Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte4l24
         (104 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    19   4.3  
AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly pro...    19   7.4  
AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellif...    19   7.4  
Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein RJP...    18   9.8  
AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice...    18   9.8  
AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.     18   9.8  

>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
            receptor protein.
          Length = 1040

 Score = 19.4 bits (38), Expect = 4.3
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = -3

Query: 69   ESQFVESTRTATQQLNSFAR 10
            +S+      TAT+QLN+ AR
Sbjct: 1008 QSKEARDNITATKQLNNKAR 1027


>AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly
           protein MRJP6 protein.
          Length = 437

 Score = 18.6 bits (36), Expect = 7.4
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = -1

Query: 59  LLKVRELPHN 30
           LLK  E+PHN
Sbjct: 168 LLKQIEIPHN 177


>AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellifera
           ORF for hypotheticalprotein. ).
          Length = 998

 Score = 18.6 bits (36), Expect = 7.4
 Identities = 6/12 (50%), Positives = 10/12 (83%)
 Frame = +2

Query: 68  STPRYLRVGVHT 103
           ++P  +RVG+HT
Sbjct: 360 NSPVDMRVGIHT 371


>Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein
           RJP57-2 protein.
          Length = 464

 Score = 18.2 bits (35), Expect = 9.8
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = -1

Query: 59  LLKVRELPHNSST 21
           LLK  E+PH+ +T
Sbjct: 169 LLKQVEIPHDVAT 181


>AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice
           variant B protein.
          Length = 810

 Score = 18.2 bits (35), Expect = 9.8
 Identities = 6/13 (46%), Positives = 10/13 (76%)
 Frame = -1

Query: 101 CVRLREDSEALKV 63
           CV+ ++  EALK+
Sbjct: 147 CVKKKDIEEALKI 159


>AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.
          Length = 602

 Score = 18.2 bits (35), Expect = 9.8
 Identities = 6/13 (46%), Positives = 10/13 (76%)
 Frame = -1

Query: 101 CVRLREDSEALKV 63
           CV+ ++  EALK+
Sbjct: 147 CVKKKDIEEALKI 159


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,833
Number of Sequences: 438
Number of extensions: 181
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 15
effective length of database: 139,773
effective search space used:  2655687
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)