Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte4n21
         (797 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.    29   0.22 
AF164152-1|AAD47076.1|  261|Anopheles gambiae ribosomal protein ...    26   1.6  
AJ439353-11|CAD27933.1|  615|Anopheles gambiae 30E5.11 protein.        25   2.0  
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    25   2.7  
AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcript...    25   3.6  
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript...    25   3.6  
AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein ...    24   4.7  
CR954256-8|CAJ14149.1|  247|Anopheles gambiae putative signal pe...    23   8.3  

>AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.
          Length = 1201

 Score = 28.7 bits (61), Expect = 0.22
 Identities = 26/100 (26%), Positives = 42/100 (42%), Gaps = 9/100 (9%)
 Frame = +2

Query: 323  EIKRRELERLRHLATKQFELTNDLHVNMGKVPSSEHLDHTNAHTFEIEDLKKLIMKTTSD 502
            E+ + +LE L  L    F   ++L   + ++   +          E+   +K I K  +D
Sbjct: 822  EVTKNKLENL--LTNNLFRRKDELVQALQEISVEDRKRQLTNCRNEVVATEKRIKKVLTD 879

Query: 503  LEAADKKRREEFKTYE---------IQKEFEKHQKMEEMG 595
             E  D+K  E  K  +         IQKE E  +K+EE G
Sbjct: 880  TEEVDRKLSEALKQQKTLQKELESWIQKEKEAQEKLEEDG 919


>AF164152-1|AAD47076.1|  261|Anopheles gambiae ribosomal protein L8
           protein.
          Length = 261

 Score = 25.8 bits (54), Expect = 1.6
 Identities = 14/43 (32%), Positives = 22/43 (51%)
 Frame = +2

Query: 158 EYMEYHRYLKEVVQALESDPDFRERLEKADEEDVKSGKIAEQL 286
           +Y E H YLK VV+ +  DP     L   +  D    ++++QL
Sbjct: 33  DYAERHGYLKGVVKQIIQDPGRGAPLAVVNFRDPYRFRLSKQL 75


>AJ439353-11|CAD27933.1|  615|Anopheles gambiae 30E5.11 protein.
          Length = 615

 Score = 25.4 bits (53), Expect = 2.0
 Identities = 21/79 (26%), Positives = 36/79 (45%), Gaps = 1/79 (1%)
 Frame = +2

Query: 110 VTPDKSEDSEIKDDLEEYMEYHRY-LKEVVQALESDPDFRERLEKADEEDVKSGKIAEQL 286
           V+P + E   +     E+ EY R   K++    E+    +   +K + E ++  K   + 
Sbjct: 91  VSPAEKETEVLCQQEREFREYLRNGSKKMTSTWENT--VQNIRDKKEAERLRRDKAKVEE 148

Query: 287 DFVNHNVRTRLDEIKRREL 343
           D  ++      DEIKRREL
Sbjct: 149 DQRHYRELKAADEIKRREL 167


>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
           channel alpha subunitprotein.
          Length = 2139

 Score = 25.0 bits (52), Expect = 2.7
 Identities = 14/58 (24%), Positives = 28/58 (48%)
 Frame = +2

Query: 356 HLATKQFELTNDLHVNMGKVPSSEHLDHTNAHTFEIEDLKKLIMKTTSDLEAADKKRR 529
           H   + F+LT D   + GK+  +++     A T  + D+K +++      +AA +  R
Sbjct: 690 HKGQRDFDLTQDCTDDAGKIKHNDNPFIEPAQTQTVVDMKDVMVLNDIIEQAAGRHSR 747


>AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1209

 Score = 24.6 bits (51), Expect = 3.6
 Identities = 13/39 (33%), Positives = 18/39 (46%)
 Frame = +2

Query: 359 LATKQFELTNDLHVNMGKVPSSEHLDHTNAHTFEIEDLK 475
           LA      T +   N G +  SE +     HTF ++DLK
Sbjct: 680 LAMNPLSRTLNQQCNFGYLLKSEEISTRITHTFFMDDLK 718


>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1248

 Score = 24.6 bits (51), Expect = 3.6
 Identities = 13/48 (27%), Positives = 24/48 (50%)
 Frame = +2

Query: 323  EIKRRELERLRHLATKQFELTNDLHVNMGKVPSSEHLDHTNAHTFEIE 466
            E +RRE+ER R    ++   +  + ++   +PS E  +  +  T E E
Sbjct: 1190 ERRRREMERTRRQRQRRARDSQAITIHFSPLPSDEIQERRSTLTAEEE 1237


>AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein
           protein.
          Length = 596

 Score = 24.2 bits (50), Expect = 4.7
 Identities = 11/19 (57%), Positives = 12/19 (63%)
 Frame = +1

Query: 583 GRNGRQ*RIFGENKGRGRG 639
           GR GR  R  G  +GRGRG
Sbjct: 68  GRGGRGGRGGGRGRGRGRG 86


>CR954256-8|CAJ14149.1|  247|Anopheles gambiae putative signal
           peptidase protein.
          Length = 247

 Score = 23.4 bits (48), Expect = 8.3
 Identities = 12/35 (34%), Positives = 19/35 (54%)
 Frame = +2

Query: 203 LESDPDFRERLEKADEEDVKSGKIAEQLDFVNHNV 307
           LE D D      KA +      K+ E++D+V+H+V
Sbjct: 122 LELDADGHLPRAKAQQHYEAMVKLREKVDYVSHSV 156


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 689,177
Number of Sequences: 2352
Number of extensions: 12108
Number of successful extensions: 27
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 83992206
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)