Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte4m05
         (601 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A7RJX0 Cluster: Predicted protein; n=1; Nematostella ve...    36   0.55 
UniRef50_Q9VD01 Cluster: CG18594-PA; n=7; Diptera|Rep: CG18594-P...    35   1.7  
UniRef50_Q0EAD4 Cluster: Hypothetical RFT1-like protein; n=2; Sa...    33   3.9  
UniRef50_Q01PZ0 Cluster: Putative uncharacterized protein precur...    32   9.0  
UniRef50_A7U5X3 Cluster: DEAD-box helicase 18; n=7; Plasmodium|R...    32   9.0  

>UniRef50_A7RJX0 Cluster: Predicted protein; n=1; Nematostella
           vectensis|Rep: Predicted protein - Nematostella
           vectensis
          Length = 235

 Score = 36.3 bits (80), Expect = 0.55
 Identities = 14/34 (41%), Positives = 24/34 (70%), Gaps = 2/34 (5%)
 Frame = +2

Query: 389 QKKFYTIILVDPDSPPQVDGEF--YLHMLKSNIP 484
           + K YT++++DPD+P  +  ++  +LH LK NIP
Sbjct: 114 ESKLYTVMVIDPDAPSPIRHQYRSWLHYLKVNIP 147


>UniRef50_Q9VD01 Cluster: CG18594-PA; n=7; Diptera|Rep: CG18594-PA -
           Drosophila melanogaster (Fruit fly)
          Length = 176

 Score = 34.7 bits (76), Expect = 1.7
 Identities = 17/30 (56%), Positives = 21/30 (70%), Gaps = 2/30 (6%)
 Frame = +2

Query: 401 YTIILVDPDSPPQVDGEF--YLHMLKSNIP 484
           YTI+LVDPD+P + D +F   LH L  NIP
Sbjct: 56  YTILLVDPDAPSREDPKFRELLHWLVINIP 85


>UniRef50_Q0EAD4 Cluster: Hypothetical RFT1-like protein; n=2;
           Sasa|Rep: Hypothetical RFT1-like protein - Sasa
           nipponica
          Length = 88

 Score = 33.5 bits (73), Expect = 3.9
 Identities = 15/33 (45%), Positives = 23/33 (69%), Gaps = 2/33 (6%)
 Frame = +2

Query: 392 KKFYTIILVDPD--SPPQVDGEFYLHMLKSNIP 484
           + FYT+++VDPD  SP + +   YLH L ++IP
Sbjct: 20  RTFYTLVMVDPDAPSPSEPNLREYLHWLVTDIP 52


>UniRef50_Q01PZ0 Cluster: Putative uncharacterized protein
           precursor; n=1; Solibacter usitatus Ellin6076|Rep:
           Putative uncharacterized protein precursor - Solibacter
           usitatus (strain Ellin6076)
          Length = 193

 Score = 32.3 bits (70), Expect = 9.0
 Identities = 15/36 (41%), Positives = 20/36 (55%)
 Frame = +2

Query: 206 ITSVGGTIVNDHNCDVLLPAQVFLDEPLFQYFMADS 313
           I+ VGG   N + CD   P  +FL+EP  QY +  S
Sbjct: 57  ISDVGGGYRNPYYCDGPAPGPIFLNEPAGQYIIVVS 92


>UniRef50_A7U5X3 Cluster: DEAD-box helicase 18; n=7; Plasmodium|Rep:
           DEAD-box helicase 18 - Plasmodium falciparum
          Length = 946

 Score = 32.3 bits (70), Expect = 9.0
 Identities = 15/42 (35%), Positives = 26/42 (61%)
 Frame = -3

Query: 566 KVFQSYLILYNRILSIYIITTLKKLNLQEYSILAYANKIHRL 441
           K++++ +  YN+IL   IIT  ++L  Q + +L   NK H+L
Sbjct: 184 KMYRNSIDNYNKILGGIIITPTRELVFQIFEVLNMLNKYHKL 225


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 504,098,377
Number of Sequences: 1657284
Number of extensions: 9474935
Number of successful extensions: 19195
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 18747
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19187
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 42317807226
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)