Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte4o12
(710 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81564-6|CAB04572.1| 678|Caenorhabditis elegans Hypothetical pr... 182 2e-46
AF016853-1|AAB94552.1| 678|Caenorhabditis elegans HMP-2 protein. 182 2e-46
U46673-7|AAC48154.1| 811|Caenorhabditis elegans Beta-catenin/ar... 118 3e-27
AF063646-1|AAC17424.1| 811|Caenorhabditis elegans beta-catenin/... 118 3e-27
AL110479-24|CAJ76966.1| 1084|Caenorhabditis elegans Hypothetical... 40 0.002
AL110479-23|CAB60320.2| 1254|Caenorhabditis elegans Hypothetical... 40 0.002
U41992-1|AAA83354.2| 514|Caenorhabditis elegans Importin alpha ... 29 2.5
AF040995-1|AAB97171.1| 514|Caenorhabditis elegans importin alph... 29 2.5
AF005266-1|AAQ13407.1| 423|Caenorhabditis elegans importin alph... 29 2.5
U97017-1|AAB52363.1| 2643|Caenorhabditis elegans Temporarily ass... 29 3.3
U80444-4|AAB37790.1| 531|Caenorhabditis elegans Importin alpha ... 29 4.3
AF326936-1|AAG49386.1| 531|Caenorhabditis elegans importin beta... 29 4.3
AF040996-1|AAB97172.1| 531|Caenorhabditis elegans importin alph... 29 4.3
AF016429-1|AAB65365.2| 518|Caenorhabditis elegans Hypothetical ... 29 4.3
>Z81564-6|CAB04572.1| 678|Caenorhabditis elegans Hypothetical
protein K05C4.6 protein.
Length = 678
Score = 182 bits (444), Expect = 2e-46
Identities = 96/234 (41%), Positives = 138/234 (58%), Gaps = 2/234 (0%)
Frame = +1
Query: 1 NLSHHRQGLLAIFKSGGIPALVKLLSSPVEAVLFYAITTLHNLLLHQDGSKMAVRLAGGL 180
++S R G L IF+SGG+ ++++L +E+V+ YA+TTL NLL+H S+ R +
Sbjct: 148 HMSEQRGGPLLIFRSGGLAEIIRMLYDSLESVVHYAVTTLRNLLMHVSDSRAQARALNAV 207
Query: 181 QKMVALLQRNNVKFLAIVTDCLQILAYGNQESKLIILASQGPIELVRIMRSY-DYEKLLW 357
+ + L + N K LA V D L L + SK+ L+ GP LV I+R Y D+ KL++
Sbjct: 208 EALTPHLHKTNPKLLAQVADGLYFLLIDDAPSKITFLSLLGPQILVSILREYSDHRKLIY 267
Query: 358 TTSRVLKVLSVCSSNKPAIVEAGGMQALAMHLGNPSGRLVQNC-LWTLRNLSDAATKVEG 534
T R ++ LSVC SNKPA++ G + AL + L Q L +RNLSD+AT E
Sbjct: 268 TVVRCIRSLSVCPSNKPALISLGCLPALYVELCTAKDERSQTAILVAMRNLSDSATNEEN 327
Query: 535 LEALLQSLVQVLASTDVNIVTCAAGILSNLTCNNQRNKMTVCQVGGVDALVRTV 696
L L+ L++++ + + CA G LSNLTCNN RNK TVC GG+DALV +
Sbjct: 328 LTQLIIKLLEIIRVANDGMTACACGTLSNLTCNNTRNKQTVCSHGGIDALVTAI 381
>AF016853-1|AAB94552.1| 678|Caenorhabditis elegans HMP-2 protein.
Length = 678
Score = 182 bits (444), Expect = 2e-46
Identities = 96/234 (41%), Positives = 138/234 (58%), Gaps = 2/234 (0%)
Frame = +1
Query: 1 NLSHHRQGLLAIFKSGGIPALVKLLSSPVEAVLFYAITTLHNLLLHQDGSKMAVRLAGGL 180
++S R G L IF+SGG+ ++++L +E+V+ YA+TTL NLL+H S+ R +
Sbjct: 148 HMSEQRGGPLLIFRSGGLAEIIRMLYDSLESVVHYAVTTLRNLLMHVSDSRAQARALNAV 207
Query: 181 QKMVALLQRNNVKFLAIVTDCLQILAYGNQESKLIILASQGPIELVRIMRSY-DYEKLLW 357
+ + L + N K LA V D L L + SK+ L+ GP LV I+R Y D+ KL++
Sbjct: 208 EALTPHLHKTNPKLLAQVADGLYFLLIDDAPSKITFLSLLGPQILVSILREYSDHRKLIY 267
Query: 358 TTSRVLKVLSVCSSNKPAIVEAGGMQALAMHLGNPSGRLVQNC-LWTLRNLSDAATKVEG 534
T R ++ LSVC SNKPA++ G + AL + L Q L +RNLSD+AT E
Sbjct: 268 TVVRCIRSLSVCPSNKPALISLGCLPALYVELCTAKDERSQTAILVAMRNLSDSATNEEN 327
Query: 535 LEALLQSLVQVLASTDVNIVTCAAGILSNLTCNNQRNKMTVCQVGGVDALVRTV 696
L L+ L++++ + + CA G LSNLTCNN RNK TVC GG+DALV +
Sbjct: 328 LTQLIIKLLEIIRVANDGMTACACGTLSNLTCNNTRNKQTVCSHGGIDALVTAI 381
>U46673-7|AAC48154.1| 811|Caenorhabditis elegans
Beta-catenin/armadillo relatedprotein 1 protein.
Length = 811
Score = 118 bits (285), Expect = 3e-27
Identities = 74/222 (33%), Positives = 126/222 (56%), Gaps = 4/222 (1%)
Frame = +1
Query: 52 IPALVKLLSSPVEAVLFYAITTLHNLLLHQDGSKMAVRLA---GGLQKMVALLQ-RNNVK 219
IP L++ + + ++ YAI T+H++L + +V +A + + L+ + K
Sbjct: 215 IPNLIRHIGTYPSSIYKYAILTMHSILSDKQRGGQSVIIARQQDAITHVTPWLEAEKSEK 274
Query: 220 FLAIVTDCLQILAYGNQESKLIILASQGPIELVRIMRSYDYEKLLWTTSRVLKVLSVCSS 399
L ++ D +++L N E K+ + GP +L+ +++ YE LLW T+++LK S +
Sbjct: 275 LLPVIVDLIRVLCEKNTEQKIKFVKMGGPQKLLMLLQHRVYENLLWRTTQLLKTFS--NF 332
Query: 400 NKPAIVEAGGMQALAMHLGNPSGRLVQNCLWTLRNLSDAATKVEGLEALLQSLVQVLAST 579
+ P +V GG Q LA L + S RLVQ+ L TLRN+SD +K++ + LL+SL++++ S
Sbjct: 333 DAPNLVAFGGRQILANLLSHGSPRLVQSTLETLRNISDVPSKIKE-DLLLKSLLELVNSR 391
Query: 580 DVNIVTCAAGILSNLTCNNQRNKMTVCQVGGVDALVRTVVSA 705
+ I +A I+SNL NN+ NK +C GV LVR + A
Sbjct: 392 NTTIRLYSAQIMSNLVANNRHNKEFMCGNNGVVILVRALTIA 433
>AF063646-1|AAC17424.1| 811|Caenorhabditis elegans
beta-catenin/armadillo homologBAR-1 protein.
Length = 811
Score = 118 bits (285), Expect = 3e-27
Identities = 74/222 (33%), Positives = 126/222 (56%), Gaps = 4/222 (1%)
Frame = +1
Query: 52 IPALVKLLSSPVEAVLFYAITTLHNLLLHQDGSKMAVRLA---GGLQKMVALLQ-RNNVK 219
IP L++ + + ++ YAI T+H++L + +V +A + + L+ + K
Sbjct: 215 IPNLIRHIGTYPSSIYKYAILTMHSILSDKQRGGQSVIIARQQDAITHVTPWLEAEKSEK 274
Query: 220 FLAIVTDCLQILAYGNQESKLIILASQGPIELVRIMRSYDYEKLLWTTSRVLKVLSVCSS 399
L ++ D +++L N E K+ + GP +L+ +++ YE LLW T+++LK S +
Sbjct: 275 LLPVIVDLIRVLCEKNTEQKIKFVKMGGPQKLLMLLQHRVYENLLWRTTQLLKTFS--NF 332
Query: 400 NKPAIVEAGGMQALAMHLGNPSGRLVQNCLWTLRNLSDAATKVEGLEALLQSLVQVLAST 579
+ P +V GG Q LA L + S RLVQ+ L TLRN+SD +K++ + LL+SL++++ S
Sbjct: 333 DAPNLVAFGGRQILANLLSHGSPRLVQSTLETLRNISDVPSKIKE-DLLLKSLLELVNSR 391
Query: 580 DVNIVTCAAGILSNLTCNNQRNKMTVCQVGGVDALVRTVVSA 705
+ I +A I+SNL NN+ NK +C GV LVR + A
Sbjct: 392 NTTIRLYSAQIMSNLVANNRHNKEFMCGNNGVVILVRALTIA 433
>AL110479-24|CAJ76966.1| 1084|Caenorhabditis elegans Hypothetical
protein Y105C5B.21b protein.
Length = 1084
Score = 39.5 bits (88), Expect = 0.002
Identities = 30/131 (22%), Positives = 60/131 (45%), Gaps = 2/131 (1%)
Frame = +1
Query: 37 FKSGGIPALVKLLSSPVEAVLFYAITTLHNLLLHQDGSKMAVRLAGGLQKMVALLQRNNV 216
++ + +++ LSS + A L +L + K R GG+ K++ALL+ +
Sbjct: 518 WRDPSLKEVIEYLSSADKDKQLNASGYLQHLTYTDNQIKEETREYGGIPKLIALLRSDTP 577
Query: 217 KFLAIVTDCLQILAYG--NQESKLIILASQGPIELVRIMRSYDYEKLLWTTSRVLKVLSV 390
+ CL+ L++G N +KL ++ + G + ++R+ + + L LS
Sbjct: 578 RIQKNACACLKNLSFGKENDANKLAVMEADGVRLIAEVLRTTHDASVKEEAAAALWNLSS 637
Query: 391 CSSNKPAIVEA 423
KP I+E+
Sbjct: 638 ADMLKPVILES 648
Score = 29.1 bits (62), Expect = 3.3
Identities = 30/112 (26%), Positives = 55/112 (49%), Gaps = 6/112 (5%)
Frame = +1
Query: 310 ELVRIMRSYDYEKLLWTTSRVLKVLSVCSSNKPAIVEAGGMQALAMHLGNPSGRLVQNCL 489
E++ + S D +K L + + + + K E GG+ L L + + R+ +N
Sbjct: 525 EVIEYLSSADKDKQLNASGYLQHLTYTDNQIKEETREYGGIPKLIALLRSDTPRIQKNAC 584
Query: 490 WTLRNLS----DAATKVEGLEA-LLQSLVQVLAST-DVNIVTCAAGILSNLT 627
L+NLS + A K+ +EA ++ + +VL +T D ++ AA L NL+
Sbjct: 585 ACLKNLSFGKENDANKLAVMEADGVRLIAEVLRTTHDASVKEEAAAALWNLS 636
>AL110479-23|CAB60320.2| 1254|Caenorhabditis elegans Hypothetical
protein Y105C5B.21a protein.
Length = 1254
Score = 39.5 bits (88), Expect = 0.002
Identities = 30/131 (22%), Positives = 60/131 (45%), Gaps = 2/131 (1%)
Frame = +1
Query: 37 FKSGGIPALVKLLSSPVEAVLFYAITTLHNLLLHQDGSKMAVRLAGGLQKMVALLQRNNV 216
++ + +++ LSS + A L +L + K R GG+ K++ALL+ +
Sbjct: 688 WRDPSLKEVIEYLSSADKDKQLNASGYLQHLTYTDNQIKEETREYGGIPKLIALLRSDTP 747
Query: 217 KFLAIVTDCLQILAYG--NQESKLIILASQGPIELVRIMRSYDYEKLLWTTSRVLKVLSV 390
+ CL+ L++G N +KL ++ + G + ++R+ + + L LS
Sbjct: 748 RIQKNACACLKNLSFGKENDANKLAVMEADGVRLIAEVLRTTHDASVKEEAAAALWNLSS 807
Query: 391 CSSNKPAIVEA 423
KP I+E+
Sbjct: 808 ADMLKPVILES 818
Score = 29.1 bits (62), Expect = 3.3
Identities = 30/112 (26%), Positives = 55/112 (49%), Gaps = 6/112 (5%)
Frame = +1
Query: 310 ELVRIMRSYDYEKLLWTTSRVLKVLSVCSSNKPAIVEAGGMQALAMHLGNPSGRLVQNCL 489
E++ + S D +K L + + + + K E GG+ L L + + R+ +N
Sbjct: 695 EVIEYLSSADKDKQLNASGYLQHLTYTDNQIKEETREYGGIPKLIALLRSDTPRIQKNAC 754
Query: 490 WTLRNLS----DAATKVEGLEA-LLQSLVQVLAST-DVNIVTCAAGILSNLT 627
L+NLS + A K+ +EA ++ + +VL +T D ++ AA L NL+
Sbjct: 755 ACLKNLSFGKENDANKLAVMEADGVRLIAEVLRTTHDASVKEEAAAALWNLS 806
>U41992-1|AAA83354.2| 514|Caenorhabditis elegans Importin alpha
family protein 3 protein.
Length = 514
Score = 29.5 bits (63), Expect = 2.5
Identities = 18/55 (32%), Positives = 27/55 (49%)
Frame = +1
Query: 544 LLQSLVQVLASTDVNIVTCAAGILSNLTCNNQRNKMTVCQVGGVDALVRTVVSAG 708
+L LVQ L+STD N+ AA L+N+ V G V ++ ++S G
Sbjct: 109 ILPVLVQCLSSTDPNLQFEAAWALTNIASGTSEQTQAVVNAGAVPLFLQ-LLSCG 162
>AF040995-1|AAB97171.1| 514|Caenorhabditis elegans importin alpha 3
protein.
Length = 514
Score = 29.5 bits (63), Expect = 2.5
Identities = 18/55 (32%), Positives = 27/55 (49%)
Frame = +1
Query: 544 LLQSLVQVLASTDVNIVTCAAGILSNLTCNNQRNKMTVCQVGGVDALVRTVVSAG 708
+L LVQ L+STD N+ AA L+N+ V G V ++ ++S G
Sbjct: 109 ILPVLVQCLSSTDPNLQFEAAWALTNIASGTSEQTQAVVNAGAVPLFLQ-LLSCG 162
>AF005266-1|AAQ13407.1| 423|Caenorhabditis elegans importin alpha-3
subunit protein.
Length = 423
Score = 29.5 bits (63), Expect = 2.5
Identities = 18/55 (32%), Positives = 27/55 (49%)
Frame = +1
Query: 544 LLQSLVQVLASTDVNIVTCAAGILSNLTCNNQRNKMTVCQVGGVDALVRTVVSAG 708
+L LVQ L+STD N+ AA L+N+ V G V ++ ++S G
Sbjct: 18 ILPVLVQCLSSTDPNLQFEAAWALTNIASGTSEQTQAVVNAGAVPLFLQ-LLSCG 71
>U97017-1|AAB52363.1| 2643|Caenorhabditis elegans Temporarily assigned
gene nameprotein 162 protein.
Length = 2643
Score = 29.1 bits (62), Expect = 3.3
Identities = 16/62 (25%), Positives = 24/62 (38%)
Frame = +3
Query: 51 NSSISETTQLSS*SCALLCYYNTA*PIVASRRFKDGCSSSWRSTKNGGITTKEQCQVPSY 230
N + SS C C+ ++ V K GC+ + KNG E+ P+
Sbjct: 865 NPETTSPCSTSSNICEHFCFASSCKGSVGCEPVKCGCADGMKVLKNGKCVKDEEWVDPNA 924
Query: 231 CD 236
CD
Sbjct: 925 CD 926
>U80444-4|AAB37790.1| 531|Caenorhabditis elegans Importin alpha
family protein 2 protein.
Length = 531
Score = 28.7 bits (61), Expect = 4.3
Identities = 21/95 (22%), Positives = 44/95 (46%), Gaps = 3/95 (3%)
Frame = +1
Query: 412 IVEAGGMQALAMHLGNPSGRLVQNCLWTLRNLSDAATK--VEGLEA-LLQSLVQVLASTD 582
++ G +QAL L + R+ W L N+ +T+ + +EA + L+ +
Sbjct: 128 VIHCGLLQALVQALSVENERVQYEAAWALTNIVSGSTEQTIAAVEAGVTIPLIHLSVHQS 187
Query: 583 VNIVTCAAGILSNLTCNNQRNKMTVCQVGGVDALV 687
I A ++N+ ++ + + V + GV+AL+
Sbjct: 188 AQISEQALWAVANIAGDSSQLRDYVIKCHGVEALM 222
>AF326936-1|AAG49386.1| 531|Caenorhabditis elegans importin beta
binding domain proteinprotein.
Length = 531
Score = 28.7 bits (61), Expect = 4.3
Identities = 21/95 (22%), Positives = 44/95 (46%), Gaps = 3/95 (3%)
Frame = +1
Query: 412 IVEAGGMQALAMHLGNPSGRLVQNCLWTLRNLSDAATK--VEGLEA-LLQSLVQVLASTD 582
++ G +QAL L + R+ W L N+ +T+ + +EA + L+ +
Sbjct: 128 VIHCGLLQALVQALSVENERVQYEAAWALTNIVSGSTEQTIAAVEAGVTIPLIHLSVHQS 187
Query: 583 VNIVTCAAGILSNLTCNNQRNKMTVCQVGGVDALV 687
I A ++N+ ++ + + V + GV+AL+
Sbjct: 188 AQISEQALWAVANIAGDSSQLRDYVIKCHGVEALM 222
>AF040996-1|AAB97172.1| 531|Caenorhabditis elegans importin alpha 2
protein.
Length = 531
Score = 28.7 bits (61), Expect = 4.3
Identities = 21/95 (22%), Positives = 44/95 (46%), Gaps = 3/95 (3%)
Frame = +1
Query: 412 IVEAGGMQALAMHLGNPSGRLVQNCLWTLRNLSDAATK--VEGLEA-LLQSLVQVLASTD 582
++ G +QAL L + R+ W L N+ +T+ + +EA + L+ +
Sbjct: 128 VIHCGLLQALVQALSVENERVQYEAAWALTNIVSGSTEQTIAAVEAGVTIPLIHLSVHQS 187
Query: 583 VNIVTCAAGILSNLTCNNQRNKMTVCQVGGVDALV 687
I A ++N+ ++ + + V + GV+AL+
Sbjct: 188 AQISEQALWAVANIAGDSSQLRDYVIKCHGVEALM 222
>AF016429-1|AAB65365.2| 518|Caenorhabditis elegans Hypothetical
protein T21H3.4 protein.
Length = 518
Score = 28.7 bits (61), Expect = 4.3
Identities = 10/59 (16%), Positives = 29/59 (49%)
Frame = +3
Query: 270 RIEIDYSSISGPNRISSHYAFLRLRKVAVDNFESS*GIIGMLKQQASYSGSWWHASSGH 446
+ + ++ + GP +S+H ++ + ++ + S + M+K + SG+++ H
Sbjct: 192 KYSLHHTRVGGPRTVSAHVGEVKKKATKINQMKKSLALHAMVKNELPNSGNFFFVKYPH 250
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,076,187
Number of Sequences: 27780
Number of extensions: 329834
Number of successful extensions: 928
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 866
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 918
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1655655746
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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