BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte4m02
(719 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT029274-1|ABK30911.1| 336|Drosophila melanogaster IP09655p pro... 126 2e-29
AY119152-1|AAM51012.1| 336|Drosophila melanogaster RE60471p pro... 126 2e-29
AE014297-2468|AAF55516.1| 336|Drosophila melanogaster CG7998-PA... 126 2e-29
AY089402-1|AAL90140.1| 347|Drosophila melanogaster AT22817p pro... 118 8e-27
AE014296-2223|AAF49862.1| 347|Drosophila melanogaster CG10749-P... 118 8e-27
AY075238-1|AAL68105.1| 349|Drosophila melanogaster AT19883p pro... 114 1e-25
AE014296-2222|AAF49863.1| 349|Drosophila melanogaster CG10748-P... 114 1e-25
X59449-1|CAA42068.1| 883|Drosophila melanogaster dynamin protein. 29 6.4
X59448-1|CAA42067.1| 836|Drosophila melanogaster dynamin protein. 29 6.4
X59435-1|CAA42061.1| 836|Drosophila melanogaster dynamnin-like ... 29 6.4
BT010049-1|AAQ22518.1| 877|Drosophila melanogaster LD21622p pro... 29 6.4
AE014298-2280|ABI30984.1| 830|Drosophila melanogaster CG18102-P... 29 6.4
AE014298-2279|ABI30983.1| 830|Drosophila melanogaster CG18102-P... 29 6.4
AE014298-2278|AAS65369.1| 830|Drosophila melanogaster CG18102-P... 29 6.4
AE014298-2277|AAN09373.1| 830|Drosophila melanogaster CG18102-P... 29 6.4
AE014298-2276|AAN09372.1| 830|Drosophila melanogaster CG18102-P... 29 6.4
AE014298-2275|AAS65368.1| 830|Drosophila melanogaster CG18102-P... 29 6.4
AE014298-2274|AAS65367.1| 877|Drosophila melanogaster CG18102-P... 29 6.4
AE014298-2273|AAS65366.1| 877|Drosophila melanogaster CG18102-P... 29 6.4
AE014298-2272|AAF48536.2| 877|Drosophila melanogaster CG18102-P... 29 6.4
AY119579-1|AAM50233.1| 634|Drosophila melanogaster LD08709p pro... 29 8.4
AE014296-984|AAF50757.1| 634|Drosophila melanogaster CG10583-PA... 29 8.4
>BT029274-1|ABK30911.1| 336|Drosophila melanogaster IP09655p
protein.
Length = 336
Score = 126 bits (305), Expect = 2e-29
Identities = 64/171 (37%), Positives = 104/171 (60%)
Frame = +2
Query: 206 QKRNVQVSVIGAASDIGSYVSLFLKRNSKVSKLHLYDDDDRIKGTELELSNLPGGPSVSA 385
Q+ N +V+V GAA IG +SL LK+N V+ L LYD G +LS++ +
Sbjct: 21 QQNNYKVTVCGAAGGIGQPLSLLLKQNPLVTDLALYDIV-HTPGVAADLSHIDTKSKTAG 79
Query: 386 FIGDTNLEQAIHSSNLVVMVSRMPRKPGNTREQMLGANAPLIQRLCKAIAAQNQEAFVAI 565
FIG L ++ S++VV+ + +PRKPG TR+ + NA +I+ + +IA +A VAI
Sbjct: 80 FIGADQLGDSLKGSDVVVIPAGVPRKPGMTRDDLFNVNAGIIKDISNSIAKNCPKALVAI 139
Query: 566 STNPINYLIPFASTVMYKYGCYNPSKMFGITHIDTSRSRSFVAKALKINAQ 718
TNP+N +P A+ ++ K G Y+P ++FG++ +D R+R+F+ AL ++ Q
Sbjct: 140 ITNPVNTCVPIAAEILKKAGVYDPKRLFGVSTLDVVRARAFIGHALGVDPQ 190
>AY119152-1|AAM51012.1| 336|Drosophila melanogaster RE60471p
protein.
Length = 336
Score = 126 bits (305), Expect = 2e-29
Identities = 64/171 (37%), Positives = 104/171 (60%)
Frame = +2
Query: 206 QKRNVQVSVIGAASDIGSYVSLFLKRNSKVSKLHLYDDDDRIKGTELELSNLPGGPSVSA 385
Q+ N +V+V GAA IG +SL LK+N V+ L LYD G +LS++ +
Sbjct: 21 QQNNYKVTVCGAAGGIGQPLSLLLKQNPLVTDLALYDIV-HTPGVAADLSHIDTKSKTAG 79
Query: 386 FIGDTNLEQAIHSSNLVVMVSRMPRKPGNTREQMLGANAPLIQRLCKAIAAQNQEAFVAI 565
FIG L ++ S++VV+ + +PRKPG TR+ + NA +I+ + +IA +A VAI
Sbjct: 80 FIGADQLGDSLKGSDVVVIPAGVPRKPGMTRDDLFNVNAGIIKDISNSIAKNCPKALVAI 139
Query: 566 STNPINYLIPFASTVMYKYGCYNPSKMFGITHIDTSRSRSFVAKALKINAQ 718
TNP+N +P A+ ++ K G Y+P ++FG++ +D R+R+F+ AL ++ Q
Sbjct: 140 ITNPVNTCVPIAAEILKKAGVYDPKRLFGVSTLDVVRARAFIGHALGVDPQ 190
>AE014297-2468|AAF55516.1| 336|Drosophila melanogaster CG7998-PA
protein.
Length = 336
Score = 126 bits (305), Expect = 2e-29
Identities = 64/171 (37%), Positives = 104/171 (60%)
Frame = +2
Query: 206 QKRNVQVSVIGAASDIGSYVSLFLKRNSKVSKLHLYDDDDRIKGTELELSNLPGGPSVSA 385
Q+ N +V+V GAA IG +SL LK+N V+ L LYD G +LS++ +
Sbjct: 21 QQNNYKVTVCGAAGGIGQPLSLLLKQNPLVTDLALYDIV-HTPGVAADLSHIDTKSKTAG 79
Query: 386 FIGDTNLEQAIHSSNLVVMVSRMPRKPGNTREQMLGANAPLIQRLCKAIAAQNQEAFVAI 565
FIG L ++ S++VV+ + +PRKPG TR+ + NA +I+ + +IA +A VAI
Sbjct: 80 FIGADQLGDSLKGSDVVVIPAGVPRKPGMTRDDLFNVNAGIIKDISNSIAKNCPKALVAI 139
Query: 566 STNPINYLIPFASTVMYKYGCYNPSKMFGITHIDTSRSRSFVAKALKINAQ 718
TNP+N +P A+ ++ K G Y+P ++FG++ +D R+R+F+ AL ++ Q
Sbjct: 140 ITNPVNTCVPIAAEILKKAGVYDPKRLFGVSTLDVVRARAFIGHALGVDPQ 190
>AY089402-1|AAL90140.1| 347|Drosophila melanogaster AT22817p
protein.
Length = 347
Score = 118 bits (284), Expect = 8e-27
Identities = 59/169 (34%), Positives = 103/169 (60%)
Frame = +2
Query: 212 RNVQVSVIGAASDIGSYVSLFLKRNSKVSKLHLYDDDDRIKGTELELSNLPGGPSVSAFI 391
R ++V+V+G+ IG +SL LK N ++S L LYD + G ++LS++ SV F
Sbjct: 26 RGLKVAVVGSVGGIGQPLSLLLKHNPQISTLSLYDIKNTT-GVGVDLSHINTRASVCPFE 84
Query: 392 GDTNLEQAIHSSNLVVMVSRMPRKPGNTREQMLGANAPLIQRLCKAIAAQNQEAFVAIST 571
G L++A+ +++VV+ + +PRKPG RE ++ NA + + A + A +A T
Sbjct: 85 GKNGLKKAMDKADIVVIPAGLPRKPGMKREDLVDVNASVACEVAFAASEVCPGAMLAFIT 144
Query: 572 NPINYLIPFASTVMYKYGCYNPSKMFGITHIDTSRSRSFVAKALKINAQ 718
NPIN ++P +T++ G Y+P+++FG+T +D R+++FVA L ++ Q
Sbjct: 145 NPINVIVPIVATILKAKGTYDPNRLFGVTTLDVVRAQTFVADILNVDPQ 193
>AE014296-2223|AAF49862.1| 347|Drosophila melanogaster CG10749-PA
protein.
Length = 347
Score = 118 bits (284), Expect = 8e-27
Identities = 59/169 (34%), Positives = 103/169 (60%)
Frame = +2
Query: 212 RNVQVSVIGAASDIGSYVSLFLKRNSKVSKLHLYDDDDRIKGTELELSNLPGGPSVSAFI 391
R ++V+V+G+ IG +SL LK N ++S L LYD + G ++LS++ SV F
Sbjct: 26 RGLKVAVVGSVGGIGQPLSLLLKHNPQISTLSLYDIKNTT-GVGVDLSHINTRASVCPFE 84
Query: 392 GDTNLEQAIHSSNLVVMVSRMPRKPGNTREQMLGANAPLIQRLCKAIAAQNQEAFVAIST 571
G L++A+ +++VV+ + +PRKPG RE ++ NA + + A + A +A T
Sbjct: 85 GKNGLKKAMDKADIVVIPAGLPRKPGMKREDLVDVNASVACEVAFAASEVCPGAMLAFIT 144
Query: 572 NPINYLIPFASTVMYKYGCYNPSKMFGITHIDTSRSRSFVAKALKINAQ 718
NPIN ++P +T++ G Y+P+++FG+T +D R+++FVA L ++ Q
Sbjct: 145 NPINVIVPIVATILKAKGTYDPNRLFGVTTLDVVRAQTFVADILNVDPQ 193
>AY075238-1|AAL68105.1| 349|Drosophila melanogaster AT19883p
protein.
Length = 349
Score = 114 bits (274), Expect = 1e-25
Identities = 55/167 (32%), Positives = 101/167 (60%)
Frame = +2
Query: 212 RNVQVSVIGAASDIGSYVSLFLKRNSKVSKLHLYDDDDRIKGTELELSNLPGGPSVSAFI 391
R ++V+V+GA IG +SL L+R + +L L+D + +KG +LS++ V F
Sbjct: 21 RTLKVAVVGAGGGIGQPLSLLLRRCPGIDELALHDLSE-MKGIATDLSHISQTGKVIGFT 79
Query: 392 GDTNLEQAIHSSNLVVMVSRMPRKPGNTREQMLGANAPLIQRLCKAIAAQNQEAFVAIST 571
G+ LE A+ +++VV+ + MPR PG R+ ++ AN + ++ AI+ + A +A T
Sbjct: 80 GEKELESAVSGADVVVVAAGMPRLPGMQRDHLMAANGNVAVKVATAISNASPRAHLAFIT 139
Query: 572 NPINYLIPFASTVMYKYGCYNPSKMFGITHIDTSRSRSFVAKALKIN 712
NP+N ++P A+ V+ +G ++ ++FGIT +D RS+ F+ ++ I+
Sbjct: 140 NPVNMIVPAAAEVLMAHGTFDSRRLFGITTLDVVRSKKFIGDSMNIS 186
>AE014296-2222|AAF49863.1| 349|Drosophila melanogaster CG10748-PA
protein.
Length = 349
Score = 114 bits (274), Expect = 1e-25
Identities = 55/167 (32%), Positives = 101/167 (60%)
Frame = +2
Query: 212 RNVQVSVIGAASDIGSYVSLFLKRNSKVSKLHLYDDDDRIKGTELELSNLPGGPSVSAFI 391
R ++V+V+GA IG +SL L+R + +L L+D + +KG +LS++ V F
Sbjct: 21 RTLKVAVVGAGGGIGQPLSLLLRRCPGIDELALHDLSE-MKGIATDLSHISQTGKVIGFT 79
Query: 392 GDTNLEQAIHSSNLVVMVSRMPRKPGNTREQMLGANAPLIQRLCKAIAAQNQEAFVAIST 571
G+ LE A+ +++VV+ + MPR PG R+ ++ AN + ++ AI+ + A +A T
Sbjct: 80 GEKELESAVSGADVVVVAAGMPRLPGMQRDHLMAANGNVAVKVATAISNASPRAHLAFIT 139
Query: 572 NPINYLIPFASTVMYKYGCYNPSKMFGITHIDTSRSRSFVAKALKIN 712
NP+N ++P A+ V+ +G ++ ++FGIT +D RS+ F+ ++ I+
Sbjct: 140 NPVNMIVPAAAEVLMAHGTFDSRRLFGITTLDVVRSKKFIGDSMNIS 186
>X59449-1|CAA42068.1| 883|Drosophila melanogaster dynamin protein.
Length = 883
Score = 29.1 bits (62), Expect = 6.4
Identities = 14/63 (22%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Frame = +2
Query: 182 LKKNTLILQKRNVQVSVIGAASDIGSYVSLFLKRNSKVSKLH--LYDDDDRIKGTELELS 355
L + + I+ +R + + +I ++ G ++ + K+ S ++ + D+ DR+ G+ +S
Sbjct: 52 LPRGSGIVTRRPLILQLINGVTEYGEFLHIKGKKFSSFDEIRKEIEDETDRVTGSNKGIS 111
Query: 356 NLP 364
N+P
Sbjct: 112 NIP 114
>X59448-1|CAA42067.1| 836|Drosophila melanogaster dynamin protein.
Length = 836
Score = 29.1 bits (62), Expect = 6.4
Identities = 14/63 (22%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Frame = +2
Query: 182 LKKNTLILQKRNVQVSVIGAASDIGSYVSLFLKRNSKVSKLH--LYDDDDRIKGTELELS 355
L + + I+ +R + + +I ++ G ++ + K+ S ++ + D+ DR+ G+ +S
Sbjct: 52 LPRGSGIVTRRPLILQLINGVTEYGEFLHIKGKKFSSFDEIRKEIEDETDRVTGSNKGIS 111
Query: 356 NLP 364
N+P
Sbjct: 112 NIP 114
>X59435-1|CAA42061.1| 836|Drosophila melanogaster dynamnin-like
protein protein.
Length = 836
Score = 29.1 bits (62), Expect = 6.4
Identities = 14/63 (22%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Frame = +2
Query: 182 LKKNTLILQKRNVQVSVIGAASDIGSYVSLFLKRNSKVSKLH--LYDDDDRIKGTELELS 355
L + + I+ +R + + +I ++ G ++ + K+ S ++ + D+ DR+ G+ +S
Sbjct: 52 LPRGSGIVTRRPLILQLINGVTEYGEFLHIKGKKFSSFDEIRKEIEDETDRVTGSNKGIS 111
Query: 356 NLP 364
N+P
Sbjct: 112 NIP 114
>BT010049-1|AAQ22518.1| 877|Drosophila melanogaster LD21622p
protein.
Length = 877
Score = 29.1 bits (62), Expect = 6.4
Identities = 14/63 (22%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Frame = +2
Query: 182 LKKNTLILQKRNVQVSVIGAASDIGSYVSLFLKRNSKVSKLH--LYDDDDRIKGTELELS 355
L + + I+ +R + + +I ++ G ++ + K+ S ++ + D+ DR+ G+ +S
Sbjct: 52 LPRGSGIVTRRPLILQLINGVTEYGEFLHIKGKKFSSFDEIRKEIEDETDRVTGSNKGIS 111
Query: 356 NLP 364
N+P
Sbjct: 112 NIP 114
>AE014298-2280|ABI30984.1| 830|Drosophila melanogaster CG18102-PI,
isoform I protein.
Length = 830
Score = 29.1 bits (62), Expect = 6.4
Identities = 14/63 (22%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Frame = +2
Query: 182 LKKNTLILQKRNVQVSVIGAASDIGSYVSLFLKRNSKVSKLH--LYDDDDRIKGTELELS 355
L + + I+ +R + + +I ++ G ++ + K+ S ++ + D+ DR+ G+ +S
Sbjct: 52 LPRGSGIVTRRPLILQLINGVTEYGEFLHIKGKKFSSFDEIRKEIEDETDRVTGSNKGIS 111
Query: 356 NLP 364
N+P
Sbjct: 112 NIP 114
>AE014298-2279|ABI30983.1| 830|Drosophila melanogaster CG18102-PH,
isoform H protein.
Length = 830
Score = 29.1 bits (62), Expect = 6.4
Identities = 14/63 (22%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Frame = +2
Query: 182 LKKNTLILQKRNVQVSVIGAASDIGSYVSLFLKRNSKVSKLH--LYDDDDRIKGTELELS 355
L + + I+ +R + + +I ++ G ++ + K+ S ++ + D+ DR+ G+ +S
Sbjct: 52 LPRGSGIVTRRPLILQLINGVTEYGEFLHIKGKKFSSFDEIRKEIEDETDRVTGSNKGIS 111
Query: 356 NLP 364
N+P
Sbjct: 112 NIP 114
>AE014298-2278|AAS65369.1| 830|Drosophila melanogaster CG18102-PE,
isoform E protein.
Length = 830
Score = 29.1 bits (62), Expect = 6.4
Identities = 14/63 (22%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Frame = +2
Query: 182 LKKNTLILQKRNVQVSVIGAASDIGSYVSLFLKRNSKVSKLH--LYDDDDRIKGTELELS 355
L + + I+ +R + + +I ++ G ++ + K+ S ++ + D+ DR+ G+ +S
Sbjct: 52 LPRGSGIVTRRPLILQLINGVTEYGEFLHIKGKKFSSFDEIRKEIEDETDRVTGSNKGIS 111
Query: 356 NLP 364
N+P
Sbjct: 112 NIP 114
>AE014298-2277|AAN09373.1| 830|Drosophila melanogaster CG18102-PC,
isoform C protein.
Length = 830
Score = 29.1 bits (62), Expect = 6.4
Identities = 14/63 (22%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Frame = +2
Query: 182 LKKNTLILQKRNVQVSVIGAASDIGSYVSLFLKRNSKVSKLH--LYDDDDRIKGTELELS 355
L + + I+ +R + + +I ++ G ++ + K+ S ++ + D+ DR+ G+ +S
Sbjct: 52 LPRGSGIVTRRPLILQLINGVTEYGEFLHIKGKKFSSFDEIRKEIEDETDRVTGSNKGIS 111
Query: 356 NLP 364
N+P
Sbjct: 112 NIP 114
>AE014298-2276|AAN09372.1| 830|Drosophila melanogaster CG18102-PB,
isoform B protein.
Length = 830
Score = 29.1 bits (62), Expect = 6.4
Identities = 14/63 (22%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Frame = +2
Query: 182 LKKNTLILQKRNVQVSVIGAASDIGSYVSLFLKRNSKVSKLH--LYDDDDRIKGTELELS 355
L + + I+ +R + + +I ++ G ++ + K+ S ++ + D+ DR+ G+ +S
Sbjct: 52 LPRGSGIVTRRPLILQLINGVTEYGEFLHIKGKKFSSFDEIRKEIEDETDRVTGSNKGIS 111
Query: 356 NLP 364
N+P
Sbjct: 112 NIP 114
>AE014298-2275|AAS65368.1| 830|Drosophila melanogaster CG18102-PA,
isoform A protein.
Length = 830
Score = 29.1 bits (62), Expect = 6.4
Identities = 14/63 (22%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Frame = +2
Query: 182 LKKNTLILQKRNVQVSVIGAASDIGSYVSLFLKRNSKVSKLH--LYDDDDRIKGTELELS 355
L + + I+ +R + + +I ++ G ++ + K+ S ++ + D+ DR+ G+ +S
Sbjct: 52 LPRGSGIVTRRPLILQLINGVTEYGEFLHIKGKKFSSFDEIRKEIEDETDRVTGSNKGIS 111
Query: 356 NLP 364
N+P
Sbjct: 112 NIP 114
>AE014298-2274|AAS65367.1| 877|Drosophila melanogaster CG18102-PG,
isoform G protein.
Length = 877
Score = 29.1 bits (62), Expect = 6.4
Identities = 14/63 (22%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Frame = +2
Query: 182 LKKNTLILQKRNVQVSVIGAASDIGSYVSLFLKRNSKVSKLH--LYDDDDRIKGTELELS 355
L + + I+ +R + + +I ++ G ++ + K+ S ++ + D+ DR+ G+ +S
Sbjct: 52 LPRGSGIVTRRPLILQLINGVTEYGEFLHIKGKKFSSFDEIRKEIEDETDRVTGSNKGIS 111
Query: 356 NLP 364
N+P
Sbjct: 112 NIP 114
>AE014298-2273|AAS65366.1| 877|Drosophila melanogaster CG18102-PF,
isoform F protein.
Length = 877
Score = 29.1 bits (62), Expect = 6.4
Identities = 14/63 (22%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Frame = +2
Query: 182 LKKNTLILQKRNVQVSVIGAASDIGSYVSLFLKRNSKVSKLH--LYDDDDRIKGTELELS 355
L + + I+ +R + + +I ++ G ++ + K+ S ++ + D+ DR+ G+ +S
Sbjct: 52 LPRGSGIVTRRPLILQLINGVTEYGEFLHIKGKKFSSFDEIRKEIEDETDRVTGSNKGIS 111
Query: 356 NLP 364
N+P
Sbjct: 112 NIP 114
>AE014298-2272|AAF48536.2| 877|Drosophila melanogaster CG18102-PD,
isoform D protein.
Length = 877
Score = 29.1 bits (62), Expect = 6.4
Identities = 14/63 (22%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Frame = +2
Query: 182 LKKNTLILQKRNVQVSVIGAASDIGSYVSLFLKRNSKVSKLH--LYDDDDRIKGTELELS 355
L + + I+ +R + + +I ++ G ++ + K+ S ++ + D+ DR+ G+ +S
Sbjct: 52 LPRGSGIVTRRPLILQLINGVTEYGEFLHIKGKKFSSFDEIRKEIEDETDRVTGSNKGIS 111
Query: 356 NLP 364
N+P
Sbjct: 112 NIP 114
>AY119579-1|AAM50233.1| 634|Drosophila melanogaster LD08709p
protein.
Length = 634
Score = 28.7 bits (61), Expect = 8.4
Identities = 13/33 (39%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Frame = -3
Query: 507 NGALAPSICSLVLPGLRGIRETIT-TKFDEWMA 412
+GAL PSI ++P L G +T++ T W+A
Sbjct: 519 HGALCPSIVGTLMPALDGNMDTVSVTILSRWLA 551
>AE014296-984|AAF50757.1| 634|Drosophila melanogaster CG10583-PA
protein.
Length = 634
Score = 28.7 bits (61), Expect = 8.4
Identities = 13/33 (39%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Frame = -3
Query: 507 NGALAPSICSLVLPGLRGIRETIT-TKFDEWMA 412
+GAL PSI ++P L G +T++ T W+A
Sbjct: 519 HGALCPSIVGTLMPALDGNMDTVSVTILSRWLA 551
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,631,424
Number of Sequences: 53049
Number of extensions: 626892
Number of successful extensions: 1391
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1352
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1384
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3211306956
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -