Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte4p09
         (754 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    26   0.28 
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    25   0.86 
U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic pr...    22   4.6  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    22   6.0  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   8.0  

>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 26.2 bits (55), Expect = 0.28
 Identities = 11/34 (32%), Positives = 17/34 (50%)
 Frame = -3

Query: 680 LKN*MFFFFDLLYVFVNSNKNCFSVF*ILFLWFN 579
           +KN   F FDL+++     K C       FLW++
Sbjct: 140 VKNASLFIFDLIFLSFRCTKLCKEANKTAFLWYH 173


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 24.6 bits (51), Expect = 0.86
 Identities = 11/49 (22%), Positives = 26/49 (53%), Gaps = 3/49 (6%)
 Frame = +3

Query: 381 KKVEQIDESSHEVSIKDCQSLLDVLNNTRNC---TCEIIAKVVRSNVYI 518
           +K+ +++ + HE    D  SLLD + ++      TCE     + +++++
Sbjct: 602 RKLLELERAQHEFKNGDSSSLLDKMRDSSGAGRITCEKCGNKIDTSLFV 650


>U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic
           protein protein.
          Length = 372

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 10/37 (27%), Positives = 18/37 (48%)
 Frame = +1

Query: 97  YTATKDVLNKQKLSFSYHFLAISKMSTKYHKNCTKDP 207
           +T T D  N+Q+       +   + S++ H+   KDP
Sbjct: 234 FTYTDDGKNQQRTGTELTKMRPKRQSSRRHRKNLKDP 270


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 8/23 (34%), Positives = 10/23 (43%)
 Frame = +1

Query: 238 PDEQLTRKLKPLTTKPLCDCSNC 306
           P     R  +  T +  CDC NC
Sbjct: 274 PQVPSPRSQRRYTGRATCDCPNC 296


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 11/36 (30%), Positives = 20/36 (55%)
 Frame = +3

Query: 486 IAKVVRSNVYIHRGKHKVSDIIDETNVANVSIKPEE 593
           I  V ++   IH+ + +  DIIDE  + ++ I  E+
Sbjct: 305 IGTVSKAGELIHQIQTEDHDIIDEIEMFSLQIANEQ 340


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 169,652
Number of Sequences: 336
Number of extensions: 4006
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20131186
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)