Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte4p13
(301 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998 103 3e-23
06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379 102 6e-23
02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467 102 6e-23
03_01_0034 + 318432-318825,318902-319851 99 6e-22
01_06_1060 + 34162161-34162554,34162613-34162675,34163262-341635... 99 7e-22
05_04_0306 + 20058640-20059159,20060406-20060819,20060921-200611... 98 1e-21
01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349 97 3e-21
03_05_0575 + 25747813-25748206,25748567-25748614,25750296-257505... 89 6e-19
05_01_0412 - 3248405-3248458,3248533-3248637,3248950-3249078,324... 49 6e-07
07_03_0994 + 23190344-23190456,23191367-23191581,23191663-231918... 42 9e-05
11_02_0058 + 7879859-7879951,7880844-7881078,7881165-7881535,788... 40 3e-04
03_05_0974 + 29324025-29324117,29325064-29325298,29325385-293257... 40 4e-04
03_02_0186 - 6243487-6243799,6243892-6244400,6244495-6244557,624... 40 4e-04
07_01_1133 - 10550799-10551137,10552195-10552254,10555693-105574... 28 1.6
11_04_0054 - 12895574-12895840,12906985-12908121,12908274-12908591 27 2.1
08_02_1482 - 27428208-27428514,27428605-27428906,27431176-274322... 27 3.6
12_02_0931 + 24512496-24512567,24512705-24512806,24512939-245129... 26 4.7
03_02_0319 - 7421357-7421757,7421768-7421843,7424695-7424796,742... 26 4.7
06_03_0705 - 23707987-23708295,23708532-23708573,23709772-237099... 25 8.3
05_04_0274 - 19636163-19636280,19636359-19636423,19636485-196366... 25 8.3
03_02_0048 - 5265595-5265783,5265882-5265992,5266259-5266547,526... 25 8.3
01_01_0628 - 4731052-4731601,4731825-4732782,4733143-4733953,473... 25 8.3
01_01_0025 + 188915-189132,190625-190705,191350-191506,191958-19... 25 8.3
>03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998
Length = 444
Score = 103 bits (246), Expect = 3e-23
Identities = 44/52 (84%), Positives = 47/52 (90%)
Frame = +2
Query: 146 MREIVHIQAGQCGNQIGXKFWEVISDEHGIDATGAYSGDSDLXLERINVYYN 301
MREI+HIQ GQCGNQIG KFWEVI DEHG+DATG Y+GDSDL LERINVYYN
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGVDATGRYAGDSDLQLERINVYYN 52
>06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379
Length = 446
Score = 102 bits (244), Expect = 6e-23
Identities = 45/52 (86%), Positives = 46/52 (88%)
Frame = +2
Query: 146 MREIVHIQAGQCGNQIGXKFWEVISDEHGIDATGAYSGDSDLXLERINVYYN 301
MREI+HIQ GQCGNQIG KFWEVI DEHGID TG YSGDSDL LERINVYYN
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQLERINVYYN 52
>02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467
Length = 447
Score = 102 bits (244), Expect = 6e-23
Identities = 45/52 (86%), Positives = 46/52 (88%)
Frame = +2
Query: 146 MREIVHIQAGQCGNQIGXKFWEVISDEHGIDATGAYSGDSDLXLERINVYYN 301
MREI+HIQ GQCGNQIG KFWEVI DEHGID TG YSGDSDL LERINVYYN
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQLERINVYYN 52
>03_01_0034 + 318432-318825,318902-319851
Length = 447
Score = 99.1 bits (236), Expect = 6e-22
Identities = 42/52 (80%), Positives = 45/52 (86%)
Frame = +2
Query: 146 MREIVHIQAGQCGNQIGXKFWEVISDEHGIDATGAYSGDSDLXLERINVYYN 301
MREI+HIQ GQCGNQIG KFWEV+ EHGIDATG Y GDSDL LER+NVYYN
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDATGRYDGDSDLQLERVNVYYN 52
>01_06_1060 +
34162161-34162554,34162613-34162675,34163262-34163531,
34163944-34164623
Length = 468
Score = 98.7 bits (235), Expect = 7e-22
Identities = 41/52 (78%), Positives = 46/52 (88%)
Frame = +2
Query: 146 MREIVHIQAGQCGNQIGXKFWEVISDEHGIDATGAYSGDSDLXLERINVYYN 301
MREI+HIQ GQCGNQIG KFWEV+ DEHGID TG Y+G+SDL LER+NVYYN
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCDEHGIDPTGRYTGNSDLQLERVNVYYN 52
>05_04_0306 +
20058640-20059159,20060406-20060819,20060921-20061190,
20062179-20062849
Length = 624
Score = 97.9 bits (233), Expect = 1e-21
Identities = 41/52 (78%), Positives = 45/52 (86%)
Frame = +2
Query: 146 MREIVHIQAGQCGNQIGXKFWEVISDEHGIDATGAYSGDSDLXLERINVYYN 301
MREI+HIQ GQCGNQIG KFWEV+ DEHGID TG Y+G SDL LER+NVYYN
Sbjct: 181 MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYAGTSDLQLERVNVYYN 232
>01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349
Length = 447
Score = 96.7 bits (230), Expect = 3e-21
Identities = 41/52 (78%), Positives = 44/52 (84%)
Frame = +2
Query: 146 MREIVHIQAGQCGNQIGXKFWEVISDEHGIDATGAYSGDSDLXLERINVYYN 301
MREI+HIQ GQCGNQIG KFWEV+ DEHGID TG Y G SDL LER+NVYYN
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYVGTSDLQLERVNVYYN 52
>03_05_0575 +
25747813-25748206,25748567-25748614,25750296-25750565,
25750658-25751334
Length = 462
Score = 89.0 bits (211), Expect = 6e-19
Identities = 38/52 (73%), Positives = 42/52 (80%)
Frame = +2
Query: 146 MREIVHIQAGQCGNQIGXKFWEVISDEHGIDATGAYSGDSDLXLERINVYYN 301
MREI+HIQ GQCGNQIG KFWEVI EHG+D TG Y+G S LERINVY+N
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICGEHGVDPTGTYTGTSPQQLERINVYFN 52
>05_01_0412 -
3248405-3248458,3248533-3248637,3248950-3249078,
3249279-3249353,3249520-3249624,3249714-3249767,
3249970-3250370,3250583-3250694,3250886-3251086,
3251844-3251972
Length = 454
Score = 49.2 bits (112), Expect = 6e-07
Identities = 22/50 (44%), Positives = 31/50 (62%)
Frame = +2
Query: 149 REIVHIQAGQCGNQIGXKFWEVISDEHGIDATGAYSGDSDLXLERINVYY 298
REI+ IQ GQCGNQIG +FW+ + EHGI G + +R +V++
Sbjct: 3 REIITIQVGQCGNQIGMEFWKQLCLEHGIGKDGLLEDFATQGGDRKDVFF 52
>07_03_0994 +
23190344-23190456,23191367-23191581,23191663-23191862,
23192420-23192928,23193048-23193363
Length = 450
Score = 41.9 bits (94), Expect = 9e-05
Identities = 19/54 (35%), Positives = 30/54 (55%), Gaps = 2/54 (3%)
Frame = +2
Query: 146 MREIVHIQAGQCGNQIGXKFWEVISDEHGIDATGAYSGDSDLXL--ERINVYYN 301
MREI+ I GQ G Q+G WE+ EHGI+ G D+ + + + N +++
Sbjct: 1 MREIISIHIGQAGIQVGNACWELYCLEHGIEPDGTMPSDTTVGVAHDAFNTFFS 54
>11_02_0058 +
7879859-7879951,7880844-7881078,7881165-7881535,
7881648-7882304
Length = 451
Score = 40.3 bits (90), Expect = 3e-04
Identities = 18/39 (46%), Positives = 21/39 (53%)
Frame = +2
Query: 146 MREIVHIQAGQCGNQIGXKFWEVISDEHGIDATGAYSGD 262
MRE + I GQ G Q+G WE+ EHGI G GD
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGD 39
>03_05_0974 +
29324025-29324117,29325064-29325298,29325385-29325755,
29325864-29326520
Length = 451
Score = 39.9 bits (89), Expect = 4e-04
Identities = 18/39 (46%), Positives = 21/39 (53%)
Frame = +2
Query: 146 MREIVHIQAGQCGNQIGXKFWEVISDEHGIDATGAYSGD 262
MRE + I GQ G Q+G WE+ EHGI A G D
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQADGQMPSD 39
>03_02_0186 -
6243487-6243799,6243892-6244400,6244495-6244557,
6245482-6245681,6246125-6246519,6246776-6246888
Length = 530
Score = 39.9 bits (89), Expect = 4e-04
Identities = 18/40 (45%), Positives = 22/40 (55%)
Frame = +2
Query: 146 MREIVHIQAGQCGNQIGXKFWEVISDEHGIDATGAYSGDS 265
MREI+ I GQ G Q+G WE+ EHGI G D+
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGLMPRDA 40
>07_01_1133 -
10550799-10551137,10552195-10552254,10555693-10557401,
10557534-10557616,10577533-10578074
Length = 910
Score = 27.9 bits (59), Expect = 1.6
Identities = 13/38 (34%), Positives = 22/38 (57%), Gaps = 2/38 (5%)
Frame = +2
Query: 182 GNQIGXKFWEVISDEHG--IDATGAYSGDSDLXLERIN 289
G+Q KFW+ + +E G ++ + AY +D ER+N
Sbjct: 540 GSQFTSKFWQKLQEEMGTHLNFSTAYHPQTDGQTERVN 577
>11_04_0054 - 12895574-12895840,12906985-12908121,12908274-12908591
Length = 573
Score = 27.5 bits (58), Expect = 2.1
Identities = 13/38 (34%), Positives = 22/38 (57%), Gaps = 2/38 (5%)
Frame = +2
Query: 182 GNQIGXKFWEVISDEHG--IDATGAYSGDSDLXLERIN 289
G+Q KFW+ + +E G ++ + AY +D ER+N
Sbjct: 331 GSQFTSKFWQKLQEELGTRLNFSTAYHPQTDGQTERVN 368
>08_02_1482 -
27428208-27428514,27428605-27428906,27431176-27432228,
27432305-27432421,27432510-27432843,27433064-27433188,
27433408-27433475,27433555-27433636,27433753-27433866,
27433942-27434042,27434145-27434234,27434615-27434819
Length = 965
Score = 26.6 bits (56), Expect = 3.6
Identities = 16/38 (42%), Positives = 22/38 (57%)
Frame = -2
Query: 123 PPNXILNKHFREFDHVKKKLI*KCNDXPTRVASHTKFS 10
PPN IL R FD V++ L + ND P+ V ++FS
Sbjct: 669 PPNEILKHTPRRFDKVRRSLYPE-NDNPSSV-DRSEFS 704
>12_02_0931 +
24512496-24512567,24512705-24512806,24512939-24512984,
24513292-24513355,24513997-24514348,24514497-24514749,
24515069-24515311,24515399-24515518,24515710-24516158
Length = 566
Score = 26.2 bits (55), Expect = 4.7
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = +2
Query: 146 MREIVHIQAGQCGNQIGXKFW 208
MRE V +Q G N +G FW
Sbjct: 1 MREAVTVQVGGFANYVGSHFW 21
>03_02_0319 -
7421357-7421757,7421768-7421843,7424695-7424796,
7424911-7424982
Length = 216
Score = 26.2 bits (55), Expect = 4.7
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = +2
Query: 146 MREIVHIQAGQCGNQIGXKFW 208
MRE V +Q G N +G FW
Sbjct: 1 MREAVTVQVGGFANYVGSHFW 21
>06_03_0705 -
23707987-23708295,23708532-23708573,23709772-23709957,
23710112-23710222,23710337-23710408,23710499-23710747,
23711052-23711135,23711271-23711456,23711540-23711764
Length = 487
Score = 25.4 bits (53), Expect = 8.3
Identities = 12/38 (31%), Positives = 20/38 (52%)
Frame = +2
Query: 158 VHIQAGQCGNQIGXKFWEVISDEHGIDATGAYSGDSDL 271
V I G + + E +EH + A GA+SG+S++
Sbjct: 14 VGIDNGASRKLLSNESLEERGEEHDVQADGAHSGESEV 51
>05_04_0274 -
19636163-19636280,19636359-19636423,19636485-19636637,
19636738-19637043,19637137-19637314,19637452-19637687,
19637835-19638032,19638171-19638293,19638729-19639013,
19639186-19639326,19639799-19640188,19640465-19640647,
19640934-19641020
Length = 820
Score = 25.4 bits (53), Expect = 8.3
Identities = 12/36 (33%), Positives = 17/36 (47%)
Frame = +1
Query: 121 GVPNF*CNHEGNRPHPGGSMRESDRXKVLGSNLGRA 228
G+P CN+ PH G +SD L +L R+
Sbjct: 510 GIPTLGCNNSYAIPHGSGGFIDSDTLYGLARSLPRS 545
>03_02_0048 -
5265595-5265783,5265882-5265992,5266259-5266547,
5266647-5266903,5266995-5267356,5267447-5267522,
5267618-5267707,5267800-5267891,5267995-5268098,
5268191-5268253,5268609-5268736
Length = 586
Score = 25.4 bits (53), Expect = 8.3
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = -2
Query: 120 PNXILNKHFREFDHVKKKL 64
PN + +K EFDHVKK L
Sbjct: 161 PNAVDSKILGEFDHVKKGL 179
>01_01_0628 -
4731052-4731601,4731825-4732782,4733143-4733953,
4734038-4734241,4734695-4734802,4735930-4736369,
4736463-4736541
Length = 1049
Score = 25.4 bits (53), Expect = 8.3
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = -1
Query: 214 YFPELXSDLIPALTRLDVDDFPHDCTKN 131
+FP L + L +D DDFP DC ++
Sbjct: 243 HFPVLKTVFGTLLQLIDDDDFPLDCKRD 270
>01_01_0025 +
188915-189132,190625-190705,191350-191506,191958-192161,
192248-192356,192401-192496,192724-193994,194200-194384,
194619-195055,197034-197077,197830-199036,199253-199479
Length = 1411
Score = 25.4 bits (53), Expect = 8.3
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = -1
Query: 214 YFPELXSDLIPALTRLDVDDFPHDCTKN 131
+FP L + L +D DDFP DC ++
Sbjct: 186 HFPVLRTVFGTLLQLIDDDDFPLDCKRD 213
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,565,932
Number of Sequences: 37544
Number of extensions: 128740
Number of successful extensions: 245
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 242
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 245
length of database: 14,793,348
effective HSP length: 71
effective length of database: 12,127,724
effective search space used: 339576272
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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