Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte4m08
         (708 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U77974-1|AAB36556.1|  276|Tribolium castaneum transcription fact...    22   4.3  
EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    22   4.3  
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    22   4.3  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   7.4  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   7.4  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   7.4  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   7.4  
AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory recept...    21   7.4  
AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory recept...    21   7.4  
DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9 prot...    21   9.8  

>U77974-1|AAB36556.1|  276|Tribolium castaneum transcription factor
           homolog protein.
          Length = 276

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 8/22 (36%), Positives = 11/22 (50%)
 Frame = +1

Query: 547 ISIAWQYAKTEMAPPMTLNFFH 612
           ++IAW YA     P    + FH
Sbjct: 131 MAIAWPYAAVYTDPAFAASIFH 152


>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = -2

Query: 290 CDPIQCVFHLCY 255
           CDP QCV   C+
Sbjct: 155 CDPTQCVLPDCF 166


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = -2

Query: 290 CDPIQCVFHLCY 255
           CDP QCV   C+
Sbjct: 162 CDPTQCVLPDCF 173


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = +3

Query: 327  KQLPGELEYLQKELEKVKRKLK 392
            K+   ELE  +K+ E+ KRK K
Sbjct: 1067 KKTKKELEEEKKQAEEAKRKAK 1088


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = +3

Query: 327  KQLPGELEYLQKELEKVKRKLK 392
            K+   ELE  +K+ E+ KRK K
Sbjct: 1067 KKTKKELEEEKKQAEEAKRKAK 1088


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = +3

Query: 327  KQLPGELEYLQKELEKVKRKLK 392
            K+   ELE  +K+ E+ KRK K
Sbjct: 1067 KKTKKELEEEKKQAEEAKRKAK 1088


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = +3

Query: 327  KQLPGELEYLQKELEKVKRKLK 392
            K+   ELE  +K+ E+ KRK K
Sbjct: 1067 KKTKKELEEEKKQAEEAKRKAK 1088


>AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory receptor
           candidate 13 protein.
          Length = 390

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = -2

Query: 134 FSCYSSHFLKIIISCVFSLV 75
           F+ YSS  L   +SCV +L+
Sbjct: 285 FTLYSSLLLLDYVSCVVALI 304


>AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory receptor
           candidate 12 protein.
          Length = 316

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = -2

Query: 134 FSCYSSHFLKIIISCVFSLV 75
           F+ YSS  L   +SCV +L+
Sbjct: 211 FTLYSSLLLLDYVSCVVALI 230


>DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9
           protein.
          Length = 383

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 10/41 (24%), Positives = 21/41 (51%)
 Frame = +1

Query: 562 QYAKTEMAPPMTLNFFHGKVGQNLEGIVSKTVDSFIRGLEK 684
           ++   ++ P +  +  +  VG   +G+VS   D  I GL++
Sbjct: 39  KFTALDVDPTLCTHLLYAFVGLRDDGVVSVLDDWEITGLDE 79


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 152,157
Number of Sequences: 336
Number of extensions: 3067
Number of successful extensions: 12
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18738900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)