Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte4o16
(733 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_03_0812 - 19922208-19922357,19922448-19922564,19922681-199227... 100 2e-21
05_06_0014 + 24854462-24854570,24854958-24855065,24855240-248554... 90 2e-18
07_01_0971 + 8169197-8169311,8170351-8170458,8170533-8170725,817... 80 2e-15
01_06_1654 - 38924090-38924101,38924183-38924215,38924737-389248... 80 2e-15
03_06_0563 - 34738732-34738890,34738965-34739009,34739154-347392... 71 7e-13
11_01_0636 - 5095754-5095974,5097188-5097254,5097467-5098363 34 0.10
03_01_0183 - 1474202-1474276,1474511-1474627,1474791-1474847,147... 33 0.18
01_06_0481 - 29646245-29646371,29646474-29646556,29646672-296467... 32 0.54
11_06_0434 - 23512921-23513529 31 0.71
08_02_1137 + 24623967-24623991,24625815-24625831,24626100-246262... 30 2.2
02_04_0532 + 23711530-23711755,23712984-23713093,23713204-237152... 29 2.9
02_02_0348 - 9233032-9233154,9233233-9233311,9233387-9233511,923... 29 2.9
11_01_0315 - 2347254-2347345,2347485-2347895,2348182-2349633,234... 29 3.8
03_02_0900 - 12262149-12262565,12262924-12263061,12263387-122634... 29 3.8
04_03_0937 + 20923705-20923833,20924001-20924012,20924413-209244... 29 5.0
04_03_0387 - 15251816-15251905,15251999-15252069,15252098-152523... 29 5.0
03_05_0109 - 20903013-20903062,20903406-20903538,20903631-209037... 29 5.0
08_02_0456 - 17362080-17364156,17364853-17364942,17372615-173733... 28 8.8
>04_03_0812 -
19922208-19922357,19922448-19922564,19922681-19922752,
19922864-19923993,19924939-19925008,19925125-19925199
Length = 537
Score = 99.5 bits (237), Expect = 2e-21
Identities = 53/147 (36%), Positives = 89/147 (60%)
Frame = +2
Query: 293 ELNSDNVYLSEHFDDENAFKRKWIKSEAKKQGVDENIAKYDGKWEIQQPIRKILKNDFGL 472
++ + + E FD+ +F+ +W+ S G D+ Y G W+ ++ D+GL
Sbjct: 19 QIRASDPLFYEPFDE--SFEGRWVLS-----GKDD----YKGVWKHEKSDGH---EDYGL 64
Query: 473 VLTTEAKHAAISTLLDKPFEFKNKPLIVQYEVTMQEGQNCGGAYIKLLSKGTNTKADLRK 652
+++ +AK AI LD+P K+ +++Q+EV +Q G CGGAY+K + + + D ++
Sbjct: 65 LVSEKAKKYAIIKELDEPVTLKDGTVVLQFEVRLQNGLECGGAYLKYI-RPQDAAWDAKE 123
Query: 653 FHDQTPYTIMFGPDKCGNDNKLHFIFR 733
F ++TPYTIMFGPDKCG+ NK+HFI +
Sbjct: 124 FDNETPYTIMFGPDKCGSTNKVHFILK 150
>05_06_0014 +
24854462-24854570,24854958-24855065,24855240-24855432,
24855892-24856150,24856236-24856292,24856370-24856417,
24856725-24856811,24856885-24856942,24857084-24857151,
24857279-24857374,24857483-24857539,24857906-24857952,
24858184-24858210,24858312-24858504
Length = 468
Score = 89.8 bits (213), Expect = 2e-18
Identities = 56/143 (39%), Positives = 76/143 (53%), Gaps = 1/143 (0%)
Frame = +2
Query: 302 SDNVYLSEHFDDENAFKRKWIKSEAKKQGVDENIAKYDGKWEIQQPIRKILKNDFGLVLT 481
S V E FDD+ + +W+KS+ KK K+ P +D G+ T
Sbjct: 26 SGEVIFEERFDDD--WGSRWVKSDWKKSEGKAGTFKHTAGSYSGDP------DDRGIQTT 77
Query: 482 TEAKHAAISTLLDKPFEFKNKPLIVQYEVTMQEGQNCGGAYIKLLSKGTNTKADLRKFHD 661
++AKH AIS + F KN+ L+VQY + +++ CGGAYIKL+S N K KF
Sbjct: 78 SDAKHFAISAKFPE-FSNKNRTLVVQYSIKIEQDIECGGAYIKLMSGYVNQK----KFGG 132
Query: 662 QTPYTIMFGPDKCGND-NKLHFI 727
TPY+ MFGPD CG+ KLH I
Sbjct: 133 DTPYSFMFGPDICGDQTKKLHLI 155
>07_01_0971 +
8169197-8169311,8170351-8170458,8170533-8170725,
8170811-8171069,8171151-8171207,8171433-8171480,
8171571-8171657,8171743-8171800,8171891-8171958,
8172066-8172161,8172244-8172291,8172658-8172696,
8172782-8172868,8173136-8173147
Length = 424
Score = 80.2 bits (189), Expect = 2e-15
Identities = 52/141 (36%), Positives = 77/141 (54%), Gaps = 1/141 (0%)
Frame = +2
Query: 311 VYLSEHFDDENAFKRKWIKSEAKKQGVDENIAKYDGKWEIQQPIRKILKNDFGLVLTTEA 490
V+ E F+D ++ +W+KSE KK DEN+A G+W D G+ + +
Sbjct: 31 VFFQEKFED--GWESRWVKSEWKK---DENMA---GEWNHTSGKWNGDPEDKGIQTSEDY 82
Query: 491 KHAAISTLLDKPFEFKNKPLIVQYEVTMQEGQNCGGAYIKLLSKGTNTKADLRKFHDQTP 670
+ AIS + F K+K L++Q+ V ++ +CGG Y+KLL D +KF TP
Sbjct: 83 RFYAISAEYPE-FSNKDKTLVLQFSVKHEQKLDCGGGYVKLLGGDV----DQKKFGGDTP 137
Query: 671 YTIMFGPDKCG-NDNKLHFIF 730
Y+IMFGPD CG + K+H IF
Sbjct: 138 YSIMFGPDICGYSTKKVHTIF 158
>01_06_1654 -
38924090-38924101,38924183-38924215,38924737-38924829,
38924909-38924965,38925048-38925143,38925237-38925304,
38925429-38925486,38925572-38925658,38925935-38925982,
38926060-38926116,38926200-38926458,38926666-38926858,
38926991-38927098,38927849-38927957
Length = 425
Score = 80.2 bits (189), Expect = 2e-15
Identities = 49/140 (35%), Positives = 72/140 (51%), Gaps = 1/140 (0%)
Frame = +2
Query: 311 VYLSEHFDDENAFKRKWIKSEAKKQGVDENIAKYDGKWEIQQPIRKILKNDFGLVLTTEA 490
V E F+D ++ +W+KS+ K+ K+ P +D G+ T +A
Sbjct: 29 VIFEERFED--GWESRWVKSDWKRSEGKAGTFKHTAGRYSGDP------DDKGIQTTLDA 80
Query: 491 KHAAISTLLDKPFEFKNKPLIVQYEVTMQEGQNCGGAYIKLLSKGTNTKADLRKFHDQTP 670
+H AIS + + F K + L++QY + ++ CGG YIKL+S N K KF TP
Sbjct: 81 RHFAISAKIPE-FSNKGRTLVLQYSIKFEQDIECGGGYIKLMSGYVNQK----KFSGDTP 135
Query: 671 YTIMFGPDKCGND-NKLHFI 727
Y++MFGPD CG KLH I
Sbjct: 136 YSLMFGPDICGTQTKKLHLI 155
>03_06_0563 -
34738732-34738890,34738965-34739009,34739154-34739201,
34739291-34739386,34739467-34739534,34739633-34739690,
34739783-34739869,34740004-34740051,34740360-34740416,
34740525-34740783,34740877-34741102,34741168-34741275,
34741885-34741987
Length = 453
Score = 71.3 bits (167), Expect = 7e-13
Identities = 49/147 (33%), Positives = 77/147 (52%), Gaps = 8/147 (5%)
Frame = +2
Query: 311 VYLSEHFDDENAFKRKWIKSEAKKQGVDENIAKYD---GKWEIQQPIRKILKNDF----G 469
V+ E FDD ++ +W+KSE KK D +++ GKW + + + G
Sbjct: 27 VFFQEKFDD--GWEDRWVKSEWKKD--DNRAGEWNHTSGKWYGDADDKGMCEVTLLLCAG 82
Query: 470 LVLTTEAKHAAISTLLDKPFEFKNKPLIVQYEVTMQEGQNCGGAYIKLLSKGTNTKADLR 649
+ + + + AIS + F K+K L++Q+ V ++ +CGG Y+KLL D +
Sbjct: 83 IQTSEDYRFYAISAKYPE-FSSKDKTLVLQFSVKHEQKLDCGGGYVKLLGGDV----DQK 137
Query: 650 KFHDQTPYTIMFGPDKCG-NDNKLHFI 727
KF +TPY+IMFGPD CG K+H I
Sbjct: 138 KFGGETPYSIMFGPDICGYATKKVHAI 164
>11_01_0636 - 5095754-5095974,5097188-5097254,5097467-5098363
Length = 394
Score = 34.3 bits (75), Expect = 0.10
Identities = 19/68 (27%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
Frame = +2
Query: 200 FGNTRLTNANEVDQNDEATVEIEEDDQYVSP-ELNSDNVYLSEHFDDENAFKRKWIKSEA 376
F + +E DQ++E E E++D Y +P E +++ Y EH D++N + + E
Sbjct: 325 FEEIEILEEDENDQDEEEEDEDEDEDSYENPFEDENEDSYKGEHEDEDNEDEDEDDDDED 384
Query: 377 KKQGVDEN 400
+ + DE+
Sbjct: 385 EDEDEDED 392
>03_01_0183 -
1474202-1474276,1474511-1474627,1474791-1474847,
1475149-1475196,1475313-1476101,1476516-1476646,
1476769-1476937,1477954-1478541
Length = 657
Score = 33.5 bits (73), Expect = 0.18
Identities = 20/68 (29%), Positives = 38/68 (55%)
Frame = +2
Query: 182 SILLAFFGNTRLTNANEVDQNDEATVEIEEDDQYVSPELNSDNVYLSEHFDDENAFKRKW 361
+IL +FF + + ++ D+++E + EDDQ + +++S V+ SE DE+ K ++
Sbjct: 326 TILQSFFFDGAVPSSAISDEDEEISEAGNEDDQ-LEEKVSSSQVFYSEQQTDESQLKMEY 384
Query: 362 IKSEAKKQ 385
K A Q
Sbjct: 385 EKRRAISQ 392
>01_06_0481 - 29646245-29646371,29646474-29646556,29646672-29646752,
29646843-29646899,29647007-29647094,29647304-29647374,
29647457-29647585,29647662-29648051,29648332-29648517,
29648612-29648692,29648787-29648879,29648966-29649086,
29649200-29649409,29649560-29649727,29649898-29650065,
29650144-29650311,29650453-29650620,29650738-29650905,
29651023-29651190,29651567-29651734,29652391-29652558,
29652645-29652812,29655720-29655887,29656069-29656236,
29656391-29656558,29656670-29656837,29657525-29657664,
29658033-29658221,29658243-29658315,29658379-29658452,
29658535-29658654,29658718-29658738,29658794-29658999,
29659094-29659271,29660066-29660126,29660232-29660341,
29660427-29660558,29661091-29661258,29661339-29661465,
29661794-29661831,29663321-29663422,29663505-29663562,
29663659-29663760,29663844-29663990,29664098-29664234,
29664313-29664462,29664561-29664720,29665820-29665878,
29666025-29666181,29666288-29666433,29666523-29666666,
29667242-29667376
Length = 2344
Score = 31.9 bits (69), Expect = 0.54
Identities = 37/150 (24%), Positives = 75/150 (50%), Gaps = 15/150 (10%)
Frame = +2
Query: 209 TRLTNANEVDQNDEATVEIEEDDQYVSP--------ELNS---DNVYLSEHFDDENAFKR 355
TR+T +++N+E +I +DD+++ E N+ +N+ L E + +A +
Sbjct: 1571 TRMTLTEALEKNEELLKKIHDDDKHILELQFTIQRLEENTAAKENLLLRER-EQNDATTK 1629
Query: 356 KWIKSEAKKQGVDENIAKYDGKWE-IQQPIRKILKNDF---GLVLTTEAKHAAISTLLDK 523
I+S+ + + + + D K + +Q I +I +N L+L+ + AI L +
Sbjct: 1630 AQIESQERNEQLLKRFVDVDRKIDLLQDTIERIGENSTIKDALLLSERQEKDAIKKELVE 1689
Query: 524 PFEFKNKPLIVQYEVTMQEGQNCGGAYIKL 613
E +N+ LI++ E T ++ ++ A IKL
Sbjct: 1690 AGE-RNEELIMKIEDTDKKIEHLQNAIIKL 1718
>11_06_0434 - 23512921-23513529
Length = 202
Score = 31.5 bits (68), Expect = 0.71
Identities = 17/42 (40%), Positives = 23/42 (54%)
Frame = +2
Query: 215 LTNANEVDQNDEATVEIEEDDQYVSPELNSDNVYLSEHFDDE 340
L +E D +D+ E EEDD++ E +SDN E DDE
Sbjct: 137 LMTDDEEDDDDDDEDESEEDDEFDEKEDDSDNEDDEESSDDE 178
>08_02_1137 +
24623967-24623991,24625815-24625831,24626100-24626216,
24626399-24626440,24627246-24629705
Length = 886
Score = 29.9 bits (64), Expect = 2.2
Identities = 24/89 (26%), Positives = 40/89 (44%), Gaps = 3/89 (3%)
Frame = +2
Query: 296 LNSDNVYLSEHFDDENAFKRKWIKSEAKKQGVDENI---AKYDGKWEIQQPIRKILKNDF 466
L S +VY+ H + KW+KSE + QG+ + AKY + R I F
Sbjct: 68 LRSCDVYIGYHGNGSLGRFCKWLKSELELQGIASFVADRAKYSDTQSHEIADRIICSVAF 127
Query: 467 GLVLTTEAKHAAISTLLDKPFEFKNKPLI 553
G+++ T + +L + F + K L+
Sbjct: 128 GVIVVTMSSFLNPFSLEEIRFFAQKKNLV 156
>02_04_0532 +
23711530-23711755,23712984-23713093,23713204-23715298,
23716092-23716153,23716236-23716277,23716614-23716673,
23716873-23717010,23717333-23717374,23717452-23717574
Length = 965
Score = 29.5 bits (63), Expect = 2.9
Identities = 15/50 (30%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Frame = +2
Query: 254 TVEIEED-DQYVSPELNSDNVYLSEHFDDENAFKRKWIKSEAKKQGVDEN 400
T IE++ +++ P++ SD L D F+RKW++ + K +G ++N
Sbjct: 450 TWHIEQNMARHLRPDMLSDFRTLVHAPYDHEEFERKWVEFKVKHKGCEDN 499
>02_02_0348 -
9233032-9233154,9233233-9233311,9233387-9233511,
9233597-9233734,9233802-9233993,9235269-9237209
Length = 865
Score = 29.5 bits (63), Expect = 2.9
Identities = 15/50 (30%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Frame = +2
Query: 254 TVEIEED-DQYVSPELNSDNVYLSEHFDDENAFKRKWIKSEAKKQGVDEN 400
T IE++ +++ P++ SD L D F+RKW++ + K +G ++N
Sbjct: 315 TWHIEQNMARHLRPDMLSDFRALVHAPYDHEEFERKWVEFKVKHKGCEDN 364
>11_01_0315 - 2347254-2347345,2347485-2347895,2348182-2349633,
2349688-2350045,2350818-2351177,2351321-2351419,
2351856-2351948,2352078-2352215,2352389-2352476,
2352682-2352770,2353113-2353178,2353370-2353481,
2354702-2354901
Length = 1185
Score = 29.1 bits (62), Expect = 3.8
Identities = 14/39 (35%), Positives = 23/39 (58%)
Frame = +2
Query: 284 VSPELNSDNVYLSEHFDDENAFKRKWIKSEAKKQGVDEN 400
+SP + SD L DE+ F+RKW++ + K + D+N
Sbjct: 903 LSPAMLSDFRTLVHSEFDEDEFERKWVEFKIKHKVSDDN 941
>03_02_0900 -
12262149-12262565,12262924-12263061,12263387-12263446,
12263557-12263619,12264181-12264243,12264420-12264482,
12265076-12265153,12265673-12266080
Length = 429
Score = 29.1 bits (62), Expect = 3.8
Identities = 30/131 (22%), Positives = 57/131 (43%), Gaps = 13/131 (9%)
Frame = +2
Query: 86 ISDSNRLINKRVFVLYQAQTKMAEISRKLF-----LFSILLAFFGNTRLTNA------NE 232
+ ++N+++ +V VL +A E S++L L S L F + LT A NE
Sbjct: 235 LEETNKVLLVQVKVLEEASNNTVEESQRLVKGFDELASRLGVFEAKSALTEASVTKKGNE 294
Query: 233 --VDQNDEATVEIEEDDQYVSPELNSDNVYLSEHFDDENAFKRKWIKSEAKKQGVDENIA 406
VD++ ++ I D Y + N Y+S H ++ + ++ +G+ + A
Sbjct: 295 LIVDRSVNSSAAITSVDNYSPINSSPSNAYVSNHLEEAPMQLPETTINDVSSEGLIDMNA 354
Query: 407 KYDGKWEIQQP 439
K + +P
Sbjct: 355 HQRSKQDFDEP 365
>04_03_0937 +
20923705-20923833,20924001-20924012,20924413-20924473,
20924523-20924749,20924859-20925104,20925645-20925657,
20927681-20928302,20928320-20928949,20928960-20929224
Length = 734
Score = 28.7 bits (61), Expect = 5.0
Identities = 17/59 (28%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Frame = +2
Query: 242 NDEATVEIEEDDQYVSPELNSDNVYLSEHFDDE-NAFKRKWIKSEAKKQGVDENIAKYD 415
+D+ T E++++D V E ++ ++ + E N KR+ + EAKK+ +E K D
Sbjct: 109 DDDETTEVQDEDNAVEHENQGSHITITSRANGEKNMRKRQSEEEEAKKR--EEEAKKRD 165
>04_03_0387 -
15251816-15251905,15251999-15252069,15252098-15252323,
15252344-15252496,15252570-15252656,15252745-15252948,
15253038-15253159,15253354-15253507,15254329-15254434,
15254507-15254617,15256468-15256622
Length = 492
Score = 28.7 bits (61), Expect = 5.0
Identities = 16/62 (25%), Positives = 33/62 (53%), Gaps = 4/62 (6%)
Frame = +2
Query: 212 RLTNANEVDQNDEAT----VEIEEDDQYVSPELNSDNVYLSEHFDDENAFKRKWIKSEAK 379
RLT+A + D +T + +D ++ + L + Y+ H D+ F+R++++ E +
Sbjct: 38 RLTDAQLALRQDASTFGETIGSAQDVKFDAKTLTQAHRYVLRHLDEIEDFRREFLEEEKR 97
Query: 380 KQ 385
KQ
Sbjct: 98 KQ 99
>03_05_0109 -
20903013-20903062,20903406-20903538,20903631-20903726,
20904011-20904168,20904278-20904392,20904486-20904539,
20904818-20904925,20905406-20905495,20905907-20906086,
20906204-20906516,20906619-20906794
Length = 490
Score = 28.7 bits (61), Expect = 5.0
Identities = 17/62 (27%), Positives = 30/62 (48%)
Frame = +2
Query: 341 NAFKRKWIKSEAKKQGVDENIAKYDGKWEIQQPIRKILKNDFGLVLTTEAKHAAISTLLD 520
N+ K+K ++ K+ + N + K E + RKI K+DF LV + +S ++
Sbjct: 190 NSLKQKLVEYNKKQLALRANATAINDKKE--ETHRKIAKSDFELVKLAQENSKLLSKIVQ 247
Query: 521 KP 526
P
Sbjct: 248 SP 249
>08_02_0456 -
17362080-17364156,17364853-17364942,17372615-17373318,
17373421-17373451,17374366-17374448,17374517-17374640,
17376427-17376560
Length = 1080
Score = 27.9 bits (59), Expect = 8.8
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = +2
Query: 59 KIYAVDFIHISDSNRLINKRVFVLYQAQTKMAEI 160
++Y + +H DS RL KR+F L + + + E+
Sbjct: 439 RVYKLRPLHFVDSKRLFLKRIFGLEECPSHLTEV 472
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,023,259
Number of Sequences: 37544
Number of extensions: 327369
Number of successful extensions: 891
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 841
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 882
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1921741964
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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