Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte4m01
         (410 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          26   0.17 
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    23   1.5  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    23   1.5  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   2.7  
AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450 ...    21   4.7  
DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc gr...    20   8.2  

>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 25.8 bits (54), Expect = 0.17
 Identities = 9/23 (39%), Positives = 16/23 (69%)
 Frame = -3

Query: 363 LHKK*VNFNIPSIQNHIKIRTDV 295
           +HKK  NF +P IQ+++ +  D+
Sbjct: 305 VHKKCSNFTLPEIQHNLDVLVDM 327


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 1.5
 Identities = 11/27 (40%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
 Frame = -3

Query: 408  FFLYN-LFIFTTFILTLHKK*VNFNIP 331
            FF+ N LF+   F+LTL K  ++   P
Sbjct: 1272 FFMMNALFVLIVFLLTLKKDYLHIKWP 1298


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 1.5
 Identities = 11/27 (40%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
 Frame = -3

Query: 408  FFLYN-LFIFTTFILTLHKK*VNFNIP 331
            FF+ N LF+   F+LTL K  ++   P
Sbjct: 1272 FFMMNALFVLIVFLLTLKKDYLHIKWP 1298


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.8 bits (44), Expect = 2.7
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = -2

Query: 127  RCASAKYYTHE*YYSDYV 74
            +C S +YY HE   S YV
Sbjct: 1206 KCDSGQYYPHESCSSFYV 1223


>AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q7 protein.
          Length = 505

 Score = 21.0 bits (42), Expect = 4.7
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = -2

Query: 289 KKLRIISEMCYKQTLNV 239
           K + ++ E CYK  +NV
Sbjct: 159 KLVEVLKEECYKPFINV 175


>DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc
           growth factor 4 protein.
          Length = 431

 Score = 20.2 bits (40), Expect = 8.2
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = -2

Query: 109 YYTHE*YYSDYVGKFNKHY 53
           YY  + Y+ D  GKF+ ++
Sbjct: 24  YYNSKAYFRDGQGKFDVNF 42


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 80,302
Number of Sequences: 336
Number of extensions: 1482
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  8963165
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)