Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte4n19
         (411 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z82286-4|CAB05310.1|  468|Caenorhabditis elegans Hypothetical pr...    28   3.0  
Z81105-2|CAB03216.1|  305|Caenorhabditis elegans Hypothetical pr...    27   4.0  

>Z82286-4|CAB05310.1|  468|Caenorhabditis elegans Hypothetical
           protein W02A2.7 protein.
          Length = 468

 Score = 27.9 bits (59), Expect = 3.0
 Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 3/39 (7%)
 Frame = -1

Query: 249 IDDVSKFSTNNFND*FIS---EPHIHSAVGQPFRRSVIP 142
           ID++SK + +N ND  +S   E H H   G+ F R   P
Sbjct: 221 IDEISKITLDNHNDDTMSAEKENHFHEHRGEKFGRRGFP 259


>Z81105-2|CAB03216.1|  305|Caenorhabditis elegans Hypothetical
           protein R05D7.2 protein.
          Length = 305

 Score = 27.5 bits (58), Expect = 4.0
 Identities = 11/21 (52%), Positives = 14/21 (66%)
 Frame = +3

Query: 348 LRININTYLGNFNRICKYKKK 410
           L+I+ N  L   +RICKYK K
Sbjct: 98  LQIHANVQLDEMSRICKYKSK 118


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.315    0.128    0.367 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,851,129
Number of Sequences: 27780
Number of extensions: 173006
Number of successful extensions: 362
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 354
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 362
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 662437636
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)