Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte4m15
         (428 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY569703-1|AAS86656.1|  396|Apis mellifera complementary sex det...    23   1.1  
AY569701-1|AAS86654.1|  407|Apis mellifera complementary sex det...    23   1.1  
AY569700-1|AAS86653.1|  407|Apis mellifera complementary sex det...    23   1.1  
AY569699-1|AAS86652.1|  396|Apis mellifera complementary sex det...    23   1.1  
DQ325077-1|ABD14091.1|  181|Apis mellifera complementary sex det...    22   3.3  
DQ325076-1|ABD14090.1|  191|Apis mellifera complementary sex det...    22   3.3  
DQ435326-1|ABD92641.1|  132|Apis mellifera OBP9 protein.               21   4.4  
AY823258-1|AAX18443.1|  145|Apis mellifera pburs protein.              21   7.7  
AM420632-1|CAM06632.1|  145|Apis mellifera bursicon subunit beta...    21   7.7  

>AY569703-1|AAS86656.1|  396|Apis mellifera complementary sex
           determiner protein.
          Length = 396

 Score = 23.4 bits (48), Expect = 1.1
 Identities = 8/26 (30%), Positives = 16/26 (61%)
 Frame = +3

Query: 153 REIRRTNFVLSHVLHTNEEYRKQNYH 230
           RE +  + +L++ +H N  Y+K  Y+
Sbjct: 299 REPKIISSLLNNTIHNNNNYKKLQYY 324


>AY569701-1|AAS86654.1|  407|Apis mellifera complementary sex
           determiner protein.
          Length = 407

 Score = 23.4 bits (48), Expect = 1.1
 Identities = 8/26 (30%), Positives = 16/26 (61%)
 Frame = +3

Query: 153 REIRRTNFVLSHVLHTNEEYRKQNYH 230
           RE +  + +L++ +H N  Y+K  Y+
Sbjct: 310 REPKIISSLLNNTIHNNNNYKKLQYY 335


>AY569700-1|AAS86653.1|  407|Apis mellifera complementary sex
           determiner protein.
          Length = 407

 Score = 23.4 bits (48), Expect = 1.1
 Identities = 8/26 (30%), Positives = 16/26 (61%)
 Frame = +3

Query: 153 REIRRTNFVLSHVLHTNEEYRKQNYH 230
           RE +  + +L++ +H N  Y+K  Y+
Sbjct: 310 REPKIISSLLNNTIHNNNNYKKLQYY 335


>AY569699-1|AAS86652.1|  396|Apis mellifera complementary sex
           determiner protein.
          Length = 396

 Score = 23.4 bits (48), Expect = 1.1
 Identities = 8/26 (30%), Positives = 16/26 (61%)
 Frame = +3

Query: 153 REIRRTNFVLSHVLHTNEEYRKQNYH 230
           RE +  + +L++ +H N  Y+K  Y+
Sbjct: 299 REPKIISSLLNNTIHNNNNYKKLQYY 324


>DQ325077-1|ABD14091.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.8 bits (44), Expect = 3.3
 Identities = 8/28 (28%), Positives = 14/28 (50%)
 Frame = +3

Query: 153 REIRRTNFVLSHVLHTNEEYRKQNYHCY 236
           RE +  + + +  +H N  Y   NY+ Y
Sbjct: 77  REPKIISSLSNKTIHNNNNYNNNNYNNY 104


>DQ325076-1|ABD14090.1|  191|Apis mellifera complementary sex
           determiner protein.
          Length = 191

 Score = 21.8 bits (44), Expect = 3.3
 Identities = 8/28 (28%), Positives = 14/28 (50%)
 Frame = +3

Query: 153 REIRRTNFVLSHVLHTNEEYRKQNYHCY 236
           RE +  + + +  +H N  Y   NY+ Y
Sbjct: 77  REPKIISSLSNKTIHNNNNYNNNNYNNY 104


>DQ435326-1|ABD92641.1|  132|Apis mellifera OBP9 protein.
          Length = 132

 Score = 21.4 bits (43), Expect = 4.4
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = +3

Query: 219 QNYHCYFLAAARLIFTTAG 275
           +NYH +F+    LIF   G
Sbjct: 3   KNYHFFFILVITLIFLYFG 21


>AY823258-1|AAX18443.1|  145|Apis mellifera pburs protein.
          Length = 145

 Score = 20.6 bits (41), Expect = 7.7
 Identities = 9/25 (36%), Positives = 15/25 (60%), Gaps = 2/25 (8%)
 Frame = +3

Query: 273 GFVTARL--GAASTSGIASEVFFCR 341
           GF  +++    AST+G + E + CR
Sbjct: 71  GFCNSQVQPSVASTTGFSKECYCCR 95


>AM420632-1|CAM06632.1|  145|Apis mellifera bursicon subunit beta
           protein precursor protein.
          Length = 145

 Score = 20.6 bits (41), Expect = 7.7
 Identities = 9/25 (36%), Positives = 15/25 (60%), Gaps = 2/25 (8%)
 Frame = +3

Query: 273 GFVTARL--GAASTSGIASEVFFCR 341
           GF  +++    AST+G + E + CR
Sbjct: 71  GFCNSQVQPSVASTTGFSKECYCCR 95


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 100,980
Number of Sequences: 438
Number of extensions: 1551
Number of successful extensions: 11
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 11121030
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)