Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte4p08
         (741 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            29   0.20 
AY545988-1|AAS99341.1|  423|Anopheles gambiae carboxypeptidase B...    24   4.3  
AJ627286-1|CAF28572.1|  423|Anopheles gambiae carboxypeptidase B...    24   4.3  
AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific tran...    23   9.9  

>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 28.7 bits (61), Expect = 0.20
 Identities = 11/33 (33%), Positives = 18/33 (54%)
 Frame = -3

Query: 340 CIHWLALCKDKGHRRRGLDQSWTLLHVRCRHGS 242
           C  W  LC +K  ++R L   W L+H   ++G+
Sbjct: 554 CASW-PLCGEKSAKKRKLPSRWYLVHEESKYGA 585


>AY545988-1|AAS99341.1|  423|Anopheles gambiae carboxypeptidase B
           precursor protein.
          Length = 423

 Score = 24.2 bits (50), Expect = 4.3
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = +3

Query: 513 INRELPFQWRRANGE 557
           +NR  PFQW R   E
Sbjct: 257 LNRNFPFQWDRTTSE 271


>AJ627286-1|CAF28572.1|  423|Anopheles gambiae carboxypeptidase B
           protein.
          Length = 423

 Score = 24.2 bits (50), Expect = 4.3
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = +3

Query: 513 INRELPFQWRRANGE 557
           +NR  PFQW R   E
Sbjct: 257 LNRNFPFQWDRTTSE 271


>AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific
           transcription factor FRU-MB protein.
          Length = 759

 Score = 23.0 bits (47), Expect = 9.9
 Identities = 10/28 (35%), Positives = 13/28 (46%)
 Frame = -2

Query: 263 CPLPSRLSQHDS*HFPVHTSRRMEAELC 180
           C L  ++  H   H+ VH   R E  LC
Sbjct: 502 CKLCGKVVTHIRNHYHVHFPGRFECPLC 529


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 797,149
Number of Sequences: 2352
Number of extensions: 17804
Number of successful extensions: 32
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 76091949
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)