Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte4m10
         (710 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    24   1.4  
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    23   2.5  
AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle pr...    23   3.2  
AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    21   7.5  
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    21   7.5  
AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory recept...    21   9.9  

>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = -3

Query: 702 QACFPCLDLVCRFFYSNGL 646
           Q C P  D  C+  Y+NGL
Sbjct: 564 QPCNPIYDAYCQKHYANGL 582


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 15/52 (28%), Positives = 21/52 (40%)
 Frame = -2

Query: 652 RFAYWVEHVLKSTLRFLHHLECVTRLLGRNRFGFVKVPTCHLI*FSEDLLLW 497
           R  + VEH+L    R +  + C   +    R  +V V   HL     D  LW
Sbjct: 468 RLNFSVEHLLMELSRAIDSVACSKTVSDGIRHYYVNVTFPHLFNGLVDYSLW 519


>AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle
           protein.
          Length = 361

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = +1

Query: 475 SLRNVDGTKGVDPQKIKLDDKL 540
           SLRN    +  DPQ ++LD+ L
Sbjct: 88  SLRNTQEEEPPDPQLMRLDNML 109


>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 6/21 (28%), Positives = 13/21 (61%)
 Frame = -1

Query: 710 FLFKLVFLVWIWFVDSFIVTV 648
           ++   VFL ++W  +  +VT+
Sbjct: 146 YILATVFLAYVWICEMGVVTL 166


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 6/21 (28%), Positives = 13/21 (61%)
 Frame = -1

Query: 710 FLFKLVFLVWIWFVDSFIVTV 648
           ++   VFL ++W  +  +VT+
Sbjct: 146 YILATVFLAYVWICEMGVVTL 166


>AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory receptor
           candidate 27 protein.
          Length = 346

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = +2

Query: 233 FKVLFFSIKMLNLVNYQI 286
           F V FFS  +  LVNY +
Sbjct: 41  FAVTFFSAWICALVNYNV 58


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 146,753
Number of Sequences: 336
Number of extensions: 3032
Number of successful extensions: 15
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18843005
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)