Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte4m17
(164 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M20419-1|AAA28989.1| 447|Drosophila melanogaster protein ( D.me... 48 2e-06
BT003242-1|AAO24999.1| 447|Drosophila melanogaster LD43681p pro... 48 2e-06
AE013599-2891|AAF57555.1| 447|Drosophila melanogaster CG9277-PB... 48 2e-06
M20420-1|AAA28991.1| 446|Drosophila melanogaster protein ( D.me... 47 3e-06
AY118725-1|AAM50585.1| 446|Drosophila melanogaster GH02051p pro... 47 3e-06
AE014297-930|AAF54373.1| 446|Drosophila melanogaster CG9359-PA ... 47 3e-06
M22335-1|AAA28993.1| 454|Drosophila melanogaster protein ( D.me... 47 4e-06
AY118611-1|AAM49980.1| 457|Drosophila melanogaster LP10436p pro... 47 4e-06
AE014297-4213|AAF56770.2| 522|Drosophila melanogaster CG4869-PA... 47 4e-06
BT015991-1|AAV36876.1| 454|Drosophila melanogaster RE53159p pro... 44 3e-05
AE013599-3851|AAF47193.2| 454|Drosophila melanogaster CG3401-PA... 44 3e-05
X16825-1|CAA34725.1| 19|Drosophila melanogaster protein ( Dros... 36 0.010
M14646-1|AAA28988.1| 462|Drosophila melanogaster protein ( D.me... 32 0.093
BT011034-1|AAR30194.1| 240|Drosophila melanogaster RE44641p pro... 32 0.093
AY089468-1|AAL90206.1| 462|Drosophila melanogaster AT27896p pro... 32 0.093
AE014296-1707|AAF50226.2| 462|Drosophila melanogaster CG8308-PA... 32 0.093
AE014296-1121|AAF50659.1| 462|Drosophila melanogaster CG32396-P... 32 0.093
M76765-1|AAB52553.1| 457|Drosophila melanogaster gamma-tubulin ... 32 0.12
M61765-1|AAA28597.1| 475|Drosophila melanogaster gamma-tubulin ... 32 0.12
AY070558-1|AAL48029.1| 457|Drosophila melanogaster LD32755p pro... 32 0.12
AY069633-1|AAL39778.1| 475|Drosophila melanogaster LD40196p pro... 32 0.12
AJ010552-1|CAA09233.1| 457|Drosophila melanogaster gamma-tubuli... 32 0.12
AF091265-1|AAC64117.1| 457|Drosophila melanogaster gamma-tubuli... 32 0.12
AF081253-1|AAC35844.1| 351|Drosophila melanogaster gamma-tubuli... 32 0.12
AF081252-1|AAC35843.1| 457|Drosophila melanogaster gamma-tubuli... 32 0.12
AF073994-1|AAC27620.1| 333|Drosophila melanogaster gamma-tubuli... 32 0.12
AE014134-3061|AAF53774.1| 457|Drosophila melanogaster CG17566-P... 32 0.12
AE014134-523|AAF51174.1| 475|Drosophila melanogaster CG3157-PA ... 32 0.12
>M20419-1|AAA28989.1| 447|Drosophila melanogaster protein (
D.melanogaster beta-1 tubulin mRNA, complete cds. ).
Length = 447
Score = 47.6 bits (108), Expect = 2e-06
Identities = 20/24 (83%), Positives = 20/24 (83%)
Frame = +3
Query: 93 MREIXHIQAGXCGNQIGXXFWEII 164
MREI HIQAG CGNQIG FWEII
Sbjct: 1 MREIVHIQAGQCGNQIGAKFWEII 24
>BT003242-1|AAO24999.1| 447|Drosophila melanogaster LD43681p
protein.
Length = 447
Score = 47.6 bits (108), Expect = 2e-06
Identities = 20/24 (83%), Positives = 20/24 (83%)
Frame = +3
Query: 93 MREIXHIQAGXCGNQIGXXFWEII 164
MREI HIQAG CGNQIG FWEII
Sbjct: 1 MREIVHIQAGQCGNQIGAKFWEII 24
>AE013599-2891|AAF57555.1| 447|Drosophila melanogaster CG9277-PB,
isoform B protein.
Length = 447
Score = 47.6 bits (108), Expect = 2e-06
Identities = 20/24 (83%), Positives = 20/24 (83%)
Frame = +3
Query: 93 MREIXHIQAGXCGNQIGXXFWEII 164
MREI HIQAG CGNQIG FWEII
Sbjct: 1 MREIVHIQAGQCGNQIGAKFWEII 24
>M20420-1|AAA28991.1| 446|Drosophila melanogaster protein (
D.melanogaster beta-2 tubulin mRNA, complete cds. ).
Length = 446
Score = 47.2 bits (107), Expect = 3e-06
Identities = 19/24 (79%), Positives = 20/24 (83%)
Frame = +3
Query: 93 MREIXHIQAGXCGNQIGXXFWEII 164
MREI HIQAG CGNQIG FWE+I
Sbjct: 1 MREIVHIQAGQCGNQIGGKFWEVI 24
>AY118725-1|AAM50585.1| 446|Drosophila melanogaster GH02051p
protein.
Length = 446
Score = 47.2 bits (107), Expect = 3e-06
Identities = 19/24 (79%), Positives = 20/24 (83%)
Frame = +3
Query: 93 MREIXHIQAGXCGNQIGXXFWEII 164
MREI HIQAG CGNQIG FWE+I
Sbjct: 1 MREIVHIQAGQCGNQIGGKFWEVI 24
>AE014297-930|AAF54373.1| 446|Drosophila melanogaster CG9359-PA
protein.
Length = 446
Score = 47.2 bits (107), Expect = 3e-06
Identities = 19/24 (79%), Positives = 20/24 (83%)
Frame = +3
Query: 93 MREIXHIQAGXCGNQIGXXFWEII 164
MREI HIQAG CGNQIG FWE+I
Sbjct: 1 MREIVHIQAGQCGNQIGGKFWEVI 24
>M22335-1|AAA28993.1| 454|Drosophila melanogaster protein (
D.melanogaster beta-3 tubulin gene, exons 2, 3 and 4. ).
Length = 454
Score = 46.8 bits (106), Expect = 4e-06
Identities = 19/24 (79%), Positives = 20/24 (83%)
Frame = +3
Query: 93 MREIXHIQAGXCGNQIGXXFWEII 164
MREI H+QAG CGNQIG FWEII
Sbjct: 1 MREIVHLQAGQCGNQIGAKFWEII 24
>AY118611-1|AAM49980.1| 457|Drosophila melanogaster LP10436p
protein.
Length = 457
Score = 46.8 bits (106), Expect = 4e-06
Identities = 19/24 (79%), Positives = 20/24 (83%)
Frame = +3
Query: 93 MREIXHIQAGXCGNQIGXXFWEII 164
MREI H+QAG CGNQIG FWEII
Sbjct: 1 MREIVHLQAGQCGNQIGSKFWEII 24
>AE014297-4213|AAF56770.2| 522|Drosophila melanogaster CG4869-PA
protein.
Length = 522
Score = 46.8 bits (106), Expect = 4e-06
Identities = 19/24 (79%), Positives = 20/24 (83%)
Frame = +3
Query: 93 MREIXHIQAGXCGNQIGXXFWEII 164
MREI H+QAG CGNQIG FWEII
Sbjct: 1 MREIVHLQAGQCGNQIGSKFWEII 24
>BT015991-1|AAV36876.1| 454|Drosophila melanogaster RE53159p
protein.
Length = 454
Score = 44.0 bits (99), Expect = 3e-05
Identities = 18/24 (75%), Positives = 20/24 (83%)
Frame = +3
Query: 93 MREIXHIQAGXCGNQIGXXFWEII 164
MREI ++QAG CGNQIG FWEII
Sbjct: 1 MREIVNLQAGQCGNQIGAKFWEII 24
>AE013599-3851|AAF47193.2| 454|Drosophila melanogaster CG3401-PA
protein.
Length = 454
Score = 44.0 bits (99), Expect = 3e-05
Identities = 18/24 (75%), Positives = 20/24 (83%)
Frame = +3
Query: 93 MREIXHIQAGXCGNQIGXXFWEII 164
MREI ++QAG CGNQIG FWEII
Sbjct: 1 MREIVNLQAGQCGNQIGAKFWEII 24
>X16825-1|CAA34725.1| 19|Drosophila melanogaster protein (
Drosophila melanogasterDNA for 60C beta tubulin gene
making beta 3 tubulin isoform.).
Length = 19
Score = 35.5 bits (78), Expect = 0.010
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = +3
Query: 93 MREIXHIQAGXCGNQIG 143
MREI H+QAG CGNQIG
Sbjct: 1 MREIVHLQAGQCGNQIG 17
>M14646-1|AAA28988.1| 462|Drosophila melanogaster protein (
D.melanogaster alpha-tubulin gene (alpha-4), complete
cds. ).
Length = 462
Score = 32.3 bits (70), Expect = 0.093
Identities = 13/23 (56%), Positives = 15/23 (65%)
Frame = +3
Query: 93 MREIXHIQAGXCGNQIGXXFWEI 161
MRE+ IQ G CG QIG WE+
Sbjct: 1 MREVVSIQIGQCGIQIGNACWEL 23
>BT011034-1|AAR30194.1| 240|Drosophila melanogaster RE44641p
protein.
Length = 240
Score = 32.3 bits (70), Expect = 0.093
Identities = 13/23 (56%), Positives = 15/23 (65%)
Frame = +3
Query: 93 MREIXHIQAGXCGNQIGXXFWEI 161
MRE+ IQ G CG QIG WE+
Sbjct: 1 MREVVSIQIGQCGIQIGNACWEL 23
>AY089468-1|AAL90206.1| 462|Drosophila melanogaster AT27896p
protein.
Length = 462
Score = 32.3 bits (70), Expect = 0.093
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = +3
Query: 93 MREIXHIQAGXCGNQIGXXFWEII 164
MREI +Q G GN IG FW +I
Sbjct: 1 MREIVTLQIGGAGNAIGDSFWHVI 24
>AE014296-1707|AAF50226.2| 462|Drosophila melanogaster CG8308-PA
protein.
Length = 462
Score = 32.3 bits (70), Expect = 0.093
Identities = 13/23 (56%), Positives = 15/23 (65%)
Frame = +3
Query: 93 MREIXHIQAGXCGNQIGXXFWEI 161
MRE+ IQ G CG QIG WE+
Sbjct: 1 MREVVSIQIGQCGIQIGNACWEL 23
>AE014296-1121|AAF50659.1| 462|Drosophila melanogaster CG32396-PA
protein.
Length = 462
Score = 32.3 bits (70), Expect = 0.093
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = +3
Query: 93 MREIXHIQAGXCGNQIGXXFWEII 164
MREI +Q G GN IG FW +I
Sbjct: 1 MREIVTLQIGGAGNAIGDSFWHVI 24
>M76765-1|AAB52553.1| 457|Drosophila melanogaster gamma-tubulin
protein.
Length = 457
Score = 31.9 bits (69), Expect = 0.12
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = +3
Query: 99 EIXHIQAGXCGNQIGXXFWE 158
EI +Q G CGNQIG FW+
Sbjct: 4 EIITLQLGQCGNQIGFEFWK 23
>M61765-1|AAA28597.1| 475|Drosophila melanogaster gamma-tubulin
protein.
Length = 475
Score = 31.9 bits (69), Expect = 0.12
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = +3
Query: 99 EIXHIQAGXCGNQIGXXFWE 158
EI +Q G CGNQIG FW+
Sbjct: 4 EIITLQLGQCGNQIGFEFWK 23
>AY070558-1|AAL48029.1| 457|Drosophila melanogaster LD32755p
protein.
Length = 457
Score = 31.9 bits (69), Expect = 0.12
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = +3
Query: 99 EIXHIQAGXCGNQIGXXFWE 158
EI +Q G CGNQIG FW+
Sbjct: 4 EIITLQLGQCGNQIGFEFWK 23
>AY069633-1|AAL39778.1| 475|Drosophila melanogaster LD40196p
protein.
Length = 475
Score = 31.9 bits (69), Expect = 0.12
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = +3
Query: 99 EIXHIQAGXCGNQIGXXFWE 158
EI +Q G CGNQIG FW+
Sbjct: 4 EIITLQLGQCGNQIGFEFWK 23
>AJ010552-1|CAA09233.1| 457|Drosophila melanogaster gamma-tubulin
protein.
Length = 457
Score = 31.9 bits (69), Expect = 0.12
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = +3
Query: 99 EIXHIQAGXCGNQIGXXFWE 158
EI +Q G CGNQIG FW+
Sbjct: 4 EIITLQLGQCGNQIGFEFWK 23
>AF091265-1|AAC64117.1| 457|Drosophila melanogaster gamma-tubulin
37CD protein.
Length = 457
Score = 31.9 bits (69), Expect = 0.12
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = +3
Query: 99 EIXHIQAGXCGNQIGXXFWE 158
EI +Q G CGNQIG FW+
Sbjct: 4 EIITLQLGQCGNQIGFEFWK 23
>AF081253-1|AAC35844.1| 351|Drosophila melanogaster gamma-tubulin
protein.
Length = 351
Score = 31.9 bits (69), Expect = 0.12
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = +3
Query: 99 EIXHIQAGXCGNQIGXXFWE 158
EI +Q G CGNQIG FW+
Sbjct: 4 EIITLQLGQCGNQIGFEFWK 23
>AF081252-1|AAC35843.1| 457|Drosophila melanogaster gamma-tubulin
protein.
Length = 457
Score = 31.9 bits (69), Expect = 0.12
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = +3
Query: 99 EIXHIQAGXCGNQIGXXFWE 158
EI +Q G CGNQIG FW+
Sbjct: 4 EIITLQLGQCGNQIGFEFWK 23
>AF073994-1|AAC27620.1| 333|Drosophila melanogaster gamma-tubulin
protein.
Length = 333
Score = 31.9 bits (69), Expect = 0.12
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = +3
Query: 99 EIXHIQAGXCGNQIGXXFWE 158
EI +Q G CGNQIG FW+
Sbjct: 4 EIITLQLGQCGNQIGFEFWK 23
>AE014134-3061|AAF53774.1| 457|Drosophila melanogaster CG17566-PA
protein.
Length = 457
Score = 31.9 bits (69), Expect = 0.12
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = +3
Query: 99 EIXHIQAGXCGNQIGXXFWE 158
EI +Q G CGNQIG FW+
Sbjct: 4 EIITLQLGQCGNQIGFEFWK 23
>AE014134-523|AAF51174.1| 475|Drosophila melanogaster CG3157-PA
protein.
Length = 475
Score = 31.9 bits (69), Expect = 0.12
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = +3
Query: 99 EIXHIQAGXCGNQIGXXFWE 158
EI +Q G CGNQIG FW+
Sbjct: 4 EIITLQLGQCGNQIGFEFWK 23
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,113,439
Number of Sequences: 53049
Number of extensions: 46717
Number of successful extensions: 93
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 93
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 93
length of database: 24,988,368
effective HSP length: 35
effective length of database: 23,131,653
effective search space used: 439501407
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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