Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte4n19
         (411 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_01_0050 + 853712-855368,855440-856113                               27   4.4  
01_01_0680 + 5217633-5219072                                           27   4.4  
04_04_0915 - 29385926-29385952,29386069-29386285,29386367-293866...    27   5.8  
11_01_0466 + 3607947-3610608,3610725-3611018,3611494-3611895,361...    27   7.7  
09_03_0218 + 13539481-13540082,13540171-13540276,13540645-135409...    27   7.7  

>09_01_0050 + 853712-855368,855440-856113
          Length = 776

 Score = 27.5 bits (58), Expect = 4.4
 Identities = 15/43 (34%), Positives = 24/43 (55%)
 Frame = -2

Query: 263 LLANRLTTSANSLPIISTIDLFPNHISIALLDSHFEGL*SLGG 135
           L A  L  +A S PI + + L PN  +++L ++ F G   +GG
Sbjct: 151 LRALNLAGNALSGPIPANLTLLPNLTAVSLANNFFSGALPVGG 193


>01_01_0680 + 5217633-5219072
          Length = 479

 Score = 27.5 bits (58), Expect = 4.4
 Identities = 13/30 (43%), Positives = 18/30 (60%)
 Frame = -2

Query: 266 RLLANRLTTSANSLPIISTIDLFPNHISIA 177
           RL+ N  + +   +PI  T+  FPNH SIA
Sbjct: 115 RLIGNGTSAATGLVPIFPTLT-FPNHYSIA 143


>04_04_0915 -
           29385926-29385952,29386069-29386285,29386367-29386622,
           29386745-29387072,29387157-29387587,29388014-29388163,
           29388212-29388398,29388709-29388750,29389007-29389555,
           29389778-29390032
          Length = 813

 Score = 27.1 bits (57), Expect = 5.8
 Identities = 16/54 (29%), Positives = 28/54 (51%)
 Frame = +1

Query: 157 SKWLSNSAMDMWFGNKSIVEIIGREFADVVNRFASRRARDVLIQKYSNQESTIN 318
           SK+    A+ + F  K + E +    + +  RFA+R A D+ ++KY    S +N
Sbjct: 267 SKFQLPIALTVAFATKEVDEAMSSS-SQLSQRFAARSAVDLNLEKYMLNNSQLN 319


>11_01_0466 + 3607947-3610608,3610725-3611018,3611494-3611895,
            3611984-3612217,3614113-3614138,3614446-3614633,
            3615707-3617670,3617938-3618423,3618527-3618894
          Length = 2207

 Score = 26.6 bits (56), Expect = 7.7
 Identities = 14/37 (37%), Positives = 19/37 (51%)
 Frame = +3

Query: 81   TAHYNSFGKSES*DRNISSSKGLQTFEMAVQQRYGYV 191
            TAH   FG S     +++SS G  T  +A+    GYV
Sbjct: 2047 TAHVRDFGLSRFEIYSMTSSFGCSTSSVAISGTIGYV 2083


>09_03_0218 +
           13539481-13540082,13540171-13540276,13540645-13540960,
           13541187-13541263,13541269-13541895,13542783-13543112,
           13543442-13543747,13543824-13543896,13544004-13544089,
           13544219-13544396,13545311-13545756
          Length = 1048

 Score = 26.6 bits (56), Expect = 7.7
 Identities = 9/15 (60%), Positives = 12/15 (80%)
 Frame = -3

Query: 169 TAISKVCNPLEDEMF 125
           +A+ KVCNP+ DE F
Sbjct: 784 SAVQKVCNPVHDETF 798


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.315    0.128    0.367 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,475,033
Number of Sequences: 37544
Number of extensions: 169828
Number of successful extensions: 396
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 387
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 396
length of database: 14,793,348
effective HSP length: 75
effective length of database: 11,977,548
effective search space used: 730630428
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)