Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte4n24
         (573 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY579078-1|AAT81602.1|  425|Anopheles gambiae neuropeptide F rec...    25   2.3  
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            23   7.1  
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         23   7.1  

>AY579078-1|AAT81602.1|  425|Anopheles gambiae neuropeptide F
           receptor protein.
          Length = 425

 Score = 24.6 bits (51), Expect = 2.3
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +1

Query: 466 EYTPNCIPEWTIAYFKV 516
           EY   CI +W IAY +V
Sbjct: 195 EYVSYCIEDWPIAYGRV 211


>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 23.0 bits (47), Expect = 7.1
 Identities = 10/33 (30%), Positives = 19/33 (57%)
 Frame = +2

Query: 224  RKQLD*VYCVNWIVTGVTSNVRYWHLNMRTFKY 322
            ++ L  VY +N + T  + +  Y + N+R+ KY
Sbjct: 2041 KRVLKKVYVINTLNTSYSIDYEYENDNLRSIKY 2073


>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 23.0 bits (47), Expect = 7.1
 Identities = 14/51 (27%), Positives = 27/51 (52%)
 Frame = +1

Query: 85  KIVYCVK*NVEDTAIKKQHYCHGRKAISRVTQVISDGQFSELNGLLTKAAR 237
           +I+YC   NVE   ++K ++  G    +++  V  D +  +L+GLL    +
Sbjct: 436 RILYCFCRNVECKELEKSYHTFG----AQIADV--DERIKQLDGLLASVRK 480


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 597,130
Number of Sequences: 2352
Number of extensions: 11609
Number of successful extensions: 58
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 58
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 58
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 54245403
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)