Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte4m13
         (513 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 pro...    27   0.49 
AF000953-1|AAB96576.1|  433|Anopheles gambiae carboxypeptidase A...    26   0.86 
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           23   8.0  

>AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 protein.
          Length = 2051

 Score = 26.6 bits (56), Expect = 0.49
 Identities = 19/65 (29%), Positives = 30/65 (46%), Gaps = 2/65 (3%)
 Frame = +1

Query: 19   HVRGLLGGILKFPVIILLTISMDILFVDNERQDEIETFYEASQRQRDYYRGLRKAYHPL- 195
            H+R  +GG+ +F     L  SM+  F   ++Q +    ++   +  DYY    K Y  L 
Sbjct: 923  HLRKNMGGLKRFSTFYYLISSMETFFDLLDKQYDSYNKHQ-EYKSSDYYYKYYKQYPHLF 981

Query: 196  -TYFS 207
              YFS
Sbjct: 982  KDYFS 986


>AF000953-1|AAB96576.1|  433|Anopheles gambiae carboxypeptidase A
           protein.
          Length = 433

 Score = 25.8 bits (54), Expect = 0.86
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = +1

Query: 163 YRGLRKAYHPLTYFSDPEYMW 225
           +R  RKAY P  Y +DP   W
Sbjct: 242 WRKTRKAYGPFCYGADPNRNW 262


>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 22.6 bits (46), Expect = 8.0
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = +1

Query: 304  PVTLGRTLAIPALPDRTLAGRFNKAAC 384
            PV+ G+    P    RT  G++ ++AC
Sbjct: 1230 PVSAGKPPQAPPKAKRTTLGQYIRSAC 1256


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 473,638
Number of Sequences: 2352
Number of extensions: 8405
Number of successful extensions: 10
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 46514490
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)