Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte4m17
         (164 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U50468-1|AAA93472.1|   91|Anopheles gambiae protein ( Anopheles ...    23   1.3  
DQ974161-1|ABJ52801.1|  409|Anopheles gambiae serpin 2 protein.        23   1.8  
DQ342048-1|ABC69940.1|  847|Anopheles gambiae STIP protein.            20   9.4  
AJ297931-1|CAC35451.1|  166|Anopheles gambiae hypothetical prote...    20   9.4  

>U50468-1|AAA93472.1|   91|Anopheles gambiae protein ( Anopheles
           gambiae putativetubulin alpha chain mRNA, complete cds.
           ).
          Length = 91

 Score = 23.0 bits (47), Expect = 1.3
 Identities = 9/22 (40%), Positives = 11/22 (50%)
 Frame = +3

Query: 93  MREIXHIQAGXCGNQIGXXFWE 158
           MRE   +  G  G QIG   W+
Sbjct: 1   MRECISVHVGQAGVQIGNPCWD 22


>DQ974161-1|ABJ52801.1|  409|Anopheles gambiae serpin 2 protein.
          Length = 409

 Score = 22.6 bits (46), Expect = 1.8
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = -1

Query: 74  TINYLXLKICSRTLHSLSWSLEE 6
           T+N +  +I S +LH   W +EE
Sbjct: 268 TVNQVLDRINSASLHQALWYMEE 290


>DQ342048-1|ABC69940.1|  847|Anopheles gambiae STIP protein.
          Length = 847

 Score = 20.2 bits (40), Expect = 9.4
 Identities = 10/26 (38%), Positives = 11/26 (42%)
 Frame = -2

Query: 148 LXPIWLPX*PAWICXISLIMFYLXEL 71
           L   W P  PAWI    L    L +L
Sbjct: 525 LLDAWAPLLPAWILDNVLEQIVLVKL 550


>AJ297931-1|CAC35451.1|  166|Anopheles gambiae hypothetical protein
           protein.
          Length = 166

 Score = 20.2 bits (40), Expect = 9.4
 Identities = 9/23 (39%), Positives = 11/23 (47%)
 Frame = -1

Query: 164 DDLPEXXSDLVAAXTSLDMXDFP 96
           D +PE  SDL      L + D P
Sbjct: 21  DSVPEVPSDLQQQLDELQLADKP 43


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 121,836
Number of Sequences: 2352
Number of extensions: 1181
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 563,979
effective HSP length: 33
effective length of database: 486,363
effective search space used: 10213623
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)