Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte4p09
         (754 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          24   1.3  
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      24   1.3  
D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    24   1.3  
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    24   1.3  
DQ325076-1|ABD14090.1|  191|Apis mellifera complementary sex det...    23   4.1  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    22   7.1  
AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellif...    22   7.1  

>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 11/30 (36%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
 Frame = +1

Query: 643 YNKSKKKNIQFFKS-ETNGYYYFRYDVSPY 729
           YN  + K   F +  E N YYY+  ++ PY
Sbjct: 214 YNDPEYKLDYFMEDVELNAYYYYMREMLPY 243


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 11/30 (36%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
 Frame = +1

Query: 643 YNKSKKKNIQFFKS-ETNGYYYFRYDVSPY 729
           YN  + K   F +  E N YYY+  ++ PY
Sbjct: 214 YNDPEYKLDYFMEDVELNAYYYYMREMLPY 243


>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = +1

Query: 583 NQRNKIQNTLKQFLFELTNTYNKSKK 660
           N  NK + TLK +  ++  TYN  +K
Sbjct: 244 NDPNKTEYTLKIYTHDIPETYNVVRK 269


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = +1

Query: 583 NQRNKIQNTLKQFLFELTNTYNKSKK 660
           N  NK + TLK +  ++  TYN  +K
Sbjct: 244 NDPNKTEYTLKIYTHDIPETYNVVRK 269


>DQ325076-1|ABD14090.1|  191|Apis mellifera complementary sex
           determiner protein.
          Length = 191

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 10/43 (23%), Positives = 18/43 (41%)
 Frame = +1

Query: 595 KIQNTLKQFLFELTNTYNKSKKKNIQFFKSETNGYYYFRYDVS 723
           KI ++L        N YN +   N  +  +  N Y    Y+++
Sbjct: 80  KIISSLSNKTIHNNNNYNNNNYNNYNYNNNNYNNYKKLYYNIN 122


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 10/30 (33%), Positives = 14/30 (46%)
 Frame = +1

Query: 307 TCKDCPDVLKTFSINVTEDSCDFGTKKLSK 396
           +C+ CP   K+     TE  CD G  +  K
Sbjct: 278 SCEACPAHSKSSDYGFTECRCDPGYFRAEK 307


>AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellifera
           ORF for hypotheticalprotein. ).
          Length = 998

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = -3

Query: 575 YVCYVGFIYDIRNFMFSPVYINI 507
           Y+CY+G  Y +     S  +INI
Sbjct: 657 YICYLGKAYLMYAIAGSQCFINI 679


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 187,537
Number of Sequences: 438
Number of extensions: 4364
Number of successful extensions: 10
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23632110
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)