Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte4p04
         (756 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    23   3.1  
AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    23   3.1  
AF388659-2|AAK71994.1|  463|Apis mellifera 1D-myo-inositol-trisp...    23   3.1  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    23   3.1  
DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chlor...    21   9.4  

>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 10/15 (66%), Positives = 10/15 (66%)
 Frame = +3

Query: 321 SFYIRCKIFHFLYCN 365
           SFYI C I  FLY N
Sbjct: 351 SFYIPCIIMVFLYYN 365


>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 11/25 (44%), Positives = 17/25 (68%)
 Frame = -1

Query: 681 LKSSQFNLFSSHQLTSLSCLFIPET 607
           LK+S F  F+SH++   S LF+ +T
Sbjct: 468 LKASPF--FASHEVVGSSLLFVHDT 490


>AF388659-2|AAK71994.1|  463|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform B protein.
          Length = 463

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 11/25 (44%), Positives = 17/25 (68%)
 Frame = -1

Query: 681 LKSSQFNLFSSHQLTSLSCLFIPET 607
           LK+S F  F+SH++   S LF+ +T
Sbjct: 383 LKASPF--FASHEVVGSSLLFVHDT 405


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 11/25 (44%), Positives = 17/25 (68%)
 Frame = -1

Query: 681 LKSSQFNLFSSHQLTSLSCLFIPET 607
           LK+S F  F+SH++   S LF+ +T
Sbjct: 702 LKASPF--FASHEVVGSSLLFVHDT 724


>DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chloride
           channel protein.
          Length = 428

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 11/32 (34%), Positives = 14/32 (43%)
 Frame = -1

Query: 288 PDSPPNPYSPRFTVLPVFFTLLTKEPI*CLNG 193
           P  PP+   P    L   F + TKE    L+G
Sbjct: 344 PPPPPSSSGPDSAKLDKIFDIATKENAMLLSG 375


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 195,522
Number of Sequences: 438
Number of extensions: 4402
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23753925
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)