Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte4p10
         (750 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice...    25   1.0  
AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.            24   1.8  
AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor pr...    22   5.3  
DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chlor...    22   7.1  
DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chlor...    22   7.1  
U70841-1|AAC47455.1|  377|Apis mellifera ultraviolet sensitive o...    21   9.3  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    21   9.3  
AF004168-1|AAC13417.1|  377|Apis mellifera blue-sensitive opsin ...    21   9.3  

>AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice
           variant B protein.
          Length = 810

 Score = 24.6 bits (51), Expect = 1.0
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = +2

Query: 206 PKYVTLLDPGAYQISDTDTKKWN 274
           PK+   +D   Y  +D DTKKWN
Sbjct: 365 PKFPRNIDE--YNNNDLDTKKWN 385


>AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.
          Length = 493

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 10/37 (27%), Positives = 18/37 (48%)
 Frame = +3

Query: 102 IEFLHSV*IFNFLGCHLDYFFHKWPSTWKAGFLRPQN 212
           ++FL+ +      G  +D   H WPS  +  + R +N
Sbjct: 190 VDFLNDLVAIGVAGFRVDAAKHMWPSDLRTIYSRVRN 226


>AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor
           protein.
          Length = 501

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 11/41 (26%), Positives = 21/41 (51%)
 Frame = -1

Query: 480 RHYLLRSCKETLLPNQIWYSFHMENVAVVTSYLGNLVFFFL 358
           R++L  +C  T  P+Q    FH+      ++ LG ++  F+
Sbjct: 342 RNHLNSTCSVTNSPHQKKLRFHLAKERKASTTLGIIMSAFI 382


>DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 7/20 (35%), Positives = 14/20 (70%)
 Frame = +2

Query: 20  IDVDLHYLRLFIFYILEYYV 79
           + VDL + R F +Y+++ Y+
Sbjct: 231 LKVDLLFKREFSYYLIQIYI 250


>DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 7/20 (35%), Positives = 14/20 (70%)
 Frame = +2

Query: 20  IDVDLHYLRLFIFYILEYYV 79
           + VDL + R F +Y+++ Y+
Sbjct: 231 LKVDLLFKREFSYYLIQIYI 250


>U70841-1|AAC47455.1|  377|Apis mellifera ultraviolet sensitive
           opsin protein.
          Length = 377

 Score = 21.4 bits (43), Expect = 9.3
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = +2

Query: 329 WTHAIYNPEYRKKNTKLPKY 388
           W +AI +P YR++  K  K+
Sbjct: 334 WIYAINHPRYRQELQKRCKW 353


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 21.4 bits (43), Expect = 9.3
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = +2

Query: 335 HAIYNPEYRKKNTKLPKY 388
           + ++NPE+RK   KL  +
Sbjct: 677 YTVFNPEFRKAFHKLVSF 694


>AF004168-1|AAC13417.1|  377|Apis mellifera blue-sensitive opsin
           protein.
          Length = 377

 Score = 21.4 bits (43), Expect = 9.3
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = +2

Query: 329 WTHAIYNPEYRKKNTKLPKY 388
           W +AI +P YR++  K  K+
Sbjct: 334 WIYAINHPRYRQELQKRCKW 353


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 214,899
Number of Sequences: 438
Number of extensions: 4759
Number of successful extensions: 14
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23510295
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)