Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte4m05
         (601 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z93397-2|CAB07717.2|  505|Caenorhabditis elegans Hypothetical pr...    27   7.7  
U13646-6|AAC24421.2| 1376|Caenorhabditis elegans Flectin protein...    27   7.7  
AL034365-5|CAA22258.1|  172|Caenorhabditis elegans Hypothetical ...    27   7.7  

>Z93397-2|CAB07717.2|  505|Caenorhabditis elegans Hypothetical
           protein ZC482.3 protein.
          Length = 505

 Score = 27.5 bits (58), Expect = 7.7
 Identities = 15/37 (40%), Positives = 17/37 (45%)
 Frame = +1

Query: 310 FGKHYIHTFFQITINLNYIYSNRGYIPEKVLHDYTGG 420
           FG HY      I +NL YI SN G +      D  GG
Sbjct: 458 FGAHYSTPNLMIRVNLTYIGSNCGILFYFKKRDKLGG 494


>U13646-6|AAC24421.2| 1376|Caenorhabditis elegans Flectin protein 1
           protein.
          Length = 1376

 Score = 27.5 bits (58), Expect = 7.7
 Identities = 10/24 (41%), Positives = 16/24 (66%)
 Frame = -2

Query: 231 TIVPPTLVMFNPVNLSQPSSKLFT 160
           T+ PPT+V  +PV+ +Q   + FT
Sbjct: 727 TVAPPTVVSVSPVSAAQQQQRKFT 750


>AL034365-5|CAA22258.1|  172|Caenorhabditis elegans Hypothetical
           protein Y69E1A.5 protein.
          Length = 172

 Score = 27.5 bits (58), Expect = 7.7
 Identities = 12/35 (34%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
 Frame = +2

Query: 392 KKFYTIILVDPDSPPQVDGEF--YLHMLKSNIPVS 490
           +  YT++++DPD+  + +     +LH L  NIP S
Sbjct: 60  ESIYTVLMIDPDNLSRKNPSVAEWLHWLVCNIPAS 94


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,152,118
Number of Sequences: 27780
Number of extensions: 244442
Number of successful extensions: 546
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 533
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 546
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1279376318
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)