Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte4o16
         (733 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF457551-1|AAL68781.1|  406|Anopheles gambiae calreticulin protein.    71   4e-14
U50475-1|AAA93477.1|  207|Anopheles gambiae protein ( Anopheles ...    23   9.7  
AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcript...    23   9.7  

>AF457551-1|AAL68781.1|  406|Anopheles gambiae calreticulin protein.
          Length = 406

 Score = 70.9 bits (166), Expect = 4e-14
 Identities = 45/141 (31%), Positives = 72/141 (51%), Gaps = 1/141 (0%)
 Frame = +2

Query: 311 VYLSEHFDDENAFKRKWIKSEAKKQGVDENIAKYDGKWEIQQPIRKILKNDFGLVLTTEA 490
           VY  E F D++ +++ W++SE K  GV+     Y              + D GL  + +A
Sbjct: 18  VYFEEGFKDDS-WQKTWVQSEHK--GVE-----YGKFVHTAGKFYNDAEADKGLQTSQDA 69

Query: 491 KHAAISTLLDKPFEFKNKPLIVQYEVTMQEGQNCGGAYIKLLSKGTNTKADLRKFHDQTP 670
           +  A+S     PF  K+  L++Q+ V  ++  +CGG Y+K+     +   D +  H +TP
Sbjct: 70  RFYALSNKFT-PFSNKDDTLVIQFSVKHEQNIDCGGGYLKVF----DCSVDQKDLHGETP 124

Query: 671 YTIMFGPDKCG-NDNKLHFIF 730
           Y +MFGPD CG    K+H IF
Sbjct: 125 YLVMFGPDICGPGTKKVHVIF 145


>U50475-1|AAA93477.1|  207|Anopheles gambiae protein ( Anopheles
           gambiae putativearylphorin precursor, mRNA, partial cds.
           ).
          Length = 207

 Score = 23.0 bits (47), Expect = 9.7
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = +2

Query: 197 FFGNTRLTNANEVDQNDEATVEI 265
           FFGN   +N + VD+N    +E+
Sbjct: 32  FFGNLLNSNVDSVDRNYVGYIEV 54


>AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1049

 Score = 23.0 bits (47), Expect = 9.7
 Identities = 12/45 (26%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
 Frame = +2

Query: 554  VQYEVT-MQEGQNCGGAYIKLLSKGTNTKADLRKFHDQTPYTIMF 685
            V Y VT +  G  C  +Y+   ++ ++++    K  D+T   +MF
Sbjct: 942  VDYFVTQVLSGHGCFRSYLHRFNRASSSRCPACKDEDETVDHVMF 986


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 713,837
Number of Sequences: 2352
Number of extensions: 15038
Number of successful extensions: 19
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 74844540
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)