Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte4m04
         (706 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090815-1|BAC57905.1|  492|Anopheles gambiae gag-like protein p...    26   1.3  
DQ974164-1|ABJ52804.1|  410|Anopheles gambiae serpin 4C protein.       25   3.1  

>AB090815-1|BAC57905.1|  492|Anopheles gambiae gag-like protein
           protein.
          Length = 492

 Score = 25.8 bits (54), Expect = 1.3
 Identities = 16/60 (26%), Positives = 32/60 (53%)
 Frame = +1

Query: 418 TVEIVSIPNQVLEIVEAEKAVDNVISMTEVSVTETIAKNSSFKIPKMPLVNSEVLKNAIE 597
           TVE+V+  +    +VEA    +NV++  +   ++ +   SS K P + +V    L+ A++
Sbjct: 45  TVEVVASTSVDSAVVEAVTGEENVMAAEDSVTSQPVESFSSSKEPAL-VVGGSKLQEALK 103


>DQ974164-1|ABJ52804.1|  410|Anopheles gambiae serpin 4C protein.
          Length = 410

 Score = 24.6 bits (51), Expect = 3.1
 Identities = 15/64 (23%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
 Frame = +1

Query: 412 KNTVEIVSIP-NQVLEIVEAEKAVDNVISMTEVSVTETIAKNSSFKIPKMPLVNSEVLKN 588
           +N    + +P N   ++V++ ++      + ++ VT+   K+ +   PKM + NS  LKN
Sbjct: 179 QNVTMYIFMPMNSTRQLVQSMQSKITAERVNDI-VTKMKMKSVTVMFPKMHISNSISLKN 237

Query: 589 AIEK 600
            +++
Sbjct: 238 VLQQ 241


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 594,108
Number of Sequences: 2352
Number of extensions: 10459
Number of successful extensions: 52
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 52
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 52
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 71922660
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)