Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte4o14
         (717 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_04_0226 + 23754513-23756914,23756972-23757050,23759296-23760153     30   1.6  
12_01_0296 + 2240376-2240580,2241556-2241764,2241847-2241975,224...    29   4.9  
03_02_0022 - 5054548-5054663,5054899-5055103,5055194-5055261,505...    28   6.4  
05_01_0512 - 4259162-4259849,4260209-4260432,4260854-4261071,426...    28   8.5  

>04_04_0226 + 23754513-23756914,23756972-23757050,23759296-23760153
          Length = 1112

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 16/36 (44%), Positives = 19/36 (52%)
 Frame = -3

Query: 520 KWWVMKKHQISSLKLLIRSRFLDCH*EKSFLLFHFY 413
           KW   KKH I    LL+ S FL C    SF++F  Y
Sbjct: 441 KWKKQKKHWILGSSLLLGSFFLMCILLASFIIFQNY 476


>12_01_0296 +
           2240376-2240580,2241556-2241764,2241847-2241975,
           2242271-2242417,2243045-2243108,2243208-2243311,
           2243373-2243411
          Length = 298

 Score = 28.7 bits (61), Expect = 4.9
 Identities = 12/42 (28%), Positives = 25/42 (59%)
 Frame = +1

Query: 361 HIAESSLENEFSTNEMFNKNEIKENSSLNDNQEILILSEASM 486
           H+ +SS E+  S ++MF+ NE+  +   ++N  I   S+ ++
Sbjct: 117 HMTQSSSESVQSPSDMFSNNEMNSSFETDENHSIKSSSDRTL 158


>03_02_0022 -
           5054548-5054663,5054899-5055103,5055194-5055261,
           5055573-5055861,5056687-5056753,5057928-5057974
          Length = 263

 Score = 28.3 bits (60), Expect = 6.4
 Identities = 14/35 (40%), Positives = 21/35 (60%)
 Frame = +3

Query: 195 LWFLNYGKIFVTRLTKDLIISLASYVYSGQLLPKH 299
           LWF+ +  I +  L  DLI S+  Y+ S  L+PK+
Sbjct: 53  LWFIVHLAISLCSLWFDLIYSIECYLISFGLIPKY 87


>05_01_0512 -
           4259162-4259849,4260209-4260432,4260854-4261071,
           4261154-4261234,4261342-4262299
          Length = 722

 Score = 27.9 bits (59), Expect = 8.5
 Identities = 15/42 (35%), Positives = 25/42 (59%)
 Frame = +1

Query: 436 SSLNDNQEILILSEASMSLSGVFSSPTISQASQKSPTQAADS 561
           ++L    E  I +E+S+S+S    SP+ S  +  SP+QA +S
Sbjct: 50  TALRRYAESEISTESSLSISEADKSPSHSSMASPSPSQALES 91


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,568,310
Number of Sequences: 37544
Number of extensions: 271624
Number of successful extensions: 656
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 642
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 656
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1862792824
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)