Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte4m01
(410 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL031633-25|CAI06057.1| 354|Caenorhabditis elegans Hypothetical... 31 0.43
AL031633-2|CAD60426.1| 388|Caenorhabditis elegans Hypothetical ... 31 0.43
AL031633-1|CAA21019.3| 386|Caenorhabditis elegans Hypothetical ... 31 0.43
Z48584-8|CAK55179.1| 435|Caenorhabditis elegans Hypothetical pr... 29 0.99
Z48584-7|CAH04712.1| 448|Caenorhabditis elegans Hypothetical pr... 29 0.99
Z48584-5|CAD57717.1| 501|Caenorhabditis elegans Hypothetical pr... 29 0.99
Z48584-4|CAD57716.1| 536|Caenorhabditis elegans Hypothetical pr... 29 0.99
Z48584-3|CAD57715.1| 524|Caenorhabditis elegans Hypothetical pr... 29 0.99
Z48584-2|CAA88477.2| 481|Caenorhabditis elegans Hypothetical pr... 29 0.99
Z75554-11|CAA99961.1| 301|Caenorhabditis elegans Hypothetical p... 29 1.3
AF100659-7|AAC68967.1| 688|Caenorhabditis elegans Hypothetical ... 28 2.3
AF026213-6|AAB71307.1| 655|Caenorhabditis elegans Temporarily a... 27 5.3
U58755-10|AAB00699.1| 2761|Caenorhabditis elegans Hypothetical p... 26 9.2
>AL031633-25|CAI06057.1| 354|Caenorhabditis elegans Hypothetical
protein Y39A1A.1c protein.
Length = 354
Score = 30.7 bits (66), Expect = 0.43
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = -2
Query: 124 CASAKYYTHE*YYSDYVGKFNKHYFCY 44
CA A Y+ HE +Y D G F H+ Y
Sbjct: 311 CADATYWRHE-FYKDNTGNFTSHFGSY 336
>AL031633-2|CAD60426.1| 388|Caenorhabditis elegans Hypothetical
protein Y39A1A.1b protein.
Length = 388
Score = 30.7 bits (66), Expect = 0.43
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = -2
Query: 124 CASAKYYTHE*YYSDYVGKFNKHYFCY 44
CA A Y+ HE +Y D G F H+ Y
Sbjct: 345 CADATYWRHE-FYKDNTGNFTSHFGSY 370
>AL031633-1|CAA21019.3| 386|Caenorhabditis elegans Hypothetical
protein Y39A1A.1a protein.
Length = 386
Score = 30.7 bits (66), Expect = 0.43
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = -2
Query: 124 CASAKYYTHE*YYSDYVGKFNKHYFCY 44
CA A Y+ HE +Y D G F H+ Y
Sbjct: 343 CADATYWRHE-FYKDNTGNFTSHFGSY 368
>Z48584-8|CAK55179.1| 435|Caenorhabditis elegans Hypothetical
protein ZK1321.2f protein.
Length = 435
Score = 29.5 bits (63), Expect = 0.99
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +2
Query: 287 FQWTSVLIFMWF*IEGILKFTYFLCKVKIKVVKIN 391
F W ++ +WF IE IL+F CKV +N
Sbjct: 225 FFWIELMCILWFTIELILRFISCPCKVTFATSVLN 259
>Z48584-7|CAH04712.1| 448|Caenorhabditis elegans Hypothetical
protein ZK1321.2e protein.
Length = 448
Score = 29.5 bits (63), Expect = 0.99
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +2
Query: 287 FQWTSVLIFMWF*IEGILKFTYFLCKVKIKVVKIN 391
F W ++ +WF IE IL+F CKV +N
Sbjct: 238 FFWIELMCILWFTIELILRFISCPCKVTFATSVLN 272
>Z48584-5|CAD57717.1| 501|Caenorhabditis elegans Hypothetical
protein ZK1321.2d protein.
Length = 501
Score = 29.5 bits (63), Expect = 0.99
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +2
Query: 287 FQWTSVLIFMWF*IEGILKFTYFLCKVKIKVVKIN 391
F W ++ +WF IE IL+F CKV +N
Sbjct: 291 FFWIELMCILWFTIELILRFISCPCKVTFATSVLN 325
>Z48584-4|CAD57716.1| 536|Caenorhabditis elegans Hypothetical
protein ZK1321.2c protein.
Length = 536
Score = 29.5 bits (63), Expect = 0.99
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +2
Query: 287 FQWTSVLIFMWF*IEGILKFTYFLCKVKIKVVKIN 391
F W ++ +WF IE IL+F CKV +N
Sbjct: 326 FFWIELMCILWFTIELILRFISCPCKVTFATSVLN 360
>Z48584-3|CAD57715.1| 524|Caenorhabditis elegans Hypothetical
protein ZK1321.2b protein.
Length = 524
Score = 29.5 bits (63), Expect = 0.99
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +2
Query: 287 FQWTSVLIFMWF*IEGILKFTYFLCKVKIKVVKIN 391
F W ++ +WF IE IL+F CKV +N
Sbjct: 314 FFWIELMCILWFTIELILRFISCPCKVTFATSVLN 348
>Z48584-2|CAA88477.2| 481|Caenorhabditis elegans Hypothetical
protein ZK1321.2a protein.
Length = 481
Score = 29.5 bits (63), Expect = 0.99
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +2
Query: 287 FQWTSVLIFMWF*IEGILKFTYFLCKVKIKVVKIN 391
F W ++ +WF IE IL+F CKV +N
Sbjct: 271 FFWIELMCILWFTIELILRFISCPCKVTFATSVLN 305
>Z75554-11|CAA99961.1| 301|Caenorhabditis elegans Hypothetical
protein ZC455.8a protein.
Length = 301
Score = 29.1 bits (62), Expect = 1.3
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = -2
Query: 313 KNKNRCPLKKLRIISEMCYKQTLNVYF 233
KNK L K+R I ++CY T+++Y+
Sbjct: 40 KNKPEYHLFKIRFIVDICYSLTVSIYY 66
>AF100659-7|AAC68967.1| 688|Caenorhabditis elegans Hypothetical
protein F58E2.4 protein.
Length = 688
Score = 28.3 bits (60), Expect = 2.3
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = -2
Query: 283 LRIISEMCYKQTLNVYFIHYHRSDDS 206
LR++ E+ K TLN++ I +H DS
Sbjct: 223 LRVLKELATKGTLNIFKIRFHSIADS 248
>AF026213-6|AAB71307.1| 655|Caenorhabditis elegans Temporarily
assigned gene nameprotein 123 protein.
Length = 655
Score = 27.1 bits (57), Expect = 5.3
Identities = 12/38 (31%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
Frame = +2
Query: 284 FFQWTSVLIFMWF*IEGILKF--TYFLCKVKIKVVKIN 391
+F +TS+ +FM+F + G + F TY+ + VK++
Sbjct: 618 YFSYTSIFVFMFFLMTGTIGFLATYYFVRKIYGSVKVD 655
>U58755-10|AAB00699.1| 2761|Caenorhabditis elegans Hypothetical
protein C34D4.14 protein.
Length = 2761
Score = 26.2 bits (55), Expect = 9.2
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = +1
Query: 7 VWHHTYSTCLCFSNKNNV 60
+W TYS C C +++ NV
Sbjct: 2170 IWEPTYSICYCSADQTNV 2187
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,281,478
Number of Sequences: 27780
Number of extensions: 114267
Number of successful extensions: 240
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 238
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 240
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 662437636
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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