BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte4o23
(687 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY052059-1|AAK93483.1| 469|Drosophila melanogaster LP08712p pro... 125 5e-29
AE014297-916|AAF54364.1| 469|Drosophila melanogaster CG8129-PB,... 125 5e-29
AE014297-917|AAF54365.1| 316|Drosophila melanogaster CG8129-PA,... 57 2e-08
AY058508-1|AAL13737.1| 522|Drosophila melanogaster LD21426p pro... 46 6e-05
AE014298-3078|AAF50863.1| 522|Drosophila melanogaster CG1753-PB... 46 6e-05
AE014298-3077|AAF50862.1| 522|Drosophila melanogaster CG1753-PA... 46 6e-05
BT004477-1|AAO42641.1| 1108|Drosophila melanogaster LP07504p pro... 32 0.85
BT003233-1|AAO24988.1| 1108|Drosophila melanogaster LP06548p pro... 32 0.85
AE014297-2975|AAF55880.4| 1108|Drosophila melanogaster CG16791-P... 32 0.85
>AY052059-1|AAK93483.1| 469|Drosophila melanogaster LP08712p
protein.
Length = 469
Score = 125 bits (302), Expect = 5e-29
Identities = 69/188 (36%), Positives = 104/188 (55%), Gaps = 1/188 (0%)
Frame = +1
Query: 121 KMVDDRIDCERPHVLSFNEIKQAVERIESGIIHTPLCEAKLSKHMDYNIYLKCENLQYTG 300
+++D + E+P +SF+++ A I G+ TP ++ S +YLK + LQYTG
Sbjct: 45 EIIDPFCNPEKPQRISFHDVTSAAFLIRGGVERTPCPKSTSSDLYGMELYLKKDFLQYTG 104
Query: 301 SCAERGMRNALVAYGEKIMDRGIIVPSQGNMALGAAYHASFFGIPVTVVLPDRTSPALAH 480
S ERG R AL++ E+ G+I S GN A YH IPVTVV+P
Sbjct: 105 SFKERGARYALLSLTEEQKRTGVISASLGNHAQALCYHGWKLNIPVTVVMPKAAPIMKIQ 164
Query: 481 RCTELGADVVLYGTSYDDALAYAKKVQRESRQILLSA-DDPLVMAGLGTVGIEIITQLPE 657
+C A V++ G +A + A ++ RE + ++ D P +MAG GT+G+EI+ Q+PE
Sbjct: 165 KCRNYKARVIVDGNDMGEAKSLAMRMSREEGLLYVNGYDHPHIMAGQGTIGLEILEQVPE 224
Query: 658 TDAVIVPV 681
DAV+VPV
Sbjct: 225 PDAVVVPV 232
>AE014297-916|AAF54364.1| 469|Drosophila melanogaster CG8129-PB,
isoform B protein.
Length = 469
Score = 125 bits (302), Expect = 5e-29
Identities = 69/188 (36%), Positives = 104/188 (55%), Gaps = 1/188 (0%)
Frame = +1
Query: 121 KMVDDRIDCERPHVLSFNEIKQAVERIESGIIHTPLCEAKLSKHMDYNIYLKCENLQYTG 300
+++D + E+P +SF+++ A I G+ TP ++ S +YLK + LQYTG
Sbjct: 45 EIIDPFCNPEKPQRISFHDVTSAAFLIRGGVERTPCPKSTSSDLYGMELYLKKDFLQYTG 104
Query: 301 SCAERGMRNALVAYGEKIMDRGIIVPSQGNMALGAAYHASFFGIPVTVVLPDRTSPALAH 480
S ERG R AL++ E+ G+I S GN A YH IPVTVV+P
Sbjct: 105 SFKERGARYALLSLTEEQKRTGVISASLGNHAQALCYHGWKLNIPVTVVMPKAAPIMKIQ 164
Query: 481 RCTELGADVVLYGTSYDDALAYAKKVQRESRQILLSA-DDPLVMAGLGTVGIEIITQLPE 657
+C A V++ G +A + A ++ RE + ++ D P +MAG GT+G+EI+ Q+PE
Sbjct: 165 KCRNYKARVIVDGNDMGEAKSLAMRMSREEGLLYVNGYDHPHIMAGQGTIGLEILEQVPE 224
Query: 658 TDAVIVPV 681
DAV+VPV
Sbjct: 225 PDAVVVPV 232
>AE014297-917|AAF54365.1| 316|Drosophila melanogaster CG8129-PA,
isoform A protein.
Length = 316
Score = 57.2 bits (132), Expect = 2e-08
Identities = 27/68 (39%), Positives = 43/68 (63%), Gaps = 1/68 (1%)
Frame = +1
Query: 481 RCTELGADVVLYGTSYDDALAYAKKVQRESRQILLSA-DDPLVMAGLGTVGIEIITQLPE 657
+C A V++ G +A + A ++ RE + ++ D P +MAG GT+G+EI+ Q+PE
Sbjct: 12 KCRNYKARVIVDGNDMGEAKSLAMRMSREEGLLYVNGYDHPHIMAGQGTIGLEILEQVPE 71
Query: 658 TDAVIVPV 681
DAV+VPV
Sbjct: 72 PDAVVVPV 79
>AY058508-1|AAL13737.1| 522|Drosophila melanogaster LD21426p
protein.
Length = 522
Score = 45.6 bits (103), Expect = 6e-05
Identities = 48/158 (30%), Positives = 77/158 (48%), Gaps = 14/158 (8%)
Frame = +1
Query: 244 SKHMDYNIYLKCENLQYTGSCAER-GMRNALVAYGEKIMDRG--IIVPSQGNMALGAAYH 414
S ++ +Y KCE L GS +R G R A + ++ G II P+ GN +G A
Sbjct: 67 SDGIECEMYAKCEFLNPGGSVKDRIGYRMVQDAEEQGLLKPGYTIIEPTSGNTGIGLAMA 126
Query: 415 ASFFGIPVTVVLPDRTSPALAHRCTELGADVVLYGT--SYD--DALAY-AKKVQRES-RQ 576
+ G +V+P++ S LGA ++ T +YD + L Y A+++QRE+
Sbjct: 127 CAVKGYKCIIVMPEKMSNEKVSALRTLGAKIIRTPTEAAYDSPEGLIYVAQQLQRETPNS 186
Query: 577 ILL----SADDPLVMAGLGTVGIEIITQLP-ETDAVIV 675
I+L +A +PL A EI+ QL + D ++V
Sbjct: 187 IVLDQYRNAGNPL--AHYDGTAAEILWQLDNKVDMIVV 222
>AE014298-3078|AAF50863.1| 522|Drosophila melanogaster CG1753-PB,
isoform B protein.
Length = 522
Score = 45.6 bits (103), Expect = 6e-05
Identities = 48/158 (30%), Positives = 77/158 (48%), Gaps = 14/158 (8%)
Frame = +1
Query: 244 SKHMDYNIYLKCENLQYTGSCAER-GMRNALVAYGEKIMDRG--IIVPSQGNMALGAAYH 414
S ++ +Y KCE L GS +R G R A + ++ G II P+ GN +G A
Sbjct: 67 SDGIECEMYAKCEFLNPGGSVKDRIGYRMVQDAEEQGLLKPGYTIIEPTSGNTGIGLAMA 126
Query: 415 ASFFGIPVTVVLPDRTSPALAHRCTELGADVVLYGT--SYD--DALAY-AKKVQRES-RQ 576
+ G +V+P++ S LGA ++ T +YD + L Y A+++QRE+
Sbjct: 127 CAVKGYKCIIVMPEKMSNEKVSALRTLGAKIIRTPTEAAYDSPEGLIYVAQQLQRETPNS 186
Query: 577 ILL----SADDPLVMAGLGTVGIEIITQLP-ETDAVIV 675
I+L +A +PL A EI+ QL + D ++V
Sbjct: 187 IVLDQYRNAGNPL--AHYDGTAAEILWQLDNKVDMIVV 222
>AE014298-3077|AAF50862.1| 522|Drosophila melanogaster CG1753-PA,
isoform A protein.
Length = 522
Score = 45.6 bits (103), Expect = 6e-05
Identities = 48/158 (30%), Positives = 77/158 (48%), Gaps = 14/158 (8%)
Frame = +1
Query: 244 SKHMDYNIYLKCENLQYTGSCAER-GMRNALVAYGEKIMDRG--IIVPSQGNMALGAAYH 414
S ++ +Y KCE L GS +R G R A + ++ G II P+ GN +G A
Sbjct: 67 SDGIECEMYAKCEFLNPGGSVKDRIGYRMVQDAEEQGLLKPGYTIIEPTSGNTGIGLAMA 126
Query: 415 ASFFGIPVTVVLPDRTSPALAHRCTELGADVVLYGT--SYD--DALAY-AKKVQRES-RQ 576
+ G +V+P++ S LGA ++ T +YD + L Y A+++QRE+
Sbjct: 127 CAVKGYKCIIVMPEKMSNEKVSALRTLGAKIIRTPTEAAYDSPEGLIYVAQQLQRETPNS 186
Query: 577 ILL----SADDPLVMAGLGTVGIEIITQLP-ETDAVIV 675
I+L +A +PL A EI+ QL + D ++V
Sbjct: 187 IVLDQYRNAGNPL--AHYDGTAAEILWQLDNKVDMIVV 222
>BT004477-1|AAO42641.1| 1108|Drosophila melanogaster LP07504p
protein.
Length = 1108
Score = 31.9 bits (69), Expect = 0.85
Identities = 15/35 (42%), Positives = 16/35 (45%)
Frame = +3
Query: 405 CLPCKFLRHPGNCCSSRSHLSCPGSSLYRIRSGCC 509
C PCK + G SRS PGS R S CC
Sbjct: 92 CYPCKHVPAAGTTTRSRSQTLSPGSGSCRDSSCCC 126
>BT003233-1|AAO24988.1| 1108|Drosophila melanogaster LP06548p
protein.
Length = 1108
Score = 31.9 bits (69), Expect = 0.85
Identities = 15/35 (42%), Positives = 16/35 (45%)
Frame = +3
Query: 405 CLPCKFLRHPGNCCSSRSHLSCPGSSLYRIRSGCC 509
C PCK + G SRS PGS R S CC
Sbjct: 92 CYPCKHVPAAGTTTRSRSQTLSPGSGSCRDSSCCC 126
>AE014297-2975|AAF55880.4| 1108|Drosophila melanogaster CG16791-PA
protein.
Length = 1108
Score = 31.9 bits (69), Expect = 0.85
Identities = 15/35 (42%), Positives = 16/35 (45%)
Frame = +3
Query: 405 CLPCKFLRHPGNCCSSRSHLSCPGSSLYRIRSGCC 509
C PCK + G SRS PGS R S CC
Sbjct: 92 CYPCKHVPAAGTTTRSRSQTLSPGSGSCRDSSCCC 126
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,282,737
Number of Sequences: 53049
Number of extensions: 734434
Number of successful extensions: 2430
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 2186
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2428
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 3013199100
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -