Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte4o04
(709 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U61949-2|AAB03152.1| 884|Caenorhabditis elegans Puromycin-sensi... 46 4e-05
U61949-1|AAY44009.1| 948|Caenorhabditis elegans Puromycin-sensi... 46 4e-05
Z81543-6|CAB04428.2| 1082|Caenorhabditis elegans Hypothetical pr... 38 0.005
AL132876-39|CAL49440.1| 1082|Caenorhabditis elegans Hypothetical... 38 0.005
Z71177-6|CAA94872.2| 1090|Caenorhabditis elegans Hypothetical pr... 38 0.009
Z69794-3|CAA93680.1| 747|Caenorhabditis elegans Hypothetical pr... 36 0.021
Z69794-2|CAA93681.1| 786|Caenorhabditis elegans Hypothetical pr... 36 0.028
CU457741-13|CAM36354.1| 608|Caenorhabditis elegans Hypothetical... 33 0.26
CU457741-12|CAM36353.1| 157|Caenorhabditis elegans Hypothetical... 33 0.26
CU457741-11|CAM36352.1| 609|Caenorhabditis elegans Hypothetical... 33 0.26
AF068201-1|AAC70927.1| 609|Caenorhabditis elegans aminopeptidas... 33 0.26
AF068200-1|AAC72891.1| 609|Caenorhabditis elegans aminopeptidas... 33 0.26
AF025461-3|AAB70998.3| 632|Caenorhabditis elegans Hypothetical ... 29 3.3
AF025461-2|ABC71819.1| 670|Caenorhabditis elegans Hypothetical ... 29 3.3
AL032625-4|CAB63350.2| 792|Caenorhabditis elegans Hypothetical ... 29 4.3
Z30317-5|CAA82971.4| 1890|Caenorhabditis elegans Hypothetical pr... 28 5.7
L14324-6|AAA28182.1| 3343|Caenorhabditis elegans Cadherin family... 28 5.7
AL132862-26|CAB60561.1| 874|Caenorhabditis elegans Hypothetical... 27 9.9
>U61949-2|AAB03152.1| 884|Caenorhabditis elegans
Puromycin-sensitive aminopeptidaseprotein 1, isoform a
protein.
Length = 884
Score = 45.6 bits (103), Expect = 4e-05
Identities = 23/73 (31%), Positives = 40/73 (54%)
Frame = +1
Query: 382 FQRLPNNVIPKHYALELIPNLEKFTFKGKTAVKVSIVNPTNVIVLNSLDLDLKNVKLQYN 561
F+RLP P HY + L P L +F+F G + V+I T+V+ +++ L +++V L
Sbjct: 13 FERLPTFAEPTHYNVRLSPCLNQFSFDGHATIDVTIKEATDVLKVHAQSLLIQSVSLITQ 72
Query: 562 DGSNSAIIPSSVE 600
G S + +S +
Sbjct: 73 PGDASKSLETSYD 85
>U61949-1|AAY44009.1| 948|Caenorhabditis elegans
Puromycin-sensitive aminopeptidaseprotein 1, isoform b
protein.
Length = 948
Score = 45.6 bits (103), Expect = 4e-05
Identities = 23/73 (31%), Positives = 40/73 (54%)
Frame = +1
Query: 382 FQRLPNNVIPKHYALELIPNLEKFTFKGKTAVKVSIVNPTNVIVLNSLDLDLKNVKLQYN 561
F+RLP P HY + L P L +F+F G + V+I T+V+ +++ L +++V L
Sbjct: 77 FERLPTFAEPTHYNVRLSPCLNQFSFDGHATIDVTIKEATDVLKVHAQSLLIQSVSLITQ 136
Query: 562 DGSNSAIIPSSVE 600
G S + +S +
Sbjct: 137 PGDASKSLETSYD 149
>Z81543-6|CAB04428.2| 1082|Caenorhabditis elegans Hypothetical
protein F49B2.6 protein.
Length = 1082
Score = 38.3 bits (85), Expect = 0.005
Identities = 17/52 (32%), Positives = 30/52 (57%)
Frame = +1
Query: 388 RLPNNVIPKHYALELIPNLEKFTFKGKTAVKVSIVNPTNVIVLNSLDLDLKN 543
RLP P Y L L PNL + ++++ I N T +++LN+ +L++K+
Sbjct: 199 RLPRTAEPIDYDLTLHPNLTNGEVEASVSIRILIKNDTKLLILNAENLEMKS 250
>AL132876-39|CAL49440.1| 1082|Caenorhabditis elegans Hypothetical
protein F49B2.6 protein.
Length = 1082
Score = 38.3 bits (85), Expect = 0.005
Identities = 17/52 (32%), Positives = 30/52 (57%)
Frame = +1
Query: 388 RLPNNVIPKHYALELIPNLEKFTFKGKTAVKVSIVNPTNVIVLNSLDLDLKN 543
RLP P Y L L PNL + ++++ I N T +++LN+ +L++K+
Sbjct: 199 RLPRTAEPIDYDLTLHPNLTNGEVEASVSIRILIKNDTKLLILNAENLEMKS 250
>Z71177-6|CAA94872.2| 1090|Caenorhabditis elegans Hypothetical
protein AC3.5 protein.
Length = 1090
Score = 37.5 bits (83), Expect = 0.009
Identities = 20/48 (41%), Positives = 27/48 (56%)
Frame = +1
Query: 391 LPNNVIPKHYALELIPNLEKFTFKGKTAVKVSIVNPTNVIVLNSLDLD 534
LP NV P Y + L P + G VK++I PTN IVLN+ D++
Sbjct: 156 LPKNVQPVWYDVSLSPKVGGNGTMGLAHVKLNIEEPTNKIVLNAKDIE 203
>Z69794-3|CAA93680.1| 747|Caenorhabditis elegans Hypothetical
protein R03G8.6 protein.
Length = 747
Score = 36.3 bits (80), Expect = 0.021
Identities = 28/113 (24%), Positives = 55/113 (48%), Gaps = 10/113 (8%)
Frame = +1
Query: 388 RLPNNVIPKHYALEL---IPNL------EKFTFKGKTAVKVSIVNPTNVIVLNSLDLDLK 540
RLP +V P HY + + +P K TF+G + + I T+ +VL+S L++
Sbjct: 31 RLPRHVSPSHYDIHIKTYLPGYGWKADENKITFEGNVNILLDIKETTDKLVLHSSSLNII 90
Query: 541 NVKLQYNDGSNSAIIPSSVELSTTDETASIYFSESL-LEGEATLYSEFTGEIK 696
+ Q +D N +I S + T + + Y + ++ ++ A + F G+++
Sbjct: 91 SATFQ-SDEQNVSI--SHWNVQTESQFLTFYLNNTVKVQSSAGIQINFQGKVR 140
>Z69794-2|CAA93681.1| 786|Caenorhabditis elegans Hypothetical
protein R03G8.4 protein.
Length = 786
Score = 35.9 bits (79), Expect = 0.028
Identities = 23/74 (31%), Positives = 35/74 (47%), Gaps = 9/74 (12%)
Frame = +1
Query: 358 VTMPENKPFQRLPNNVIPKHYALELIPNL---------EKFTFKGKTAVKVSIVNPTNVI 510
VT + RLP NV P Y L + L + FTF G +++ + T+ I
Sbjct: 21 VTQETDDTNYRLPRNVFPTEYRLHITTFLPGYKWEADEKSFTFIGDVKIQIEVKEETDTI 80
Query: 511 VLNSLDLDLKNVKL 552
VL++ L++ NV L
Sbjct: 81 VLHTDSLNINNVLL 94
>CU457741-13|CAM36354.1| 608|Caenorhabditis elegans Hypothetical
protein C42C1.11c protein.
Length = 608
Score = 32.7 bits (71), Expect = 0.26
Identities = 17/53 (32%), Positives = 28/53 (52%)
Frame = +1
Query: 403 VIPKHYALELIPNLEKFTFKGKTAVKVSIVNPTNVIVLNSLDLDLKNVKLQYN 561
V HYAL+ + EK G ++ + + T IVL++ DL +++V L N
Sbjct: 18 VTVSHYALKWKVDFEKKHIAGDVSITLDVKQDTERIVLDTRDLSVQSVALNLN 70
>CU457741-12|CAM36353.1| 157|Caenorhabditis elegans Hypothetical
protein C42C1.11b protein.
Length = 157
Score = 32.7 bits (71), Expect = 0.26
Identities = 17/53 (32%), Positives = 28/53 (52%)
Frame = +1
Query: 403 VIPKHYALELIPNLEKFTFKGKTAVKVSIVNPTNVIVLNSLDLDLKNVKLQYN 561
V HYAL+ + EK G ++ + + T IVL++ DL +++V L N
Sbjct: 18 VTVSHYALKWKVDFEKKHIAGDVSITLDVKQDTERIVLDTRDLSVQSVALNLN 70
>CU457741-11|CAM36352.1| 609|Caenorhabditis elegans Hypothetical
protein C42C1.11a protein.
Length = 609
Score = 32.7 bits (71), Expect = 0.26
Identities = 17/53 (32%), Positives = 28/53 (52%)
Frame = +1
Query: 403 VIPKHYALELIPNLEKFTFKGKTAVKVSIVNPTNVIVLNSLDLDLKNVKLQYN 561
V HYAL+ + EK G ++ + + T IVL++ DL +++V L N
Sbjct: 18 VTVSHYALKWKVDFEKKHIAGDVSITLDVKQDTERIVLDTRDLSVQSVALNLN 70
>AF068201-1|AAC70927.1| 609|Caenorhabditis elegans aminopeptidase-1
protein.
Length = 609
Score = 32.7 bits (71), Expect = 0.26
Identities = 17/53 (32%), Positives = 28/53 (52%)
Frame = +1
Query: 403 VIPKHYALELIPNLEKFTFKGKTAVKVSIVNPTNVIVLNSLDLDLKNVKLQYN 561
V HYAL+ + EK G ++ + + T IVL++ DL +++V L N
Sbjct: 18 VTVSHYALKWKVDFEKKHIAGDVSITLDVKQDTERIVLDTRDLSVQSVALNLN 70
>AF068200-1|AAC72891.1| 609|Caenorhabditis elegans aminopeptidase-1
protein.
Length = 609
Score = 32.7 bits (71), Expect = 0.26
Identities = 17/53 (32%), Positives = 28/53 (52%)
Frame = +1
Query: 403 VIPKHYALELIPNLEKFTFKGKTAVKVSIVNPTNVIVLNSLDLDLKNVKLQYN 561
V HYAL+ + EK G ++ + + T IVL++ DL +++V L N
Sbjct: 18 VTVSHYALKWKVDFEKKHIAGDVSITLDVKQDTERIVLDTRDLSVQSVALNLN 70
>AF025461-3|AAB70998.3| 632|Caenorhabditis elegans Hypothetical
protein M01D1.2a protein.
Length = 632
Score = 29.1 bits (62), Expect = 3.3
Identities = 14/55 (25%), Positives = 23/55 (41%)
Frame = +1
Query: 316 IYTARPTLAISKEKVTMPENKPFQRLPNNVIPKHYALELIPNLEKFTFKGKTAVK 480
++T L+ + +P PF N+ KH+ PNLE T T ++
Sbjct: 107 LFTLEDLLSCGSSCIKIPNTSPFTDKDFNLFMKHWIRGSNPNLEYLTINATTDLR 161
>AF025461-2|ABC71819.1| 670|Caenorhabditis elegans Hypothetical
protein M01D1.2b protein.
Length = 670
Score = 29.1 bits (62), Expect = 3.3
Identities = 14/55 (25%), Positives = 23/55 (41%)
Frame = +1
Query: 316 IYTARPTLAISKEKVTMPENKPFQRLPNNVIPKHYALELIPNLEKFTFKGKTAVK 480
++T L+ + +P PF N+ KH+ PNLE T T ++
Sbjct: 107 LFTLEDLLSCGSSCIKIPNTSPFTDKDFNLFMKHWIRGSNPNLEYLTINATTDLR 161
>AL032625-4|CAB63350.2| 792|Caenorhabditis elegans Hypothetical
protein Y37H9A.3 protein.
Length = 792
Score = 28.7 bits (61), Expect = 4.3
Identities = 19/83 (22%), Positives = 41/83 (49%), Gaps = 1/83 (1%)
Frame = +1
Query: 406 IPK-HYALELIPNLEKFTFKGKTAVKVSIVNPTNVIVLNSLDLDLKNVKLQYNDGSNSAI 582
+PK HY + IP+ + F ++++IV+ +V + + + N+ ++Y +
Sbjct: 611 VPKFHYEMRQIPSADLFPDLADDVIELTIVSCRDVPLPSGYETHHANLFIKYTFPAVVND 670
Query: 583 IPSSVELSTTDETASIYFSESLL 651
+P + + TAS F ES++
Sbjct: 671 LPQTGKTKLIAGTASPDFGESIM 693
>Z30317-5|CAA82971.4| 1890|Caenorhabditis elegans Hypothetical
protein T16G12.1 protein.
Length = 1890
Score = 28.3 bits (60), Expect = 5.7
Identities = 16/72 (22%), Positives = 39/72 (54%)
Frame = +1
Query: 445 EKFTFKGKTAVKVSIVNPTNVIVLNSLDLDLKNVKLQYNDGSNSAIIPSSVELSTTDETA 624
+ FTF G+ +++V + ++ +LN+ + +++ K+ DG+ I S + TT + +
Sbjct: 109 KNFTFDGRASIQVEALVASDRFILNAYNFKIQSYKVVDIDGTVVPINSISQD-DTTQQLS 167
Query: 625 SIYFSESLLEGE 660
I + ++ G+
Sbjct: 168 LITNANGVVAGQ 179
>L14324-6|AAA28182.1| 3343|Caenorhabditis elegans Cadherin family
protein 3 protein.
Length = 3343
Score = 28.3 bits (60), Expect = 5.7
Identities = 18/42 (42%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Frame = +1
Query: 439 NLEKFTFKGKTAVKVSIVNPTNVIV-LNSLDLDLKNVKLQYN 561
N+ KF + TA N T IV N D+D+KN KLQY+
Sbjct: 734 NVPKFGSRYYTATISGKSNETVAIVQANDNDVDVKNQKLQYH 775
>AL132862-26|CAB60561.1| 874|Caenorhabditis elegans Hypothetical
protein Y73F8A.33 protein.
Length = 874
Score = 27.5 bits (58), Expect = 9.9
Identities = 11/39 (28%), Positives = 20/39 (51%)
Frame = -2
Query: 480 FHRSFSLESKFFQIWNQFQCIMLRNHIIRKSLKRLVLWH 364
FH + + + WN + C+ L+NH K+ + +WH
Sbjct: 375 FHPQYFMSDEAHAFWNGYNCV-LKNH---KTQRLWCIWH 409
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,764,534
Number of Sequences: 27780
Number of extensions: 297990
Number of successful extensions: 945
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 828
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 945
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1645110168
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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