Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte4m07
(762 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
M29488-1|AAA27723.1| 86|Apis mellifera protein ( Bee homeobox-... 28 0.11
D79207-1|BAA23639.1| 432|Apis mellifera milk protein protein. 23 3.1
AF388203-1|AAM73637.1| 432|Apis mellifera major royal jelly pro... 23 3.1
AF000633-1|AAC61895.1| 432|Apis mellifera major royal jelly pro... 23 3.1
Z26318-1|CAA81227.1| 544|Apis mellifera royal jelly protein RJP... 23 4.1
AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex det... 23 4.1
AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex det... 23 4.1
AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex det... 23 4.1
AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex det... 23 4.1
AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter... 23 4.1
AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter... 23 4.1
AY313893-1|AAQ82184.1| 437|Apis mellifera major royal jelly pro... 22 7.1
DQ071552-1|AAY82248.1| 495|Apis mellifera anarchy 1 protein. 21 9.4
>M29488-1|AAA27723.1| 86|Apis mellifera protein ( Bee
homeobox-containing gene,partial cds, clone H55. ).
Length = 86
Score = 27.9 bits (59), Expect = 0.11
Identities = 11/21 (52%), Positives = 15/21 (71%), Gaps = 1/21 (4%)
Frame = -2
Query: 422 LRWKQEHKIESMT-VSYHERP 363
++WK+EHK+ SM V YH P
Sbjct: 61 MKWKKEHKMASMNIVPYHMSP 81
>D79207-1|BAA23639.1| 432|Apis mellifera milk protein protein.
Length = 432
Score = 23.0 bits (47), Expect = 3.1
Identities = 8/30 (26%), Positives = 19/30 (63%)
Frame = +2
Query: 68 FSLLLCNDILIILGDEVEKSDINNFNFSNV 157
F + + +++L ++++K N+FNF +V
Sbjct: 369 FDRYINREYILVLSNKMQKMVNNDFNFDDV 398
>AF388203-1|AAM73637.1| 432|Apis mellifera major royal jelly
protein MRJP1 protein.
Length = 432
Score = 23.0 bits (47), Expect = 3.1
Identities = 8/30 (26%), Positives = 19/30 (63%)
Frame = +2
Query: 68 FSLLLCNDILIILGDEVEKSDINNFNFSNV 157
F + + +++L ++++K N+FNF +V
Sbjct: 369 FDRYINREYILVLSNKMQKMVNNDFNFDDV 398
>AF000633-1|AAC61895.1| 432|Apis mellifera major royal jelly
protein MRJP1 protein.
Length = 432
Score = 23.0 bits (47), Expect = 3.1
Identities = 8/30 (26%), Positives = 19/30 (63%)
Frame = +2
Query: 68 FSLLLCNDILIILGDEVEKSDINNFNFSNV 157
F + + +++L ++++K N+FNF +V
Sbjct: 369 FDRYINREYILVLSNKMQKMVNNDFNFDDV 398
>Z26318-1|CAA81227.1| 544|Apis mellifera royal jelly protein
RJP57-1 protein.
Length = 544
Score = 22.6 bits (46), Expect = 4.1
Identities = 8/24 (33%), Positives = 17/24 (70%)
Frame = +2
Query: 86 NDILIILGDEVEKSDINNFNFSNV 157
N+ ++ L + ++K N+FNF++V
Sbjct: 378 NEYMLALSNRMQKIINNDFNFNDV 401
>AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 22.6 bits (46), Expect = 4.1
Identities = 8/23 (34%), Positives = 14/23 (60%)
Frame = -1
Query: 105 SIIKISLHNNNEKKPSIFYSRRY 37
S++ ++HNNN K +Y+ Y
Sbjct: 306 SLLNNTIHNNNNYKKLQYYNINY 328
>AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 22.6 bits (46), Expect = 4.1
Identities = 8/23 (34%), Positives = 14/23 (60%)
Frame = -1
Query: 105 SIIKISLHNNNEKKPSIFYSRRY 37
S++ ++HNNN K +Y+ Y
Sbjct: 317 SLLNNTIHNNNNYKKLQYYNINY 339
>AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 22.6 bits (46), Expect = 4.1
Identities = 8/23 (34%), Positives = 14/23 (60%)
Frame = -1
Query: 105 SIIKISLHNNNEKKPSIFYSRRY 37
S++ ++HNNN K +Y+ Y
Sbjct: 317 SLLNNTIHNNNNYKKLQYYNINY 339
>AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 22.6 bits (46), Expect = 4.1
Identities = 8/23 (34%), Positives = 14/23 (60%)
Frame = -1
Query: 105 SIIKISLHNNNEKKPSIFYSRRY 37
S++ ++HNNN K +Y+ Y
Sbjct: 306 SLLNNTIHNNNNYKKLQYYNINY 328
>AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 593
Score = 22.6 bits (46), Expect = 4.1
Identities = 9/32 (28%), Positives = 18/32 (56%)
Frame = +3
Query: 315 KSDIWLYFIIRISYLTRSLMITDGHTFNFMLL 410
+ ++++ + +SYL IT+G + F LL
Sbjct: 414 RKELFIAIVCFVSYLIGLFCITEGGMYVFQLL 445
>AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 646
Score = 22.6 bits (46), Expect = 4.1
Identities = 9/32 (28%), Positives = 18/32 (56%)
Frame = +3
Query: 315 KSDIWLYFIIRISYLTRSLMITDGHTFNFMLL 410
+ ++++ + +SYL IT+G + F LL
Sbjct: 467 RKELFIAIVCFVSYLIGLFCITEGGMYVFQLL 498
>AY313893-1|AAQ82184.1| 437|Apis mellifera major royal jelly
protein MRJP6 protein.
Length = 437
Score = 21.8 bits (44), Expect = 7.1
Identities = 8/24 (33%), Positives = 15/24 (62%)
Frame = +2
Query: 86 NDILIILGDEVEKSDINNFNFSNV 157
N+ ++ L + ++K N+FNF V
Sbjct: 376 NEYMLALSNRMQKIVNNDFNFDEV 399
>DQ071552-1|AAY82248.1| 495|Apis mellifera anarchy 1 protein.
Length = 495
Score = 21.4 bits (43), Expect = 9.4
Identities = 8/17 (47%), Positives = 14/17 (82%)
Frame = +2
Query: 95 LIILGDEVEKSDINNFN 145
++I G E+EKS+ ++FN
Sbjct: 54 IVIGGFEIEKSEDDSFN 70
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 189,959
Number of Sequences: 438
Number of extensions: 3938
Number of successful extensions: 15
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 23789892
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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