSERHDL 694
G GVA PG+ G+ HQQ A + A S L
Sbjct: 14 GGGVATAPGRFAGDAIADHQQAAAGAKNAAATSSARQL 51
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,954,332
Number of Sequences: 37544
Number of extensions: 215533
Number of successful extensions: 1332
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 1231
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1322
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1792053856
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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