Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte4o14
         (717 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U70851-2|AAM97996.1|  671|Caenorhabditis elegans Osmotic avoidan...    32   0.36 
U70851-1|AAM97997.1|  699|Caenorhabditis elegans Osmotic avoidan...    32   0.36 
AF149285-1|AAF99084.1|  672|Caenorhabditis elegans Osm-3 protein.      32   0.36 
Z70311-6|CAA94379.3|  442|Caenorhabditis elegans Hypothetical pr...    31   1.1  
Z73423-1|CAA97776.2|  492|Caenorhabditis elegans Hypothetical pr...    30   1.9  
AL132949-38|CAB61092.3| 1099|Caenorhabditis elegans Hypothetical...    29   3.3  
AF480439-1|AAM76083.1| 1037|Caenorhabditis elegans dicer-related...    29   3.3  
AF036696-4|AAB88350.1| 1037|Caenorhabditis elegans Dicer related...    29   3.3  
Z68000-3|CAA91971.1| 1225|Caenorhabditis elegans Hypothetical pr...    29   4.4  
U97016-10|AAP68963.1|  181|Caenorhabditis elegans Hypothetical p...    29   4.4  
AC024791-8|AAF60652.1|  230|Caenorhabditis elegans Hypothetical ...    29   4.4  
U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical pr...    28   5.8  
AF068713-3|AAC17793.1|  286|Caenorhabditis elegans Serpentine re...    28   5.8  

>U70851-2|AAM97996.1|  671|Caenorhabditis elegans Osmotic avoidance
           abnormal protein3, isoform a protein.
          Length = 671

 Score = 32.3 bits (70), Expect = 0.36
 Identities = 20/61 (32%), Positives = 33/61 (54%)
 Frame = +1

Query: 412 NKNEIKENSSLNDNQEILILSEASMSLSGVFSSPTISQASQKSPTQAADSLLRSELDMKL 591
           N + IK+ +  N+++   IL E SMS + +   P  +    + P +  ++LLRS  D KL
Sbjct: 534 NVDRIKKEAVWNEDESRWILPEMSMSRTIL---PLANNGYMQEPARQENTLLRSNFDDKL 590

Query: 592 R 594
           R
Sbjct: 591 R 591


>U70851-1|AAM97997.1|  699|Caenorhabditis elegans Osmotic avoidance
           abnormal protein3, isoform b protein.
          Length = 699

 Score = 32.3 bits (70), Expect = 0.36
 Identities = 20/61 (32%), Positives = 33/61 (54%)
 Frame = +1

Query: 412 NKNEIKENSSLNDNQEILILSEASMSLSGVFSSPTISQASQKSPTQAADSLLRSELDMKL 591
           N + IK+ +  N+++   IL E SMS + +   P  +    + P +  ++LLRS  D KL
Sbjct: 562 NVDRIKKEAVWNEDESRWILPEMSMSRTIL---PLANNGYMQEPARQENTLLRSNFDDKL 618

Query: 592 R 594
           R
Sbjct: 619 R 619


>AF149285-1|AAF99084.1|  672|Caenorhabditis elegans Osm-3 protein.
          Length = 672

 Score = 32.3 bits (70), Expect = 0.36
 Identities = 20/61 (32%), Positives = 33/61 (54%)
 Frame = +1

Query: 412 NKNEIKENSSLNDNQEILILSEASMSLSGVFSSPTISQASQKSPTQAADSLLRSELDMKL 591
           N + IK+ +  N+++   IL E SMS + +   P  +    + P +  ++LLRS  D KL
Sbjct: 534 NVDRIKKEAVWNEDESRWILPEMSMSRTIL---PLANNGYMQEPARQENTLLRSNFDDKL 590

Query: 592 R 594
           R
Sbjct: 591 R 591


>Z70311-6|CAA94379.3|  442|Caenorhabditis elegans Hypothetical
           protein T25B9.8 protein.
          Length = 442

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 16/70 (22%), Positives = 37/70 (52%)
 Frame = +1

Query: 370 ESSLENEFSTNEMFNKNEIKENSSLNDNQEILILSEASMSLSGVFSSPTISQASQKSPTQ 549
           ESS++NEF  N   N N++ ++S   ++Q+I +   +    + + + P++     +  + 
Sbjct: 145 ESSMDNEFDANSE-NSNDMAQSSPNVNSQDIKLEPISDYDDAPIETKPSLEDLQMQENSN 203

Query: 550 AADSLLRSEL 579
           A +S   S++
Sbjct: 204 AGNSTSESQI 213


>Z73423-1|CAA97776.2|  492|Caenorhabditis elegans Hypothetical
           protein C03A3.2 protein.
          Length = 492

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 18/55 (32%), Positives = 28/55 (50%)
 Frame = +3

Query: 6   VTLFPQLICAIWY*FYILSLNVSNNMNDSQKFIDKDISLRNSYLLESQSLEEDTD 170
           + LFP  I  +   + I++L + NN N  +  +   +   N  LLE+ SL ED D
Sbjct: 325 LALFP--IITLTSSYPIIALTLINNFNVVKDILCPKVGQENESLLEADSLVEDND 377


>AL132949-38|CAB61092.3| 1099|Caenorhabditis elegans Hypothetical
           protein Y53F4B.21 protein.
          Length = 1099

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 29/102 (28%), Positives = 48/102 (47%), Gaps = 6/102 (5%)
 Frame = +1

Query: 370 ESSLENEF-STNEMFNKNEIKENSSLNDNQEILILSEASMSLSGVFSSPTISQASQKSPT 546
           E S +N F S  E+F K  ++E SS++ ++   +L E         +     Q  ++  T
Sbjct: 331 EISNKNIFDSKTEIFAKKLVQEASSISKDRADEMLKEVKEYCEHASTWMLEFQQKKRDQT 390

Query: 547 QAADSLLR-----SELDMKLRIALEFLHRDNEFLIAAELGDD 657
           +A   L +     SEL +K    LE + RD   LI ++ G+D
Sbjct: 391 EAITKLPQWGLDVSELFLKCIRILETITRDLYLLIRSKRGED 432


>AF480439-1|AAM76083.1| 1037|Caenorhabditis elegans dicer-related
           helicase protein.
          Length = 1037

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 24/82 (29%), Positives = 39/82 (47%), Gaps = 3/82 (3%)
 Frame = +1

Query: 361 HIAESSLENEFSTNEMFNKNEIKE---NSSLNDNQEILILSEASMSLSGVFSSPTISQAS 531
           +I E +L+   S   +F +   +    N  LN N+E+L+L   S  +SG+  S T S A 
Sbjct: 689 YIVEQNLQRADSRTIIFVRTRYEATILNKVLNSNEELLMLGIKSEWMSGLNKS-TASSAD 747

Query: 532 QKSPTQAADSLLRSELDMKLRI 597
             +  Q     L+   D ++RI
Sbjct: 748 ISASKQKQMEKLKMFADGEIRI 769


>AF036696-4|AAB88350.1| 1037|Caenorhabditis elegans Dicer related
           helicase protein 1 protein.
          Length = 1037

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 24/82 (29%), Positives = 39/82 (47%), Gaps = 3/82 (3%)
 Frame = +1

Query: 361 HIAESSLENEFSTNEMFNKNEIKE---NSSLNDNQEILILSEASMSLSGVFSSPTISQAS 531
           +I E +L+   S   +F +   +    N  LN N+E+L+L   S  +SG+  S T S A 
Sbjct: 689 YIVEQNLQRADSRTIIFVRTRYEATILNKVLNSNEELLMLGIKSEWMSGLNKS-TASSAD 747

Query: 532 QKSPTQAADSLLRSELDMKLRI 597
             +  Q     L+   D ++RI
Sbjct: 748 ISASKQKQMEKLKMFADGEIRI 769


>Z68000-3|CAA91971.1| 1225|Caenorhabditis elegans Hypothetical
           protein C05C9.3 protein.
          Length = 1225

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 19/72 (26%), Positives = 34/72 (47%)
 Frame = +1

Query: 373 SSLENEFSTNEMFNKNEIKENSSLNDNQEILILSEASMSLSGVFSSPTISQASQKSPTQA 552
           S LE E S N + N N  K      +  EI  +++  +   G F+SP +   +++     
Sbjct: 382 SHLELESSQNSIHNDNRKKNEDYDMEISEIETITQRQLEGYGTFNSPEMK--NERIVNSD 439

Query: 553 ADSLLRSELDMK 588
            +  + S++DMK
Sbjct: 440 TNIDIESQIDMK 451


>U97016-10|AAP68963.1|  181|Caenorhabditis elegans Hypothetical
           protein B0261.8 protein.
          Length = 181

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 20/59 (33%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
 Frame = +1

Query: 370 ESSLENEFSTN-EMFNKNEIKENSSLNDNQEILILSEASMSLSGVFSSPTISQASQKSP 543
           E +LEN F    E  N NE +EN   ND      L+EA   +  VFS+  ++      P
Sbjct: 120 EDTLENLFEKETESNNTNEQQENVETNDTTSNFDLNEAEERVD-VFSNGLLTSIQSTQP 177


>AC024791-8|AAF60652.1|  230|Caenorhabditis elegans Hypothetical
           protein Y47G6A.9 protein.
          Length = 230

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 18/47 (38%), Positives = 28/47 (59%), Gaps = 4/47 (8%)
 Frame = +1

Query: 586 KLRIALEFLHRDNEFLIAAELGDDI--LLDKY--IKQGENIQQMDHL 714
           +L++ L+   RD++F I AE  D+I   LDKY  IK+ +    M H+
Sbjct: 73  RLKVELDQRMRDSQFFIEAEKDDEIKRYLDKYSNIKREKLSIDMSHM 119


>U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical protein
            K06A9.1b protein.
          Length = 2232

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 19/68 (27%), Positives = 31/68 (45%)
 Frame = +1

Query: 358  SHIAESSLENEFSTNEMFNKNEIKENSSLNDNQEILILSEASMSLSGVFSSPTISQASQK 537
            S I++ S E   ST     K      S+ + +   +  +EAS +  G  +SP  SQ++  
Sbjct: 1043 STISQGSTETPGSTGSTVTKPSTVSGSASSGSTATMGSTEASSTSGGSSTSPNPSQSTSP 1102

Query: 538  SPTQAADS 561
            S + A  S
Sbjct: 1103 STSGATSS 1110


>AF068713-3|AAC17793.1|  286|Caenorhabditis elegans Serpentine
           receptor, class bc (class b-like) protein 66 protein.
          Length = 286

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 26/81 (32%), Positives = 40/81 (49%), Gaps = 1/81 (1%)
 Frame = -3

Query: 694 CFRLALYI-YPVIYHHQALQRLKTHYLYVGILELFLISYPIHCVIRNLLLVLETFATLAK 518
           CFRL ++  Y  I+ +Q L R     L   ++ +F  S  I   I  LL  L +FA++  
Sbjct: 191 CFRLFIWNNYVAIHANQVLSRATRIALLDSVI-IFSFSI-IPSFIFELLPTL-SFASVGP 247

Query: 517 WWVMKKHQISSLKLLIRSRFL 455
           W ++ KH    ++ LI  R L
Sbjct: 248 WTIVFKHAGFMIESLIVCRLL 268


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,695,946
Number of Sequences: 27780
Number of extensions: 282993
Number of successful extensions: 966
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 939
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 964
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1676746902
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)