Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte4m24
         (587 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory pro...    25   0.36 
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    24   1.1  
AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory recept...    24   1.1  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    23   1.4  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    23   2.5  
AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase prot...    21   5.8  

>DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory
          protein 6 protein.
          Length = 251

 Score = 25.4 bits (53), Expect = 0.36
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = -1

Query: 68 VINEKRMINYYRRC 27
          ++N +RM+NYY  C
Sbjct: 33 ILNNRRMVNYYAAC 46


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 23.8 bits (49), Expect = 1.1
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = +1

Query: 178 TFSNEEPRFRPSIISFC 228
           TF+ +  +FRPS + FC
Sbjct: 304 TFTPDRSKFRPSSLRFC 320


>AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory receptor
           candidate 24 protein.
          Length = 384

 Score = 23.8 bits (49), Expect = 1.1
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = +1

Query: 178 TFSNEEPRFRPSIISFC 228
           TF+ +  +FRPS + FC
Sbjct: 29  TFTPDRSKFRPSSLRFC 45


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = +1

Query: 238 RKIIGLARTCDNSTC 282
           RK++ L + C+N TC
Sbjct: 147 RKVVPLKKLCNNGTC 161


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 15/60 (25%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
 Frame = +3

Query: 396 YLSRTIRMIDW-HKWRYRKMLRSYLIISLMEALNNGPF*SFFACDLLKVGCVILIINVKS 572
           +LS    +++  ++  Y ++ ++    +L+ AL       F  C+LL  G   ++INV S
Sbjct: 381 FLSEIFGLVNLKYRETYFRLSKTKTFCTLVTALVYCSLAIFVLCELLIEGTTSILINVPS 440


>AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase
           protein.
          Length = 590

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 10/36 (27%), Positives = 18/36 (50%)
 Frame = +2

Query: 95  FTAIVSSCDAISLEARSLTAKLPASTTVHFQTRSHD 202
           FT+  S+C   S+    ++A++ A    HF+    D
Sbjct: 143 FTSRTSACGLFSVCYPRVSAQMKADLRSHFRALCQD 178


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 121,722
Number of Sequences: 336
Number of extensions: 2357
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14726181
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)