Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte4o13
(727 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U73522-1|AAD05037.1| 424|Homo sapiens AMSH protein. 32 2.4
BC101469-1|AAI01470.1| 424|Homo sapiens STAM binding protein pr... 32 2.4
BC101467-1|AAI01468.1| 424|Homo sapiens STAM binding protein pr... 32 2.4
BC065574-1|AAH65574.1| 424|Homo sapiens STAM binding protein pr... 32 2.4
BC007682-1|AAH07682.1| 424|Homo sapiens STAM binding protein pr... 32 2.4
AC073046-1|AAX88908.1| 424|Homo sapiens unknown protein. 32 2.4
BC108257-1|AAI08258.1| 431|Homo sapiens intraflagellar transpor... 31 5.6
BC005396-1|AAH05396.1| 336|Homo sapiens Unknown (protein for IM... 31 5.6
BC004536-1|AAH04536.2| 431|Homo sapiens intraflagellar transpor... 31 5.6
AK091549-1|BAC03690.1| 623|Homo sapiens protein ( Homo sapiens ... 31 5.6
AF332010-1|AAO32947.1| 676|Homo sapiens CDV-1R variant b protein. 31 5.6
AF250326-1|AAL50343.1| 676|Homo sapiens CDV-1R protein. 31 5.6
AF139540-1|AAP97269.1| 676|Homo sapiens CDV protein protein. 31 5.6
BC117149-1|AAI17150.1| 1047|Homo sapiens ST18 protein protein. 30 9.7
BC117147-1|AAI17148.1| 1047|Homo sapiens ST18 protein protein. 30 9.7
BC047324-1|AAH47324.1| 1217|Homo sapiens structural maintenance ... 30 9.7
AL359260-2|CAI16576.1| 1217|Homo sapiens structural maintenance ... 30 9.7
AF020043-1|AAC14893.1| 1217|Homo sapiens chromosome-associated p... 30 9.7
AB011107-1|BAA25461.1| 1047|Homo sapiens KIAA0535 protein protein. 30 9.7
>U73522-1|AAD05037.1| 424|Homo sapiens AMSH protein.
Length = 424
Score = 31.9 bits (69), Expect = 2.4
Identities = 21/87 (24%), Positives = 41/87 (47%)
Frame = +2
Query: 140 LPKEFEKKSEVLPFTKYGLSSIEEFSRAEEEVRHLELLKKAGLTTDEIKLYQENECGKLN 319
LPK + KS V+P K + ++E + + E ELLK+ E ++ E +L
Sbjct: 74 LPKHRDYKSAVIPEKKDTVKKLKEIAFPKAEELKAELLKRYTKEYTEYNEEKKKEAEELA 133
Query: 320 QQNKVETGVLKQKLHYIYTRIQNLKEQ 400
+ ++ + K+K + Q L+++
Sbjct: 134 RNMAIQQELEKEKQRVAQQKQQQLEQE 160
>BC101469-1|AAI01470.1| 424|Homo sapiens STAM binding protein
protein.
Length = 424
Score = 31.9 bits (69), Expect = 2.4
Identities = 21/87 (24%), Positives = 41/87 (47%)
Frame = +2
Query: 140 LPKEFEKKSEVLPFTKYGLSSIEEFSRAEEEVRHLELLKKAGLTTDEIKLYQENECGKLN 319
LPK + KS V+P K + ++E + + E ELLK+ E ++ E +L
Sbjct: 74 LPKHRDYKSAVIPEKKDTVKKLKEIAFPKAEELKAELLKRYTKEYTEYNEEKKKEAEELA 133
Query: 320 QQNKVETGVLKQKLHYIYTRIQNLKEQ 400
+ ++ + K+K + Q L+++
Sbjct: 134 RNMAIQQELEKEKQRVAQQKQQQLEQE 160
>BC101467-1|AAI01468.1| 424|Homo sapiens STAM binding protein
protein.
Length = 424
Score = 31.9 bits (69), Expect = 2.4
Identities = 21/87 (24%), Positives = 41/87 (47%)
Frame = +2
Query: 140 LPKEFEKKSEVLPFTKYGLSSIEEFSRAEEEVRHLELLKKAGLTTDEIKLYQENECGKLN 319
LPK + KS V+P K + ++E + + E ELLK+ E ++ E +L
Sbjct: 74 LPKHRDYKSAVIPEKKDTVKKLKEIAFPKAEELKAELLKRYTKEYTEYNEEKKKEAEELA 133
Query: 320 QQNKVETGVLKQKLHYIYTRIQNLKEQ 400
+ ++ + K+K + Q L+++
Sbjct: 134 RNMAIQQELEKEKQRVAQQKQQQLEQE 160
>BC065574-1|AAH65574.1| 424|Homo sapiens STAM binding protein
protein.
Length = 424
Score = 31.9 bits (69), Expect = 2.4
Identities = 21/87 (24%), Positives = 41/87 (47%)
Frame = +2
Query: 140 LPKEFEKKSEVLPFTKYGLSSIEEFSRAEEEVRHLELLKKAGLTTDEIKLYQENECGKLN 319
LPK + KS V+P K + ++E + + E ELLK+ E ++ E +L
Sbjct: 74 LPKHRDYKSAVIPEKKDTVKKLKEIAFPKAEELKAELLKRYTKEYTEYNEEKKKEAEELA 133
Query: 320 QQNKVETGVLKQKLHYIYTRIQNLKEQ 400
+ ++ + K+K + Q L+++
Sbjct: 134 RNMAIQQELEKEKQRVAQQKQQQLEQE 160
>BC007682-1|AAH07682.1| 424|Homo sapiens STAM binding protein
protein.
Length = 424
Score = 31.9 bits (69), Expect = 2.4
Identities = 21/87 (24%), Positives = 41/87 (47%)
Frame = +2
Query: 140 LPKEFEKKSEVLPFTKYGLSSIEEFSRAEEEVRHLELLKKAGLTTDEIKLYQENECGKLN 319
LPK + KS V+P K + ++E + + E ELLK+ E ++ E +L
Sbjct: 74 LPKHRDYKSAVIPEKKDTVKKLKEIAFPKAEELKAELLKRYTKEYTEYNEEKKKEAEELA 133
Query: 320 QQNKVETGVLKQKLHYIYTRIQNLKEQ 400
+ ++ + K+K + Q L+++
Sbjct: 134 RNMAIQQELEKEKQRVAQQKQQQLEQE 160
>AC073046-1|AAX88908.1| 424|Homo sapiens unknown protein.
Length = 424
Score = 31.9 bits (69), Expect = 2.4
Identities = 21/87 (24%), Positives = 41/87 (47%)
Frame = +2
Query: 140 LPKEFEKKSEVLPFTKYGLSSIEEFSRAEEEVRHLELLKKAGLTTDEIKLYQENECGKLN 319
LPK + KS V+P K + ++E + + E ELLK+ E ++ E +L
Sbjct: 74 LPKHRDYKSAVIPEKKDTVKKLKEIAFPKAEELKAELLKRYTKEYTEYNEEKKKEAEELA 133
Query: 320 QQNKVETGVLKQKLHYIYTRIQNLKEQ 400
+ ++ + K+K + Q L+++
Sbjct: 134 RNMAIQQELEKEKQRVAQQKQQQLEQE 160
>BC108257-1|AAI08258.1| 431|Homo sapiens intraflagellar transport
81 homolog (Chlamydomonas) protein.
Length = 431
Score = 30.7 bits (66), Expect = 5.6
Identities = 29/124 (23%), Positives = 55/124 (44%), Gaps = 10/124 (8%)
Frame = +2
Query: 146 KEFEKKSEVLPFTKYGLSSI-EEFSRAEEE----VRHLELLKKAGLTTDE----IKLYQE 298
K K+ E L + + + I ++ S EEE ++ +E LKK T +K+ ++
Sbjct: 152 KTLHKEYEQLKISGFSTAEIRKDISAMEEEKDQLIKRVEHLKKRVETAQNHQWMLKIARQ 211
Query: 299 NECGKLNQQNKVETGV-LKQKLHYIYTRIQNLKEQVKQQNNQPSTSKTDVSIKNLERNIP 475
K ++ + K +L + R+Q ++ Q+K + +K + +K LE I
Sbjct: 212 LRVEKEREEYLAQQKQEQKNQLFHAVQRLQRVQNQLKSMRQAAADAKPESLMKRLEEEIK 271
Query: 476 KNTY 487
N Y
Sbjct: 272 FNLY 275
>BC005396-1|AAH05396.1| 336|Homo sapiens Unknown (protein for
IMAGE:3685327) protein.
Length = 336
Score = 30.7 bits (66), Expect = 5.6
Identities = 29/124 (23%), Positives = 55/124 (44%), Gaps = 10/124 (8%)
Frame = +2
Query: 146 KEFEKKSEVLPFTKYGLSSI-EEFSRAEEE----VRHLELLKKAGLTTDE----IKLYQE 298
K K+ E L + + + I ++ S EEE ++ +E LKK T +K+ ++
Sbjct: 152 KTLHKEYEQLKISGFSTAEIRKDISAMEEEKDQLIKRVEHLKKRVETAQNHQWMLKIARQ 211
Query: 299 NECGKLNQQNKVETGV-LKQKLHYIYTRIQNLKEQVKQQNNQPSTSKTDVSIKNLERNIP 475
K ++ + K +L + R+Q ++ Q+K + +K + +K LE I
Sbjct: 212 LRVEKEREEYLAQQKQEQKNQLFHAVQRLQRVQNQLKSMRQAAADAKPESLMKRLEEEIK 271
Query: 476 KNTY 487
N Y
Sbjct: 272 FNLY 275
>BC004536-1|AAH04536.2| 431|Homo sapiens intraflagellar transport
81 homolog (Chlamydomonas) protein.
Length = 431
Score = 30.7 bits (66), Expect = 5.6
Identities = 29/124 (23%), Positives = 55/124 (44%), Gaps = 10/124 (8%)
Frame = +2
Query: 146 KEFEKKSEVLPFTKYGLSSI-EEFSRAEEE----VRHLELLKKAGLTTDE----IKLYQE 298
K K+ E L + + + I ++ S EEE ++ +E LKK T +K+ ++
Sbjct: 152 KTLHKEYEQLKISGFSTAEIRKDISAMEEEKDQLIKRVEHLKKRVETAQNHQWMLKIARQ 211
Query: 299 NECGKLNQQNKVETGV-LKQKLHYIYTRIQNLKEQVKQQNNQPSTSKTDVSIKNLERNIP 475
K ++ + K +L + R+Q ++ Q+K + +K + +K LE I
Sbjct: 212 LRVEKEREEYLAQQKQEQKNQLFHAVQRLQRVQNQLKSMRQAAADAKPESLMKRLEEEIK 271
Query: 476 KNTY 487
N Y
Sbjct: 272 FNLY 275
>AK091549-1|BAC03690.1| 623|Homo sapiens protein ( Homo sapiens
cDNA FLJ34230 fis, clone FCBBF3025737, highly similar to
CARNITINE DEFICIENCY-ASSOCIATED PROTEIN EXPRESSED IN
VENTRICLE ).
Length = 623
Score = 30.7 bits (66), Expect = 5.6
Identities = 29/124 (23%), Positives = 55/124 (44%), Gaps = 10/124 (8%)
Frame = +2
Query: 146 KEFEKKSEVLPFTKYGLSSI-EEFSRAEEE----VRHLELLKKAGLTTDE----IKLYQE 298
K K+ E L + + + I ++ S EEE ++ +E LKK T +K+ ++
Sbjct: 121 KTLHKEYEQLKISGFSTAEIRKDISAMEEEKDQLIKRVEHLKKRVETAQNHQWMLKIARQ 180
Query: 299 NECGKLNQQNKVETGV-LKQKLHYIYTRIQNLKEQVKQQNNQPSTSKTDVSIKNLERNIP 475
K ++ + K +L + R+Q ++ Q+K + +K + +K LE I
Sbjct: 181 LRVEKEREEYLAQQKQEQKNQLFHAVQRLQRVQNQLKSMRQAAADAKPESLMKRLEEEIK 240
Query: 476 KNTY 487
N Y
Sbjct: 241 FNLY 244
>AF332010-1|AAO32947.1| 676|Homo sapiens CDV-1R variant b protein.
Length = 676
Score = 30.7 bits (66), Expect = 5.6
Identities = 29/124 (23%), Positives = 55/124 (44%), Gaps = 10/124 (8%)
Frame = +2
Query: 146 KEFEKKSEVLPFTKYGLSSI-EEFSRAEEE----VRHLELLKKAGLTTDE----IKLYQE 298
K K+ E L + + + I ++ S EEE ++ +E LKK T +K+ ++
Sbjct: 152 KTLHKEYEQLKISGFSTAEIRKDISAMEEEKDQLIKRVEHLKKRVETAQNHQWMLKIARQ 211
Query: 299 NECGKLNQQNKVETGV-LKQKLHYIYTRIQNLKEQVKQQNNQPSTSKTDVSIKNLERNIP 475
K ++ + K +L + R+Q ++ Q+K + +K + +K LE I
Sbjct: 212 LRVEKEREEYLAQQKQEQKNQLFHAVQRLQRVQNQLKSMRQAAADAKPESLMKRLEEEIK 271
Query: 476 KNTY 487
N Y
Sbjct: 272 FNLY 275
>AF250326-1|AAL50343.1| 676|Homo sapiens CDV-1R protein.
Length = 676
Score = 30.7 bits (66), Expect = 5.6
Identities = 29/124 (23%), Positives = 55/124 (44%), Gaps = 10/124 (8%)
Frame = +2
Query: 146 KEFEKKSEVLPFTKYGLSSI-EEFSRAEEE----VRHLELLKKAGLTTDE----IKLYQE 298
K K+ E L + + + I ++ S EEE ++ +E LKK T +K+ ++
Sbjct: 152 KTLHKEYEQLKISGFSTAEIRKDISAMEEEKDQLIKRVEHLKKRVETAQNHQWMLKIARQ 211
Query: 299 NECGKLNQQNKVETGV-LKQKLHYIYTRIQNLKEQVKQQNNQPSTSKTDVSIKNLERNIP 475
K ++ + K +L + R+Q ++ Q+K + +K + +K LE I
Sbjct: 212 LRVEKEREEYLAQQKQEQKNQLFHAVQRLQRVQNQLKSMRQAAADAKPESLMKRLEEEIK 271
Query: 476 KNTY 487
N Y
Sbjct: 272 FNLY 275
>AF139540-1|AAP97269.1| 676|Homo sapiens CDV protein protein.
Length = 676
Score = 30.7 bits (66), Expect = 5.6
Identities = 29/124 (23%), Positives = 55/124 (44%), Gaps = 10/124 (8%)
Frame = +2
Query: 146 KEFEKKSEVLPFTKYGLSSI-EEFSRAEEE----VRHLELLKKAGLTTDE----IKLYQE 298
K K+ E L + + + I ++ S EEE ++ +E LKK T +K+ ++
Sbjct: 152 KTLHKEYEQLKISGFSTAEIRKDISAMEEEKDQLIKRVEHLKKRVETAQNHQWMLKIARQ 211
Query: 299 NECGKLNQQNKVETGV-LKQKLHYIYTRIQNLKEQVKQQNNQPSTSKTDVSIKNLERNIP 475
K ++ + K +L + R+Q ++ Q+K + +K + +K LE I
Sbjct: 212 LRVEKEREEYLAQQKQEQKNQLFHAVQRLQRVQNQLKSMRQAAADAKPESLMKRLEEEIK 271
Query: 476 KNTY 487
N Y
Sbjct: 272 FNLY 275
>BC117149-1|AAI17150.1| 1047|Homo sapiens ST18 protein protein.
Length = 1047
Score = 29.9 bits (64), Expect = 9.7
Identities = 18/73 (24%), Positives = 42/73 (57%), Gaps = 5/73 (6%)
Frame = +2
Query: 218 RAEEEVRHLELLKKAGLTTDEIKLYQENECGKLNQQN-KVETGVLK--QKLHYIYTRIQN 388
+ EE+ ++L G+ +DE + + E +LN+ N K+E ++K ++ + + ++
Sbjct: 904 KVSEELMTIKLKATGGIESDEEIRHLDEEIKELNESNLKIEADMMKLQTQITSMESNLKT 963
Query: 389 LKEQVK--QQNNQ 421
++E+ K +QNN+
Sbjct: 964 IEEENKLIEQNNE 976
>BC117147-1|AAI17148.1| 1047|Homo sapiens ST18 protein protein.
Length = 1047
Score = 29.9 bits (64), Expect = 9.7
Identities = 18/73 (24%), Positives = 42/73 (57%), Gaps = 5/73 (6%)
Frame = +2
Query: 218 RAEEEVRHLELLKKAGLTTDEIKLYQENECGKLNQQN-KVETGVLK--QKLHYIYTRIQN 388
+ EE+ ++L G+ +DE + + E +LN+ N K+E ++K ++ + + ++
Sbjct: 904 KVSEELMTIKLKATGGIESDEEIRHLDEEIKELNESNLKIEADMMKLQTQITSMESNLKT 963
Query: 389 LKEQVK--QQNNQ 421
++E+ K +QNN+
Sbjct: 964 IEEENKLIEQNNE 976
>BC047324-1|AAH47324.1| 1217|Homo sapiens structural maintenance of
chromosomes 3 protein.
Length = 1217
Score = 29.9 bits (64), Expect = 9.7
Identities = 17/60 (28%), Positives = 33/60 (55%)
Frame = +2
Query: 242 LELLKKAGLTTDEIKLYQENECGKLNQQNKVETGVLKQKLHYIYTRIQNLKEQVKQQNNQ 421
LE K+ DEI+ Q+ LN++ K+E G++ + Y+ ++ +QV+Q+ N+
Sbjct: 791 LEDQKRVDALNDEIRQLQQENRQLLNERIKLE-GIITRVETYLNENLRKRLDQVEQELNE 849
>AL359260-2|CAI16576.1| 1217|Homo sapiens structural maintenance of
chromosomes 3 protein.
Length = 1217
Score = 29.9 bits (64), Expect = 9.7
Identities = 17/60 (28%), Positives = 33/60 (55%)
Frame = +2
Query: 242 LELLKKAGLTTDEIKLYQENECGKLNQQNKVETGVLKQKLHYIYTRIQNLKEQVKQQNNQ 421
LE K+ DEI+ Q+ LN++ K+E G++ + Y+ ++ +QV+Q+ N+
Sbjct: 791 LEDQKRVDALNDEIRQLQQENRQLLNERIKLE-GIITRVETYLNENLRKRLDQVEQELNE 849
>AF020043-1|AAC14893.1| 1217|Homo sapiens chromosome-associated
polypeptide protein.
Length = 1217
Score = 29.9 bits (64), Expect = 9.7
Identities = 17/60 (28%), Positives = 33/60 (55%)
Frame = +2
Query: 242 LELLKKAGLTTDEIKLYQENECGKLNQQNKVETGVLKQKLHYIYTRIQNLKEQVKQQNNQ 421
LE K+ DEI+ Q+ LN++ K+E G++ + Y+ ++ +QV+Q+ N+
Sbjct: 791 LEDQKRVDALNDEIRQLQQENRQLLNERIKLE-GIITRVETYLNENLRKRLDQVEQELNE 849
>AB011107-1|BAA25461.1| 1047|Homo sapiens KIAA0535 protein protein.
Length = 1047
Score = 29.9 bits (64), Expect = 9.7
Identities = 18/73 (24%), Positives = 42/73 (57%), Gaps = 5/73 (6%)
Frame = +2
Query: 218 RAEEEVRHLELLKKAGLTTDEIKLYQENECGKLNQQN-KVETGVLK--QKLHYIYTRIQN 388
+ EE+ ++L G+ +DE + + E +LN+ N K+E ++K ++ + + ++
Sbjct: 904 KVSEELMTIKLKATGGIESDEEIRHLDEEIKELNESNLKIEADMMKLQTQITSMESNLKT 963
Query: 389 LKEQVK--QQNNQ 421
++E+ K +QNN+
Sbjct: 964 IEEENKLIEQNNE 976
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 78,090,326
Number of Sequences: 237096
Number of extensions: 1348379
Number of successful extensions: 3427
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 3253
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3427
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8567175942
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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