Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte4p04
         (756 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U41016-1|AAA82318.1|  203|Caenorhabditis elegans Glutathione s-t...    34   0.095
Z69646-3|CAA93476.2|  630|Caenorhabditis elegans Hypothetical pr...    30   2.0  
AF497828-1|AAM18106.1|  630|Caenorhabditis elegans putative Na-H...    30   2.0  
Z47067-3|CAA87330.2|  446|Caenorhabditis elegans Hypothetical pr...    29   2.7  
AL132949-30|CAB61109.1|  210|Caenorhabditis elegans Hypothetical...    29   2.7  
Z46828-4|CAA86859.1|  207|Caenorhabditis elegans Hypothetical pr...    28   6.2  
AF077546-6|AAC26315.1|  300|Caenorhabditis elegans Hypothetical ...    28   8.2  

>U41016-1|AAA82318.1|  203|Caenorhabditis elegans Glutathione
           s-transferase protein11 protein.
          Length = 203

 Score = 34.3 bits (75), Expect = 0.095
 Identities = 14/56 (25%), Positives = 34/56 (60%)
 Frame = +1

Query: 10  KLTWGDFVYAGMYDYLKAMLQKPDLEQKYPAFRKPIEAVLAIPKVKAYVDAAPRTE 177
           K+++ D     ++ ++ + +  P   +KYP  ++ IE + AI  +K+++++ P+TE
Sbjct: 148 KISYADLAIFHIFWFMNSKIL-PGALRKYPKLQEFIEKITAIDSIKSWINSRPKTE 202


>Z69646-3|CAA93476.2|  630|Caenorhabditis elegans Hypothetical
           protein F57C7.2a protein.
          Length = 630

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 13/31 (41%), Positives = 18/31 (58%)
 Frame = +1

Query: 76  PDLEQKYPAFRKPIEAVLAIPKVKAYVDAAP 168
           P LEQ  P F  P+ ++L   + +AYV A P
Sbjct: 578 PSLEQTLPPFCLPLTSLLTSSRQRAYVSAEP 608


>AF497828-1|AAM18106.1|  630|Caenorhabditis elegans putative Na-H
           exchanger isoform 5a protein.
          Length = 630

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 13/31 (41%), Positives = 18/31 (58%)
 Frame = +1

Query: 76  PDLEQKYPAFRKPIEAVLAIPKVKAYVDAAP 168
           P LEQ  P F  P+ ++L   + +AYV A P
Sbjct: 578 PSLEQTLPPFCLPLTSLLTSSRQRAYVSAEP 608


>Z47067-3|CAA87330.2|  446|Caenorhabditis elegans Hypothetical
           protein C43C3.3 protein.
          Length = 446

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 13/31 (41%), Positives = 19/31 (61%), Gaps = 3/31 (9%)
 Frame = -1

Query: 744 KKDCFNYTD---NPTIDLPCTYSYLKSSQFN 661
           KKD F+      NPT+ +P TYS+ + S +N
Sbjct: 408 KKDSFDMMSAFSNPTVSMPVTYSHYQRSAYN 438


>AL132949-30|CAB61109.1|  210|Caenorhabditis elegans Hypothetical
           protein Y53F4B.35 protein.
          Length = 210

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 17/39 (43%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
 Frame = +1

Query: 67  LQKPDLEQ--KYPAFRKPIEAVLAIPKVKAYVDAAPRTE 177
           LQK  L +  KYP      E V AIP +K +V+A P T+
Sbjct: 171 LQKNQLFEASKYPELAALREKVYAIPAIKKWVEARPDTQ 209


>Z46828-4|CAA86859.1|  207|Caenorhabditis elegans Hypothetical
           protein R03D7.6 protein.
          Length = 207

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 15/54 (27%), Positives = 26/54 (48%)
 Frame = +1

Query: 13  LTWGDFVYAGMYDYLKAMLQKPDLEQKYPAFRKPIEAVLAIPKVKAYVDAAPRT 174
           LTW D   A    +   ++ K     K+P  +   E + AIP++K +++  P T
Sbjct: 155 LTWIDLAIA---QHSADLIAKGGDFSKFPELKAHAEKIQAIPQIKKWIETRPVT 205


>AF077546-6|AAC26315.1|  300|Caenorhabditis elegans Hypothetical
           protein T08E11.2 protein.
          Length = 300

 Score = 27.9 bits (59), Expect = 8.2
 Identities = 15/40 (37%), Positives = 26/40 (65%)
 Frame = -1

Query: 423 VASNVMHIQSCFVNFQTFYYYNTKNERFCNEYKMNIERRN 304
           ++ NV +I S FV+ ++  YYN   +RF   ++M +ER+N
Sbjct: 10  ISENVKNI-SRFVDGES--YYNNLEDRFNIPWRMTLERKN 46


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,596,473
Number of Sequences: 27780
Number of extensions: 310343
Number of successful extensions: 805
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 777
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 805
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1798543458
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)