Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte4o23
(687 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z49068-1|CAA88854.2| 499|Caenorhabditis elegans Hypothetical pr... 125 3e-29
AC024805-6|AAK39340.1| 448|Caenorhabditis elegans Hypothetical ... 119 2e-27
Z80219-2|CAB02298.1| 317|Caenorhabditis elegans Hypothetical pr... 50 2e-06
AC024136-1|AAF35961.1| 755|Caenorhabditis elegans Hypothetical ... 37 0.012
Z72518-3|CAB63415.2| 704|Caenorhabditis elegans Hypothetical pr... 35 0.047
Z49131-7|CAA88980.3| 704|Caenorhabditis elegans Hypothetical pr... 35 0.047
Z75546-1|CAA99889.1| 546|Caenorhabditis elegans Hypothetical pr... 31 0.77
Z83233-7|CAB05764.2| 340|Caenorhabditis elegans Hypothetical pr... 30 1.3
U97004-6|AAO26010.1| 304|Caenorhabditis elegans Hypothetical pr... 30 1.3
U97004-4|AAB52276.1| 337|Caenorhabditis elegans Hypothetical pr... 30 1.3
Z83233-1|CAB05760.3| 371|Caenorhabditis elegans Hypothetical pr... 30 1.8
Z83233-10|CAB05768.2| 364|Caenorhabditis elegans Hypothetical p... 29 2.4
AF273799-1|AAG15148.1| 365|Caenorhabditis elegans nuclear recep... 29 2.4
AF273798-1|AAG15147.1| 366|Caenorhabditis elegans nuclear recep... 29 2.4
Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical pr... 29 3.1
Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical p... 29 3.1
AC006674-1|AAK68390.1| 388|Caenorhabditis elegans Nuclear hormo... 28 5.4
AL132898-3|CAC14412.1| 346|Caenorhabditis elegans Hypothetical ... 28 7.2
AF078780-4|AAC26912.1| 332|Caenorhabditis elegans Serpentine re... 28 7.2
AF047655-1|AAC04402.1| 558|Caenorhabditis elegans Hypothetical ... 27 9.5
>Z49068-1|CAA88854.2| 499|Caenorhabditis elegans Hypothetical
protein K01C8.1 protein.
Length = 499
Score = 125 bits (302), Expect = 3e-29
Identities = 71/188 (37%), Positives = 103/188 (54%), Gaps = 2/188 (1%)
Frame = +1
Query: 124 MVDDRIDCERPHVLSFNEIKQAVERIESGIIHTPLCEA-KLSKHMDYNIYLKCENLQYTG 300
+ D D E P L F++I A I++G+ TP + +LS + ++Y K E LQ TG
Sbjct: 86 LFDPDCDPENPKKLKFSDISSAAFNIKNGVQTTPCVRSLQLSSKCEMDLYFKKEYLQVTG 145
Query: 301 SCAERGMRNALVAYGEKIMDRGIIVPSQGNMALGAAYHASFFGIPVTVVLPDRTSPALAH 480
S ERG R AL E+ G+I S GN AL +YH GIPVTVV+P
Sbjct: 146 SFKERGARYALSKMAEQFKKAGVIAASAGNHALALSYHGQQMGIPVTVVMPVIAPLMKIQ 205
Query: 481 RCTELGADVVLYGTSYDDALAYAKKVQRESRQILLSADDPL-VMAGLGTVGIEIITQLPE 657
C LGA V+L G S A +A + +E+ ++ D + ++AG GT+G+EI+ Q+P+
Sbjct: 206 FCRSLGATVILKGESIAVAKDFALRHAKENHLKYINGYDAIDILAGQGTIGLEILDQVPD 265
Query: 658 TDAVIVPV 681
D ++VPV
Sbjct: 266 VDTILVPV 273
>AC024805-6|AAK39340.1| 448|Caenorhabditis elegans Hypothetical
protein Y51H7C.9 protein.
Length = 448
Score = 119 bits (286), Expect = 2e-27
Identities = 70/191 (36%), Positives = 103/191 (53%), Gaps = 2/191 (1%)
Frame = +1
Query: 115 SFKMVDDRIDCERPHVLSFNEIKQAVERIESGIIHTPLCEAK-LSKHMDYNIYLKCENLQ 291
S + D D E P +L F +I A RI++GI+ T +++ LSK D NIYLK E Q
Sbjct: 23 SVPLKDVFCDPENPKILQFGDISMAHHRIQNGIVRTDCRKSRCLSKLFDMNIYLKMEVNQ 82
Query: 292 YTGSCAERGMRNALVAYGEKIMDRGIIVPSQGNMALGAAYHASFFGIPVTVVLPDRTSPA 471
TGS ERG R AL E+ G+ S GN AL + H G+ V VV+P
Sbjct: 83 DTGSFKERGARYALQNLPEEKKKAGVYAASAGNHALALSLHGKQLGVEVNVVMPKIAPLM 142
Query: 472 LAHRCTELGADVVLYGTSYDDALAYAKKVQRESRQILLSADDPL-VMAGLGTVGIEIITQ 648
+RC +LGA++++ G ++ A ++ +S ++ D ++AG GT GIEI+ Q
Sbjct: 143 KINRCQDLGANILVQGEDIAESREIALRMAHDSNGTYINGYDHYDILAGAGTTGIEILEQ 202
Query: 649 LPETDAVIVPV 681
+ DA++VPV
Sbjct: 203 IQMPDAILVPV 213
>Z80219-2|CAB02298.1| 317|Caenorhabditis elegans Hypothetical
protein T01H8.2 protein.
Length = 317
Score = 50.0 bits (114), Expect = 2e-06
Identities = 28/83 (33%), Positives = 42/83 (50%)
Frame = +1
Query: 262 NIYLKCENLQYTGSCAERGMRNALVAYGEKIMDRGIIVPSQGNMALGAAYHASFFGIPVT 441
++ KCE+LQ TGS RG N+ + EK +G+I S GN A+ A G+P T
Sbjct: 41 HVLFKCEHLQKTGSFKARGALNSAILAKEKNA-KGMIAHSSGNHGQALAWAAQKIGLPCT 99
Query: 442 VVLPDRTSPALAHRCTELGADVV 510
+V+P + E A++V
Sbjct: 100 IVVPKNAPISKIEGMREYNANIV 122
>AC024136-1|AAF35961.1| 755|Caenorhabditis elegans Hypothetical
protein F54A3.4 protein.
Length = 755
Score = 37.1 bits (82), Expect = 0.012
Identities = 25/91 (27%), Positives = 43/91 (47%), Gaps = 8/91 (8%)
Frame = +1
Query: 262 NIYLKCENLQYTGSCAERGMRNALVAYGEKIMDRG--------IIVPSQGNMALGAAYHA 417
N+Y+KCE L GS +R + +V EK G +I P+ GN +G + A
Sbjct: 364 NVYVKCEFLNAGGSTKDR-IAKKMVEIAEKTGKPGALTPGATTLIEPTSGNTGIGLSLVA 422
Query: 418 SFFGIPVTVVLPDRTSPALAHRCTELGADVV 510
+ G + +P++ S + + LG+ +V
Sbjct: 423 AVRGYKCLITMPEKMSKEKSTTLSVLGSTIV 453
>Z72518-3|CAB63415.2| 704|Caenorhabditis elegans Hypothetical
protein ZC373.1 protein.
Length = 704
Score = 35.1 bits (77), Expect = 0.047
Identities = 22/90 (24%), Positives = 41/90 (45%), Gaps = 7/90 (7%)
Frame = +1
Query: 262 NIYLKCENLQYTGSCAERGMRNALVAYGEKIMDRG-------IIVPSQGNMALGAAYHAS 420
N+Y+KCE + GS +R + +V EK G +I P+ GN +G + ++
Sbjct: 406 NVYVKCEYMNAGGSTKDR-IAKRMVEIAEKTGKPGKLVPGVTLIEPTSGNTGIGLSLASA 464
Query: 421 FFGIPVTVVLPDRTSPALAHRCTELGADVV 510
G + +P + S + LG+ ++
Sbjct: 465 VRGYKCIITMPKKMSKEKSIAMASLGSTII 494
>Z49131-7|CAA88980.3| 704|Caenorhabditis elegans Hypothetical
protein ZC373.1 protein.
Length = 704
Score = 35.1 bits (77), Expect = 0.047
Identities = 22/90 (24%), Positives = 41/90 (45%), Gaps = 7/90 (7%)
Frame = +1
Query: 262 NIYLKCENLQYTGSCAERGMRNALVAYGEKIMDRG-------IIVPSQGNMALGAAYHAS 420
N+Y+KCE + GS +R + +V EK G +I P+ GN +G + ++
Sbjct: 406 NVYVKCEYMNAGGSTKDR-IAKRMVEIAEKTGKPGKLVPGVTLIEPTSGNTGIGLSLASA 464
Query: 421 FFGIPVTVVLPDRTSPALAHRCTELGADVV 510
G + +P + S + LG+ ++
Sbjct: 465 VRGYKCIITMPKKMSKEKSIAMASLGSTII 494
>Z75546-1|CAA99889.1| 546|Caenorhabditis elegans Hypothetical
protein R05D11.1 protein.
Length = 546
Score = 31.1 bits (67), Expect = 0.77
Identities = 16/42 (38%), Positives = 20/42 (47%), Gaps = 2/42 (4%)
Frame = -3
Query: 364 LCPLFFHRTPQERYAYRVQHNCQCTEGF--HILNICCNPYVY 245
+C L R P RY +V+ C F H N+C NPY Y
Sbjct: 87 MCVLRAFRFPVIRYESQVKSILTCRHAFNSHSRNVCLNPYHY 128
>Z83233-7|CAB05764.2| 340|Caenorhabditis elegans Hypothetical
protein K06B4.7 protein.
Length = 340
Score = 30.3 bits (65), Expect = 1.3
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = -3
Query: 367 FLCPLFFHRTPQERYAYRVQHNCQCTEGFHILNIC 263
F C +FFHRT + +R + CT F I C
Sbjct: 21 FACKMFFHRTVYKNLLFRCKRIQNCTIHFKIFPKC 55
>U97004-6|AAO26010.1| 304|Caenorhabditis elegans Hypothetical
protein R08E5.2c protein.
Length = 304
Score = 30.3 bits (65), Expect = 1.3
Identities = 28/105 (26%), Positives = 50/105 (47%), Gaps = 6/105 (5%)
Frame = +1
Query: 217 HTPLCEAK-LSKHMDYNIYLKCENLQYTGSCAERGMRNALVAYGEK----IMDRGIIVP- 378
+TPL + +SK +D I +K E L + S +R + ++V EK + + ++V
Sbjct: 16 NTPLVLLRNISKGLDARIAVKVEYLNPSCSVKDR-IAKSMVDEAEKAGTIVPGKTVLVEG 74
Query: 379 SQGNMALGAAYHASFFGIPVTVVLPDRTSPALAHRCTELGADVVL 513
+ GN+ + A+ G V +V+P S GA+V+L
Sbjct: 75 TSGNLGIALAHIGKIRGYKVILVMPATMSVERRAMLRAYGAEVIL 119
>U97004-4|AAB52276.1| 337|Caenorhabditis elegans Hypothetical
protein R08E5.2a protein.
Length = 337
Score = 30.3 bits (65), Expect = 1.3
Identities = 28/105 (26%), Positives = 50/105 (47%), Gaps = 6/105 (5%)
Frame = +1
Query: 217 HTPLCEAK-LSKHMDYNIYLKCENLQYTGSCAERGMRNALVAYGEK----IMDRGIIVP- 378
+TPL + +SK +D I +K E L + S +R + ++V EK + + ++V
Sbjct: 16 NTPLVLLRNISKGLDARIAVKVEYLNPSCSVKDR-IAKSMVDEAEKAGTIVPGKTVLVEG 74
Query: 379 SQGNMALGAAYHASFFGIPVTVVLPDRTSPALAHRCTELGADVVL 513
+ GN+ + A+ G V +V+P S GA+V+L
Sbjct: 75 TSGNLGIALAHIGKIRGYKVILVMPATMSVERRAMLRAYGAEVIL 119
>Z83233-1|CAB05760.3| 371|Caenorhabditis elegans Hypothetical
protein K06B4.1 protein.
Length = 371
Score = 29.9 bits (64), Expect = 1.8
Identities = 15/35 (42%), Positives = 17/35 (48%)
Frame = -3
Query: 367 FLCPLFFHRTPQERYAYRVQHNCQCTEGFHILNIC 263
F C +FFHR E Y Q +C E F IL C
Sbjct: 23 FACKMFFHRMVVENLHYCCQKFNKCYEKFIILPKC 57
>Z83233-10|CAB05768.2| 364|Caenorhabditis elegans Hypothetical
protein K06B4.11 protein.
Length = 364
Score = 29.5 bits (63), Expect = 2.4
Identities = 16/39 (41%), Positives = 24/39 (61%)
Frame = +1
Query: 121 KMVDDRIDCERPHVLSFNEIKQAVERIESGIIHTPLCEA 237
K V +R + + P +SFNE+ Q V + E +I+ LCEA
Sbjct: 130 KKVHNRQENQLPRAISFNEL-QVVYQNEMTVIYQFLCEA 167
>AF273799-1|AAG15148.1| 365|Caenorhabditis elegans nuclear receptor
NHR-53 protein.
Length = 365
Score = 29.5 bits (63), Expect = 2.4
Identities = 16/39 (41%), Positives = 24/39 (61%)
Frame = +1
Query: 121 KMVDDRIDCERPHVLSFNEIKQAVERIESGIIHTPLCEA 237
K V +R + + P +SFNE+ Q V + E +I+ LCEA
Sbjct: 131 KKVHNRQENQLPRAISFNEL-QVVYQNEMTVIYQFLCEA 168
>AF273798-1|AAG15147.1| 366|Caenorhabditis elegans nuclear receptor
NHR-53 protein.
Length = 366
Score = 29.5 bits (63), Expect = 2.4
Identities = 16/39 (41%), Positives = 24/39 (61%)
Frame = +1
Query: 121 KMVDDRIDCERPHVLSFNEIKQAVERIESGIIHTPLCEA 237
K V +R + + P +SFNE+ Q V + E +I+ LCEA
Sbjct: 132 KKVHNRQENQLPRAISFNEL-QVVYQNEMTVIYQFLCEA 169
>Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 29.1 bits (62), Expect = 3.1
Identities = 16/39 (41%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
Frame = -2
Query: 683 ATGTITASVSGNCVMISMPTVPNPAITKGSSAL--NRIC 573
++ TIT+S S + S+PT P IT S+L N IC
Sbjct: 344 SSSTITSSPSSTTLSTSIPTTTTPEITSTLSSLPDNAIC 382
>Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 29.1 bits (62), Expect = 3.1
Identities = 16/39 (41%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
Frame = -2
Query: 683 ATGTITASVSGNCVMISMPTVPNPAITKGSSAL--NRIC 573
++ TIT+S S + S+PT P IT S+L N IC
Sbjct: 344 SSSTITSSPSSTTLSTSIPTTTTPEITSTLSSLPDNAIC 382
>AC006674-1|AAK68390.1| 388|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 119 protein.
Length = 388
Score = 28.3 bits (60), Expect = 5.4
Identities = 14/39 (35%), Positives = 17/39 (43%)
Frame = -3
Query: 379 MVLLFLCPLFFHRTPQERYAYRVQHNCQCTEGFHILNIC 263
+V F C FF RT + Y +HN C H N C
Sbjct: 38 VVTCFGCKGFFRRTLKRPSEYTCRHNGHCVVDRHERNSC 76
>AL132898-3|CAC14412.1| 346|Caenorhabditis elegans Hypothetical
protein Y59A8B.4 protein.
Length = 346
Score = 27.9 bits (59), Expect = 7.2
Identities = 15/52 (28%), Positives = 25/52 (48%)
Frame = -1
Query: 363 SVHYFFTVRHKSVTHTAFSTTASVLKVFTF*IYVVIHMFTEFCFT*RSVYYP 208
S+ FF R+ ++ S+ K +Y+V+H FCFT ++YP
Sbjct: 111 SILGFFESRYNAIVKR---NRGSIFKTKGRLLYIVLHYTYAFCFTLPLLFYP 159
>AF078780-4|AAC26912.1| 332|Caenorhabditis elegans Serpentine
receptor, class h protein229 protein.
Length = 332
Score = 27.9 bits (59), Expect = 7.2
Identities = 10/31 (32%), Positives = 17/31 (54%)
Frame = -3
Query: 382 VMVLLFLCPLFFHRTPQERYAYRVQHNCQCT 290
+ +L++CP+F + QER +V CT
Sbjct: 143 ISAVLYVCPIFLNAPDQERAVGKVSEILNCT 173
>AF047655-1|AAC04402.1| 558|Caenorhabditis elegans Hypothetical
protein C17B7.8 protein.
Length = 558
Score = 27.5 bits (58), Expect = 9.5
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = -2
Query: 401 PNAMFPCDGTIIPLSIIFSPY 339
PN FP +GT I L I SPY
Sbjct: 53 PNISFPNNGTYITLDQILSPY 73
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,715,190
Number of Sequences: 27780
Number of extensions: 379808
Number of successful extensions: 1108
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1039
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1104
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1571291122
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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