BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte4o10
(695 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC002740-1|AAH02740.2| 429|Homo sapiens TNFAIP3 interacting pro... 30 6.9
AL121750-5|CAM28233.1| 429|Homo sapiens TNFAIP3 interacting pro... 30 6.9
AL110117-1|CAM28252.1| 429|Homo sapiens TNFAIP3 interacting pro... 30 6.9
AK026176-1|BAB15382.1| 322|Homo sapiens protein ( Homo sapiens ... 30 6.9
AJ304866-1|CAC34835.1| 429|Homo sapiens A20-binding inhibitor o... 30 6.9
AF372839-1|AAM21315.1| 429|Homo sapiens fetal liver LKB1-intera... 30 6.9
AK125848-1|BAC86317.1| 1318|Homo sapiens protein ( Homo sapiens ... 30 9.1
>BC002740-1|AAH02740.2| 429|Homo sapiens TNFAIP3 interacting
protein 2 protein.
Length = 429
Score = 30.3 bits (65), Expect = 6.9
Identities = 13/35 (37%), Positives = 24/35 (68%)
Frame = +1
Query: 298 QLRDKQLPGELEYLQKELEKVKRKLKGEQS*CKQV 402
QLR Q+P E E ++KE+ ++ R+L+ + + C +V
Sbjct: 244 QLRGLQIPHEPELMRKEISRLNRQLEEKINDCAEV 278
>AL121750-5|CAM28233.1| 429|Homo sapiens TNFAIP3 interacting
protein 2 protein.
Length = 429
Score = 30.3 bits (65), Expect = 6.9
Identities = 13/35 (37%), Positives = 24/35 (68%)
Frame = +1
Query: 298 QLRDKQLPGELEYLQKELEKVKRKLKGEQS*CKQV 402
QLR Q+P E E ++KE+ ++ R+L+ + + C +V
Sbjct: 244 QLRGLQIPHEPELMRKEISRLNRQLEEKINDCAEV 278
>AL110117-1|CAM28252.1| 429|Homo sapiens TNFAIP3 interacting
protein 2 protein.
Length = 429
Score = 30.3 bits (65), Expect = 6.9
Identities = 13/35 (37%), Positives = 24/35 (68%)
Frame = +1
Query: 298 QLRDKQLPGELEYLQKELEKVKRKLKGEQS*CKQV 402
QLR Q+P E E ++KE+ ++ R+L+ + + C +V
Sbjct: 244 QLRGLQIPHEPELMRKEISRLNRQLEEKINDCAEV 278
>AK026176-1|BAB15382.1| 322|Homo sapiens protein ( Homo sapiens
cDNA: FLJ22523 fis, clone HRC12507. ).
Length = 322
Score = 30.3 bits (65), Expect = 6.9
Identities = 13/35 (37%), Positives = 24/35 (68%)
Frame = +1
Query: 298 QLRDKQLPGELEYLQKELEKVKRKLKGEQS*CKQV 402
QLR Q+P E E ++KE+ ++ R+L+ + + C +V
Sbjct: 137 QLRGLQIPHEPELMRKEISRLNRQLEEKINDCAEV 171
>AJ304866-1|CAC34835.1| 429|Homo sapiens A20-binding inhibitor of
NF-kappaB activation-2 protein.
Length = 429
Score = 30.3 bits (65), Expect = 6.9
Identities = 13/35 (37%), Positives = 24/35 (68%)
Frame = +1
Query: 298 QLRDKQLPGELEYLQKELEKVKRKLKGEQS*CKQV 402
QLR Q+P E E ++KE+ ++ R+L+ + + C +V
Sbjct: 244 QLRGLQIPHEPELMRKEISRLNRQLEEKINDCAEV 278
>AF372839-1|AAM21315.1| 429|Homo sapiens fetal liver
LKB1-interacting protein protein.
Length = 429
Score = 30.3 bits (65), Expect = 6.9
Identities = 13/35 (37%), Positives = 24/35 (68%)
Frame = +1
Query: 298 QLRDKQLPGELEYLQKELEKVKRKLKGEQS*CKQV 402
QLR Q+P E E ++KE+ ++ R+L+ + + C +V
Sbjct: 244 QLRGLQIPHEPELMRKEISRLNRQLEEKINDCAEV 278
>AK125848-1|BAC86317.1| 1318|Homo sapiens protein ( Homo sapiens
cDNA FLJ43860 fis, clone TESTI4007404. ).
Length = 1318
Score = 29.9 bits (64), Expect = 9.1
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +3
Query: 588 FFTEKWDKTWKESFPRRSIVLLGAWKRS*G 677
F WD+T K+SF +++L+GA RS G
Sbjct: 409 FHYSSWDETLKQSFLTATLMLMGAVSRSEG 438
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 83,726,296
Number of Sequences: 237096
Number of extensions: 1575515
Number of successful extensions: 2927
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2812
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2920
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8007229802
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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