Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte4o24
(670 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U97194-4|AAP13781.1| 521|Caenorhabditis elegans Cyclin e protei... 30 1.7
U97194-3|AAK68235.1| 524|Caenorhabditis elegans Cyclin e protei... 30 1.7
AF520616-1|AAM78547.1| 524|Caenorhabditis elegans cyclin E prot... 30 1.7
AF058331-1|AAC63505.1| 524|Caenorhabditis elegans cyclin E prot... 30 1.7
Z81050-1|CAB02850.1| 582|Caenorhabditis elegans Hypothetical pr... 29 2.3
Z78411-4|CAB01645.2| 370|Caenorhabditis elegans Hypothetical pr... 28 5.2
Z49967-7|CAA90257.1| 740|Caenorhabditis elegans Hypothetical pr... 28 5.2
U80954-2|AAK77629.1| 977|Caenorhabditis elegans Defective in ge... 28 5.2
AF016669-1|AAB66098.3| 1758|Caenorhabditis elegans Signal elemen... 28 6.9
U00046-6|AAN65305.1| 422|Caenorhabditis elegans Mammalian zak k... 27 9.1
U00046-5|AAC47047.4| 516|Caenorhabditis elegans Mammalian zak k... 27 9.1
>U97194-4|AAP13781.1| 521|Caenorhabditis elegans Cyclin e protein
1, isoform b protein.
Length = 521
Score = 29.9 bits (64), Expect = 1.7
Identities = 20/95 (21%), Positives = 40/95 (42%), Gaps = 2/95 (2%)
Frame = +3
Query: 321 DTDLDSINIFVPETINNQYIITEDKDTGQDMLHHLDDRPTDIMTSDQRDY--VELHDDGT 494
D S N+ E + + E +D +++ DD D++ +D+ +Y +E D+
Sbjct: 131 DKSSSSDNLAESEESHEMVRLEERQDIEEEIEDDFDDEEEDVV-NDKEEYEEIESEDEDD 189
Query: 495 KPTQQAKYKILKVKNPSRRSMGSRRFIQEEKEDGV 599
P Q + + K + + F+ K DG+
Sbjct: 190 YPVQNEGFAVTKRLMNDEHMVTAPTFLSTAKCDGI 224
>U97194-3|AAK68235.1| 524|Caenorhabditis elegans Cyclin e protein
1, isoform a protein.
Length = 524
Score = 29.9 bits (64), Expect = 1.7
Identities = 20/95 (21%), Positives = 40/95 (42%), Gaps = 2/95 (2%)
Frame = +3
Query: 321 DTDLDSINIFVPETINNQYIITEDKDTGQDMLHHLDDRPTDIMTSDQRDY--VELHDDGT 494
D S N+ E + + E +D +++ DD D++ +D+ +Y +E D+
Sbjct: 134 DKSSSSDNLAESEESHEMVRLEERQDIEEEIEDDFDDEEEDVV-NDKEEYEEIESEDEDD 192
Query: 495 KPTQQAKYKILKVKNPSRRSMGSRRFIQEEKEDGV 599
P Q + + K + + F+ K DG+
Sbjct: 193 YPVQNEGFAVTKRLMNDEHMVTAPTFLSTAKCDGI 227
>AF520616-1|AAM78547.1| 524|Caenorhabditis elegans cyclin E
protein.
Length = 524
Score = 29.9 bits (64), Expect = 1.7
Identities = 20/95 (21%), Positives = 40/95 (42%), Gaps = 2/95 (2%)
Frame = +3
Query: 321 DTDLDSINIFVPETINNQYIITEDKDTGQDMLHHLDDRPTDIMTSDQRDY--VELHDDGT 494
D S N+ E + + E +D +++ DD D++ +D+ +Y +E D+
Sbjct: 134 DKSSSSDNLAESEESHEMVRLEERQDIEEEIEDDFDDEEEDVV-NDKEEYEEIESEDEDD 192
Query: 495 KPTQQAKYKILKVKNPSRRSMGSRRFIQEEKEDGV 599
P Q + + K + + F+ K DG+
Sbjct: 193 YPVQNEGFAVTKRLMNDEHMVTAPTFLSTAKCDGI 227
>AF058331-1|AAC63505.1| 524|Caenorhabditis elegans cyclin E
protein.
Length = 524
Score = 29.9 bits (64), Expect = 1.7
Identities = 20/95 (21%), Positives = 40/95 (42%), Gaps = 2/95 (2%)
Frame = +3
Query: 321 DTDLDSINIFVPETINNQYIITEDKDTGQDMLHHLDDRPTDIMTSDQRDY--VELHDDGT 494
D S N+ E + + E +D +++ DD D++ +D+ +Y +E D+
Sbjct: 134 DKSSSSDNLAESEESHEMVRLEERQDIEEEIEDDFDDEEEDVV-NDKEEYEEIESEDEDD 192
Query: 495 KPTQQAKYKILKVKNPSRRSMGSRRFIQEEKEDGV 599
P Q + + K + + F+ K DG+
Sbjct: 193 YPVQNEGFAVTKRLMNDEHMVTAPTFLSTAKCDGI 227
>Z81050-1|CAB02850.1| 582|Caenorhabditis elegans Hypothetical
protein C50B6.2 protein.
Length = 582
Score = 29.5 bits (63), Expect = 2.3
Identities = 19/107 (17%), Positives = 51/107 (47%)
Frame = +3
Query: 273 HPQDITRRQGVALNKQDTDLDSINIFVPETINNQYIITEDKDTGQDMLHHLDDRPTDIMT 452
+P+D+ + + + ++ + + PET+ ++ + TE K+ +D + D +D
Sbjct: 224 NPEDVPQDERAEIKQKVEEALGVASEEPETVADEAVKTEQKEAEEDSVEK-DVENSDEQN 282
Query: 453 SDQRDYVELHDDGTKPTQQAKYKILKVKNPSRRSMGSRRFIQEEKED 593
++ + VE ++ PT+ + + ++ N + +G + E E+
Sbjct: 283 QEEEEVVE-NEATVDPTEDVEMEGVEEVN-DEKEVGQTAEVDGEAEE 327
>Z78411-4|CAB01645.2| 370|Caenorhabditis elegans Hypothetical
protein F02D8.3 protein.
Length = 370
Score = 28.3 bits (60), Expect = 5.2
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = +3
Query: 126 PLPVTVVAREHFKFKITESNSSRVLVESLR 215
P+PVT+VA ++ +F+ ES R L + LR
Sbjct: 187 PIPVTIVASKYDEFQNFESEKRRHLCQFLR 216
>Z49967-7|CAA90257.1| 740|Caenorhabditis elegans Hypothetical
protein F54C9.9 protein.
Length = 740
Score = 28.3 bits (60), Expect = 5.2
Identities = 36/133 (27%), Positives = 60/133 (45%), Gaps = 4/133 (3%)
Frame = +3
Query: 234 NYDYQPSETEELLHPQDITRRQGVALNKQDTDLDSINIFVPETINNQYIITEDKDTGQDM 413
N DY+P E EE +DI VAL + + DLDS N N ++ ED D Q+
Sbjct: 247 NKDYEPGENEENPTYEDI-----VALEEDEKDLDS-NRKYEHKFNFRF---EDPD--QEF 295
Query: 414 LHHLDDRPTDIMTSD---QRDYVELHDDGTKPTQQAKYKILKVKNPSRRSMGSRRFIQEE 584
+ + M S+ ++D ++ K + K K L +RS ++ + +
Sbjct: 296 IKQYPRTVAESMRSEDSSRKDKRHEREERKKREKAEKKKELAELKKMKRSEIEQKLGKLQ 355
Query: 585 KEDGVAI-ISLDD 620
K G+ I ++LD+
Sbjct: 356 KAAGIHIPLTLDE 368
>U80954-2|AAK77629.1| 977|Caenorhabditis elegans Defective in germ
line developmentprotein 3, isoform a protein.
Length = 977
Score = 28.3 bits (60), Expect = 5.2
Identities = 19/84 (22%), Positives = 36/84 (42%)
Frame = +3
Query: 336 SINIFVPETINNQYIITEDKDTGQDMLHHLDDRPTDIMTSDQRDYVELHDDGTKPTQQAK 515
S + P T Q + + ++ D+ H+ R T + DQ + +HD G + +
Sbjct: 634 STGSYYPSTTPRQRVYEQVRE--DDLRSHIGSRRTSVNGDDQ-NVESMHDQGYERQYPRQ 690
Query: 516 YKILKVKNPSRRSMGSRRFIQEEK 587
++ L+ + R GSR I +
Sbjct: 691 HQRLQKDDQQRWKTGSRGDIHSSR 714
>AF016669-1|AAB66098.3| 1758|Caenorhabditis elegans Signal element on
autosome protein2 protein.
Length = 1758
Score = 27.9 bits (59), Expect = 6.9
Identities = 13/51 (25%), Positives = 26/51 (50%), Gaps = 4/51 (7%)
Frame = +2
Query: 341 QHIRTGNNK*PIHYHRGQGHRTGHASPPGRQTDGHHD----QRPARLRGTP 481
QH++ N H+H+ Q H+ PG ++ H + ++ A+ +G+P
Sbjct: 1045 QHVQQQQNLQNQHHHQQQHHQQNQQQAPGNRSRSHSNVGKMEQEAQRQGSP 1095
>U00046-6|AAN65305.1| 422|Caenorhabditis elegans Mammalian zak
kinase homolog protein1, isoform b protein.
Length = 422
Score = 27.5 bits (58), Expect = 9.1
Identities = 17/67 (25%), Positives = 31/67 (46%), Gaps = 1/67 (1%)
Frame = +3
Query: 201 VESLRRQLMDDNYDYQPSETEELLHPQDITRRQGVAL-NKQDTDLDSINIFVPETINNQY 377
+ SL+ QL + D + + ++H +TRR+ N +DT+ N PE+ +
Sbjct: 342 LSSLQEQLRTPSPDKKVVDENVIIHVPKLTRRRRTTTTNSEDTEKSDTNNKTPESQARRV 401
Query: 378 IITEDKD 398
+ KD
Sbjct: 402 HVHGGKD 408
>U00046-5|AAC47047.4| 516|Caenorhabditis elegans Mammalian zak
kinase homolog protein1, isoform a protein.
Length = 516
Score = 27.5 bits (58), Expect = 9.1
Identities = 17/67 (25%), Positives = 31/67 (46%), Gaps = 1/67 (1%)
Frame = +3
Query: 201 VESLRRQLMDDNYDYQPSETEELLHPQDITRRQGVAL-NKQDTDLDSINIFVPETINNQY 377
+ SL+ QL + D + + ++H +TRR+ N +DT+ N PE+ +
Sbjct: 436 LSSLQEQLRTPSPDKKVVDENVIIHVPKLTRRRRTTTTNSEDTEKSDTNNKTPESQARRV 495
Query: 378 IITEDKD 398
+ KD
Sbjct: 496 HVHGGKD 502
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,226,763
Number of Sequences: 27780
Number of extensions: 325396
Number of successful extensions: 984
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 932
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 983
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1508017654
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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