Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte4l16
(769 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC1450.02 ||SPCC191.13|bromodomain protein|Schizosaccharomyces... 33 0.045
SPAC22F3.06c |lon1||Lon protease homolog Lon1|Schizosaccharomyce... 33 0.045
SPBC11C11.03 |ndc80|ndc10, tid3|spindle pole body protein Ndc80|... 31 0.14
SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyce... 31 0.18
SPBC725.06c |ppk31|mug25|serine/threonine protein kinase Ppk31 |... 29 0.73
SPAC14C4.02c |smc5|spr18|Smc5-6 complex SMC subunit Smc5 |Schizo... 28 1.7
SPAC458.02c |||mRNP complex |Schizosaccharomyces pombe|chr 1|||M... 27 3.0
SPBC25B2.02c |mam1|SPBC2G5.09c|M-factor transporter Mam1 |Schizo... 27 3.0
SPBC3B9.19 |mge1||GrpE domain chaperone protein|Schizosaccharomy... 27 3.0
SPAC22E12.17c |glo3||ARF GTPase activating protein|Schizosacchar... 27 3.9
SPAC20G8.10c ||SPAC3A12.01c|beclin family protein|Schizosaccharo... 27 3.9
SPCC830.05c |epl1||histone acetyltransferase complex subunit Epl... 27 3.9
SPAC27D7.14c |tpr1|SPAC637.02c|RNA polymerase II associated Paf1... 26 5.2
SPBC776.13 |cnd1||condensin subunit Cnd1|Schizosaccharomyces pom... 26 5.2
SPAC6G10.02c |tea3||cell end marker Tea3|Schizosaccharomyces pom... 26 6.8
SPBC17D11.08 |||WD repeat protein, human WDR68 family|Schizosacc... 26 6.8
SPCC162.08c |nup211||nuclear pore complex associated protein|Sch... 26 6.8
SPBC119.13c |prp31||U4/U6 x U5 tri-snRNP complex subunit Prp31|S... 25 9.0
SPAC1D4.12 |rad15|rhp3|transcription factor TFIIH complex subuni... 25 9.0
SPAC4H3.01 |||DNAJ domain protein Caj1/Djp1 type|Schizosaccharom... 25 9.0
SPAC10F6.09c |psm3|smc3|mitotic cohesin complex subunit Psm3|Sch... 25 9.0
>SPCC1450.02 ||SPCC191.13|bromodomain protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 578
Score = 33.1 bits (72), Expect = 0.045
Identities = 22/71 (30%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Frame = +2
Query: 458 QDIYHLQ-RQLKDAEQILATSLYQARQKLASIVKSRKRPVPSEELIKFAHRISASNAVSA 634
Q+++ Q +QL DAEQ A + +++QK AS R R S + S + ++
Sbjct: 180 QEVFERQLKQLPDAEQPAAAPVKKSKQKSASTAPPRTRRNSSVSSTSASVAASTAPKAAS 239
Query: 635 PLSWQPGDPRR 667
P G PRR
Sbjct: 240 PAVLPEGKPRR 250
>SPAC22F3.06c |lon1||Lon protease homolog Lon1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1067
Score = 33.1 bits (72), Expect = 0.045
Identities = 27/100 (27%), Positives = 55/100 (55%), Gaps = 6/100 (6%)
Frame = +2
Query: 314 VSAADHAQLTDLLLSKH--GELKKTLDLADEQ---AKIQQKMN-ELKAEVDSKDQDIYHL 475
VSAADH +L ++L + + L+K L + ++ A++Q K+N E++ ++ + ++ Y L
Sbjct: 393 VSAADHRELQEVLEATNIGDRLQKALYVLKKELLNAQLQHKINKEIEQKITQRHKE-YLL 451
Query: 476 QRQLKDAEQILATSLYQARQKLASIVKSRKRPVPSEELIK 595
QLK ++ L L +++ L + K R + + +K
Sbjct: 452 TEQLKQIKRELGQEL-DSKEALVTEFKKRTESLSMPDHVK 490
>SPBC11C11.03 |ndc80|ndc10, tid3|spindle pole body protein
Ndc80|Schizosaccharomyces pombe|chr 2|||Manual
Length = 624
Score = 31.5 bits (68), Expect = 0.14
Identities = 19/75 (25%), Positives = 36/75 (48%), Gaps = 2/75 (2%)
Frame = +2
Query: 395 DEQAKIQQKMNELKAEVDSKDQDIYHLQRQLKDAEQILATSLYQARQ--KLASIVKSRKR 568
DE + + ELKA + ++QD+Y+ LK + L + A + +++ R R
Sbjct: 247 DESPEESEPEKELKATFNQQNQDLYNQTEALKSTNEELINQIKSAEELDSAIQVLEERYR 306
Query: 569 PVPSEELIKFAHRIS 613
+ +E +KF +S
Sbjct: 307 TMQRDE-VKFQSAMS 320
>SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1957
Score = 31.1 bits (67), Expect = 0.18
Identities = 16/61 (26%), Positives = 34/61 (55%), Gaps = 3/61 (4%)
Frame = +2
Query: 395 DEQAKIQQKMNELK---AEVDSKDQDIYHLQRQLKDAEQILATSLYQARQKLASIVKSRK 565
D +A + NELK A +D KDQ++ +L+ Q+K+ +++ ++ + I+ +K
Sbjct: 466 DLRACLNSSSNELKEKSALIDKKDQELNNLREQIKEQKKVSESTQSSLQSLQRDILNEKK 525
Query: 566 R 568
+
Sbjct: 526 K 526
>SPBC725.06c |ppk31|mug25|serine/threonine protein kinase Ppk31
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1032
Score = 29.1 bits (62), Expect = 0.73
Identities = 18/59 (30%), Positives = 27/59 (45%)
Frame = +2
Query: 278 IIEVSIAPKPQKVSAADHAQLTDLLLSKHGELKKTLDLADEQAKIQQKMNELKAEVDSK 454
II I P V H +LTD LS++ E KK + ++ +QK L ++ K
Sbjct: 648 IIHHDIKPANMLVDETGHIRLTDFGLSENVEEKKEVYKLTKRMSFEQKHGNLYEQLQPK 706
>SPAC14C4.02c |smc5|spr18|Smc5-6 complex SMC subunit Smc5
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1065
Score = 27.9 bits (59), Expect = 1.7
Identities = 17/76 (22%), Positives = 43/76 (56%), Gaps = 2/76 (2%)
Frame = +2
Query: 362 HGELKKTLDLADEQAKIQQKMNELKAEVDSKDQDIYHLQRQLKDAEQILATSLYQARQKL 541
+ +L + +L +E+ K+Q+K+NE ++ + S+ DI R+ +D + I Q ++++
Sbjct: 637 NAQLSQLENLQNEERKLQEKVNEHESLL-SRTNDILSTLRKERDEKLIPIHEWQQLQERI 695
Query: 542 --ASIVKSRKRPVPSE 583
+++ ++ VP +
Sbjct: 696 EHQTLLLRQREKVPEQ 711
>SPAC458.02c |||mRNP complex |Schizosaccharomyces pombe|chr
1|||Manual
Length = 468
Score = 27.1 bits (57), Expect = 3.0
Identities = 33/119 (27%), Positives = 57/119 (47%), Gaps = 13/119 (10%)
Frame = +2
Query: 302 KPQKVSAADHAQLTDLLLSKHGELKKTLDLADEQ-------AKIQQKMNELKAEVDSKDQ 460
KP + + A H + + L +K E KK + E+ +Q+K EL+AE+D
Sbjct: 5 KPVRPNEALHKEALEELDAKINEAKKRFNEHKEKLGAIRGGGSLQEKNAELRAELD---- 60
Query: 461 DIYHLQRQLKDAEQILATSLYQARQKLASIVK---SRKRPVP--SE-ELIKFAHRISAS 619
+I + Q ++ ++Q L + + L VK + K+ VP SE EL K ++ A+
Sbjct: 61 NIRNAQAAIRSSKQTLINKVKAQDELLKKKVKELTAMKKTVPFKSEVELDKHVKQLQAA 119
>SPBC25B2.02c |mam1|SPBC2G5.09c|M-factor transporter Mam1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1336
Score = 27.1 bits (57), Expect = 3.0
Identities = 18/59 (30%), Positives = 27/59 (45%)
Frame = -2
Query: 225 VLKCDAIALYSLTAFFNINDMYYFLISYELDKRPPNAATLGISCIKNATMYVVTTFNVY 49
++ D I YS+ +FF N S+E KR +LG + I N+ +Y V Y
Sbjct: 967 IVNLDTIKGYSVLSFFRENHKNSLRKSWEAFKRRAFWTSLGFA-INNSLLYFVRALLFY 1024
>SPBC3B9.19 |mge1||GrpE domain chaperone protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 223
Score = 27.1 bits (57), Expect = 3.0
Identities = 8/30 (26%), Positives = 23/30 (76%)
Frame = +2
Query: 407 KIQQKMNELKAEVDSKDQDIYHLQRQLKDA 496
++Q K++ELK++ ++KD+++ L+ ++ +
Sbjct: 55 ELQSKLSELKSKYEAKDKEVAELKGSIRQS 84
>SPAC22E12.17c |glo3||ARF GTPase activating
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 486
Score = 26.6 bits (56), Expect = 3.9
Identities = 20/88 (22%), Positives = 36/88 (40%), Gaps = 2/88 (2%)
Frame = +2
Query: 317 SAADHAQLTDLLLSK--HGELKKTLDLADEQAKIQQKMNELKAEVDSKDQDIYHLQRQLK 490
SAAD D S +KK+ D D++ + + + E KD+ + + +
Sbjct: 150 SAADTTNEDDDFFSAWDKASVKKSDDNLDDKTDLASTSSSVVVESGEKDEPVVVTEEKTM 209
Query: 491 DAEQILATSLYQARQKLASIVKSRKRPV 574
+ S + K +SI +R RP+
Sbjct: 210 VSPPSRPDSTSTTKSKTSSISSARARPI 237
>SPAC20G8.10c ||SPAC3A12.01c|beclin family
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 464
Score = 26.6 bits (56), Expect = 3.9
Identities = 15/61 (24%), Positives = 37/61 (60%), Gaps = 3/61 (4%)
Frame = +2
Query: 317 SAADHAQLTDLLLSKHGELKKTLDLADEQAKIQQKMNEL---KAEVDSKDQDIYHLQRQL 487
+AA +++ +L+ + + +K +++DE K+Q+ + EL K +V +++Q+ Y+ Q
Sbjct: 185 TAALDSEIDELMKQINEKEEKIEEISDETDKLQKLLRELDEEKEKVYAEEQEFYNNLNQF 244
Query: 488 K 490
+
Sbjct: 245 Q 245
>SPCC830.05c |epl1||histone acetyltransferase complex subunit Epl1
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 557
Score = 26.6 bits (56), Expect = 3.9
Identities = 9/38 (23%), Positives = 26/38 (68%)
Frame = +2
Query: 395 DEQAKIQQKMNELKAEVDSKDQDIYHLQRQLKDAEQIL 508
DE+A +Q+ + +++ V+ ++++ HLQ+ + +A + +
Sbjct: 34 DEEASLQRTVPLVESGVEKEEEEEKHLQQVINEAHEAI 71
>SPAC27D7.14c |tpr1|SPAC637.02c|RNA polymerase II associated Paf1
complex subunit Tpr1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1039
Score = 26.2 bits (55), Expect = 5.2
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = +2
Query: 347 LLLSKHGELKKTLDLADEQAKIQQKMNELKAEVDSKDQ 460
L +++ LKK DL DEQ + + E +DSK +
Sbjct: 99 LSMAREAMLKKDTDLRDEQLRNVRTYLEAANNIDSKSE 136
>SPBC776.13 |cnd1||condensin subunit Cnd1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1158
Score = 26.2 bits (55), Expect = 5.2
Identities = 15/64 (23%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Frame = +2
Query: 410 IQQKMNELKAEVDSK--DQDIYHLQRQLKDAEQILATSLYQARQKLASIVKSRKRPVPSE 583
I++++N L+ + K D ++ + L+DA I ++ L + + VP+E
Sbjct: 450 IEEQLNSLQPKQQEKVVDSELEVDENLLEDATMIQDDESHEGESHLENSLSEYVDSVPAE 509
Query: 584 ELIK 595
E++K
Sbjct: 510 EIVK 513
>SPAC6G10.02c |tea3||cell end marker Tea3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1125
Score = 25.8 bits (54), Expect = 6.8
Identities = 14/50 (28%), Positives = 27/50 (54%)
Frame = +2
Query: 395 DEQAKIQQKMNELKAEVDSKDQDIYHLQRQLKDAEQILATSLYQARQKLA 544
DE++ +QQK L+ E ++ ++ +LQ + + E L S+ A+ A
Sbjct: 800 DEKSTLQQKCLNLQYEYENVRIELENLQSRALELESALEQSVSDAKYSKA 849
>SPBC17D11.08 |||WD repeat protein, human WDR68
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 435
Score = 25.8 bits (54), Expect = 6.8
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +1
Query: 469 SPSKTIERCRTNSGYITVSSSTETC 543
+P + + C+T+ YI VSS TC
Sbjct: 167 APLTSFDWCKTDPSYIVVSSLDTTC 191
>SPCC162.08c |nup211||nuclear pore complex associated
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1837
Score = 25.8 bits (54), Expect = 6.8
Identities = 14/38 (36%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Frame = +2
Query: 344 DLLLSKHGELKKTLDLADEQAK-IQQKMNELKAEVDSK 454
D L K EL+K ++ + +Q ++NELKAE+ +K
Sbjct: 1284 DAKLGKIQELEKEVEKLNASLNPLQTEINELKAEIGAK 1321
>SPBC119.13c |prp31||U4/U6 x U5 tri-snRNP complex subunit
Prp31|Schizosaccharomyces pombe|chr 2|||Manual
Length = 518
Score = 25.4 bits (53), Expect = 9.0
Identities = 14/59 (23%), Positives = 28/59 (47%)
Frame = +2
Query: 368 ELKKTLDLADEQAKIQQKMNELKAEVDSKDQDIYHLQRQLKDAEQILATSLYQARQKLA 544
EL+ LD+ Q+ +E+ + + +++IY L + + I T Y+ +K A
Sbjct: 48 ELENDLDITKISDSAQKLPSEVANKFNDNNENIYQLLNSTRLRDIIEGTEKYKGTEKQA 106
>SPAC1D4.12 |rad15|rhp3|transcription factor TFIIH complex subunit
Rad15|Schizosaccharomyces pombe|chr 1|||Manual
Length = 772
Score = 25.4 bits (53), Expect = 9.0
Identities = 14/30 (46%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Frame = +2
Query: 410 IQQKMNELKAEVDSKDQDIYH-LQRQLKDA 496
++QK+NE+K K QD Y L R L+DA
Sbjct: 265 LEQKVNEVKQSDSKKLQDEYQKLVRGLQDA 294
>SPAC4H3.01 |||DNAJ domain protein Caj1/Djp1
type|Schizosaccharomyces pombe|chr 1|||Manual
Length = 392
Score = 25.4 bits (53), Expect = 9.0
Identities = 22/96 (22%), Positives = 42/96 (43%), Gaps = 5/96 (5%)
Frame = +2
Query: 395 DEQAKIQQKMNELKAEVDSKDQDIYHLQRQLKDAEQILATSLYQARQKLASIVKSR---- 562
D + I Q M +L+ + + + + +L +IL S AR + +++
Sbjct: 273 DAKLSIDQ-MQKLEDKGEDQASAEERAKLELDITGKILRASWCGARYDIQGVLREACSNL 331
Query: 563 -KRPVPSEELIKFAHRISASNAVSAPLSWQPGDPRR 667
K+ VP+E +K AH + + + + P DP R
Sbjct: 332 LKKRVPTELRLKRAHALLEIGTIFSNVEADPDDPNR 367
>SPAC10F6.09c |psm3|smc3|mitotic cohesin complex subunit
Psm3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1194
Score = 25.4 bits (53), Expect = 9.0
Identities = 28/113 (24%), Positives = 50/113 (44%), Gaps = 8/113 (7%)
Frame = +2
Query: 335 QLTDLLLSKHGELKKTLDLADEQA--KIQQKMNELKAEVDSKDQDIYHLQRQLKDAEQIL 508
Q DL E+ + LD D +A + ++ L E D+ ++ H++ + E L
Sbjct: 763 QANDLKSELSSEMDE-LDPKDVEALKSLSGQIENLSHEFDAIIKERAHIEARKTALEYEL 821
Query: 509 ATSLYQARQKLASIVKSRKRPVPSE------ELIKFAHRISASNAVSAPLSWQ 649
T+LY R L + + S R SE L+K+ +++ + S+ L Q
Sbjct: 822 NTNLYLRRNPLKAEIGSDNRIDESELNSVKRSLLKYENKLQIIKSSSSGLEEQ 874
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,068,283
Number of Sequences: 5004
Number of extensions: 60804
Number of successful extensions: 183
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 174
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 183
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 369323696
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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