Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte4p13
         (301 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    25   0.27 
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    25   0.27 
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          22   1.9  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      22   1.9  
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    21   2.5  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    21   4.3  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             20   5.7  

>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
           AbsCAM-Ig7B protein.
          Length = 1923

 Score = 24.6 bits (51), Expect = 0.27
 Identities = 15/44 (34%), Positives = 22/44 (50%)
 Frame = -1

Query: 283 AFKLQVGVAAVSTRGVNAVLVRDYFPELXSDLIPALTRLDVDDF 152
           A+K+ V V   ++RG  AVL R   P    DL+  ++ L    F
Sbjct: 131 AYKVDVEVIGGASRGCTAVL-RCVVPSFVKDLVRVVSWLQEPSF 173


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 24.6 bits (51), Expect = 0.27
 Identities = 15/44 (34%), Positives = 22/44 (50%)
 Frame = -1

Query: 283 AFKLQVGVAAVSTRGVNAVLVRDYFPELXSDLIPALTRLDVDDF 152
           A+K+ V V   ++RG  AVL R   P    DL+  ++ L    F
Sbjct: 131 AYKVDVEVIGGASRGCTAVL-RCVVPSFVKDLVRVVSWLQEPSF 173


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 21.8 bits (44), Expect = 1.9
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = +3

Query: 69  FFLHDQILESVYL 107
           FFLH Q+L   YL
Sbjct: 259 FFLHKQVLNRYYL 271


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 21.8 bits (44), Expect = 1.9
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = +3

Query: 69  FFLHDQILESVYL 107
           FFLH Q+L   YL
Sbjct: 259 FFLHKQVLNRYYL 271


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 21.4 bits (43), Expect = 2.5
 Identities = 14/52 (26%), Positives = 22/52 (42%), Gaps = 3/52 (5%)
 Frame = +2

Query: 110 IXFGGFQIFSAIMREIVHIQAGQCGNQIGXKFWE---VISDEHGIDATGAYS 256
           I FG  Q  + +MR +    A    + IG   W    ++SD +  +  G  S
Sbjct: 346 IIFGSDQEVAGVMRAVKRCNATGAFSWIGSDGWSARGLVSDGNEAEVEGTLS 397


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 20.6 bits (41), Expect = 4.3
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = -1

Query: 292 DIDAFKLQVGVAAVSTRGVNAVLV 221
           +++  K  VG   V T+G NAV V
Sbjct: 129 EVNILKSIVGQLQVDTQGENAVKV 152


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 20.2 bits (40), Expect = 5.7
 Identities = 9/23 (39%), Positives = 11/23 (47%)
 Frame = +3

Query: 228 TALTPRVLTAATPTXSLNASMST 296
           T  T    T  TP  + NAS +T
Sbjct: 666 TTTTTTTTTTTTPNTTQNASATT 688


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 75,129
Number of Sequences: 438
Number of extensions: 1503
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 49
effective length of database: 124,881
effective search space used:  6244050
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)