Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte4n24
         (573 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z83223-6|CAB05719.1|  884|Caenorhabditis elegans Hypothetical pr...    29   1.8  
Z81538-6|CAB04387.1|  884|Caenorhabditis elegans Hypothetical pr...    29   1.8  
AC006644-6|AAZ91358.1|  958|Caenorhabditis elegans Hypothetical ...    28   4.1  
U41010-4|AAV28333.1| 1622|Caenorhabditis elegans Hypothetical pr...    28   5.4  
Z31590-4|CAD27606.1|  495|Caenorhabditis elegans Hypothetical pr...    27   7.2  
Z31590-3|CAD27605.1|  607|Caenorhabditis elegans Hypothetical pr...    27   7.2  
Z31590-2|CAD27604.1|  538|Caenorhabditis elegans Hypothetical pr...    27   7.2  
Z31590-1|CAA83461.1|  605|Caenorhabditis elegans Hypothetical pr...    27   7.2  
Z75711-3|CAB00035.3| 1204|Caenorhabditis elegans Hypothetical pr...    27   9.5  
AL034393-16|CAA22331.2|  286|Caenorhabditis elegans Hypothetical...    27   9.5  

>Z83223-6|CAB05719.1|  884|Caenorhabditis elegans Hypothetical
           protein E01G4.6 protein.
          Length = 884

 Score = 29.5 bits (63), Expect = 1.8
 Identities = 18/51 (35%), Positives = 29/51 (56%)
 Frame = +1

Query: 157 KAISRVTQVISDGQFSELNGLLTKAARLSLLRELDRNWSNKQRSLLALKHE 309
           K +S+   +IS+G+FSEL   L +  +L+L  + D   S+K   L  L +E
Sbjct: 355 KDLSKYVTLISEGKFSELFE-LAEQKKLTLTSKFDEKLSSKMAKLKDLINE 404


>Z81538-6|CAB04387.1|  884|Caenorhabditis elegans Hypothetical
           protein E01G4.6 protein.
          Length = 884

 Score = 29.5 bits (63), Expect = 1.8
 Identities = 18/51 (35%), Positives = 29/51 (56%)
 Frame = +1

Query: 157 KAISRVTQVISDGQFSELNGLLTKAARLSLLRELDRNWSNKQRSLLALKHE 309
           K +S+   +IS+G+FSEL   L +  +L+L  + D   S+K   L  L +E
Sbjct: 355 KDLSKYVTLISEGKFSELFE-LAEQKKLTLTSKFDEKLSSKMAKLKDLINE 404


>AC006644-6|AAZ91358.1|  958|Caenorhabditis elegans Hypothetical
           protein F55A3.1 protein.
          Length = 958

 Score = 28.3 bits (60), Expect = 4.1
 Identities = 16/43 (37%), Positives = 23/43 (53%)
 Frame = -1

Query: 129 YSCIFNILFHTINNFPFC*MIIQN*M*KTEILKVKYSHLVYIC 1
           Y+CIF + FH I N PF   + +      +ILK     LV++C
Sbjct: 156 YNCIFYLSFHDIVNAPF--QLFKAEHFFNDILKGSLLLLVFVC 196


>U41010-4|AAV28333.1| 1622|Caenorhabditis elegans Hypothetical protein
            T05A12.4a protein.
          Length = 1622

 Score = 27.9 bits (59), Expect = 5.4
 Identities = 14/48 (29%), Positives = 20/48 (41%)
 Frame = +3

Query: 78   KMENCLLCEIKC*RYSYKKAALLPWAQGNITGYTSYKRWSVLRIERFA 221
            K  +CL+C+  C  YS+K  A      G     +    W+V     FA
Sbjct: 1177 KEHSCLICDFWCKTYSFKFDAGFSTYHGLSRNKSGVAEWAVYLANHFA 1224


>Z31590-4|CAD27606.1|  495|Caenorhabditis elegans Hypothetical
           protein R01H10.3d protein.
          Length = 495

 Score = 27.5 bits (58), Expect = 7.2
 Identities = 10/17 (58%), Positives = 12/17 (70%)
 Frame = -1

Query: 450 EYFGEQQNVNTIDWHPL 400
           E  G Q+ VNTI WHP+
Sbjct: 124 ELTGHQKRVNTIAWHPV 140


>Z31590-3|CAD27605.1|  607|Caenorhabditis elegans Hypothetical
           protein R01H10.3c protein.
          Length = 607

 Score = 27.5 bits (58), Expect = 7.2
 Identities = 10/17 (58%), Positives = 12/17 (70%)
 Frame = -1

Query: 450 EYFGEQQNVNTIDWHPL 400
           E  G Q+ VNTI WHP+
Sbjct: 124 ELTGHQKRVNTIAWHPV 140


>Z31590-2|CAD27604.1|  538|Caenorhabditis elegans Hypothetical
           protein R01H10.3b protein.
          Length = 538

 Score = 27.5 bits (58), Expect = 7.2
 Identities = 10/17 (58%), Positives = 12/17 (70%)
 Frame = -1

Query: 450 EYFGEQQNVNTIDWHPL 400
           E  G Q+ VNTI WHP+
Sbjct: 124 ELTGHQKRVNTIAWHPV 140


>Z31590-1|CAA83461.1|  605|Caenorhabditis elegans Hypothetical
           protein R01H10.3a protein.
          Length = 605

 Score = 27.5 bits (58), Expect = 7.2
 Identities = 10/17 (58%), Positives = 12/17 (70%)
 Frame = -1

Query: 450 EYFGEQQNVNTIDWHPL 400
           E  G Q+ VNTI WHP+
Sbjct: 124 ELTGHQKRVNTIAWHPV 140


>Z75711-3|CAB00035.3| 1204|Caenorhabditis elegans Hypothetical
           protein K02B12.5 protein.
          Length = 1204

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 14/26 (53%), Positives = 16/26 (61%)
 Frame = +1

Query: 199 FSELNGLLTKAARLSLLRELDRNWSN 276
           F+ELNG   K  RL   REL  NW+N
Sbjct: 423 FNELNG---KILRLDTKRELYENWAN 445


>AL034393-16|CAA22331.2|  286|Caenorhabditis elegans Hypothetical
           protein Y18D10A.21 protein.
          Length = 286

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 11/36 (30%), Positives = 21/36 (58%)
 Frame = +1

Query: 247 LRELDRNWSNKQRSLLALKHEDIQISSPRKVYFIRI 354
           + +LDRN+       LA++HE   I   +KV+ +++
Sbjct: 163 IHKLDRNYYGHWEVKLAVEHETDDIKDRKKVFAVKL 198


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,785,208
Number of Sequences: 27780
Number of extensions: 257963
Number of successful extensions: 619
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 613
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 619
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1184216096
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)